co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G20780

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
2	GO:0000169: activation of MAPK activity involved in osmosensory signaling pathway	0.00E+00
3	GO:0048227: plasma membrane to endosome transport	0.00E+00
4	GO:0060548: negative regulation of cell death	1.03E-05
5	GO:0051603: proteolysis involved in cellular protein catabolic process	3.03E-05
6	GO:0010200: response to chitin	5.62E-05
7	GO:0006680: glucosylceramide catabolic process	1.08E-04
8	GO:0006805: xenobiotic metabolic process	1.08E-04
9	GO:0080136: priming of cellular response to stress	1.08E-04
10	GO:0034214: protein hexamerization	1.08E-04
11	GO:0000266: mitochondrial fission	1.96E-04
12	GO:0019441: tryptophan catabolic process to kynurenine	2.52E-04
13	GO:0006212: uracil catabolic process	2.52E-04
14	GO:0007584: response to nutrient	2.52E-04
15	GO:0019483: beta-alanine biosynthetic process	2.52E-04
16	GO:1902000: homogentisate catabolic process	2.52E-04
17	GO:0009072: aromatic amino acid family metabolic process	4.19E-04
18	GO:1900140: regulation of seedling development	4.19E-04
19	GO:0010359: regulation of anion channel activity	4.19E-04
20	GO:0061158: 3'-UTR-mediated mRNA destabilization	4.19E-04
21	GO:0046777: protein autophosphorylation	4.88E-04
22	GO:0001676: long-chain fatty acid metabolic process	6.01E-04
23	GO:2000114: regulation of establishment of cell polarity	6.01E-04
24	GO:0006624: vacuolar protein processing	6.01E-04
25	GO:0048194: Golgi vesicle budding	6.01E-04
26	GO:2001289: lipid X metabolic process	6.01E-04
27	GO:0070301: cellular response to hydrogen peroxide	6.01E-04
28	GO:0009399: nitrogen fixation	6.01E-04
29	GO:0072583: clathrin-dependent endocytosis	6.01E-04
30	GO:0010188: response to microbial phytotoxin	7.98E-04
31	GO:0006878: cellular copper ion homeostasis	7.98E-04
32	GO:0006542: glutamine biosynthetic process	7.98E-04
33	GO:0048830: adventitious root development	7.98E-04
34	GO:0010363: regulation of plant-type hypersensitive response	7.98E-04
35	GO:0010107: potassium ion import	7.98E-04
36	GO:2000038: regulation of stomatal complex development	7.98E-04
37	GO:0042991: transcription factor import into nucleus	7.98E-04
38	GO:0030308: negative regulation of cell growth	1.01E-03
39	GO:0010150: leaf senescence	1.19E-03
40	GO:0002238: response to molecule of fungal origin	1.23E-03
41	GO:0009759: indole glucosinolate biosynthetic process	1.23E-03
42	GO:0006751: glutathione catabolic process	1.23E-03
43	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	1.23E-03
44	GO:1902456: regulation of stomatal opening	1.23E-03
45	GO:1900425: negative regulation of defense response to bacterium	1.23E-03
46	GO:0042742: defense response to bacterium	1.28E-03
47	GO:0007166: cell surface receptor signaling pathway	1.41E-03
48	GO:2000037: regulation of stomatal complex patterning	1.47E-03
49	GO:0000911: cytokinesis by cell plate formation	1.47E-03
50	GO:0050790: regulation of catalytic activity	1.73E-03
51	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	1.73E-03
52	GO:0006955: immune response	1.73E-03
53	GO:0043090: amino acid import	1.73E-03
54	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.73E-03
55	GO:0016559: peroxisome fission	2.00E-03
56	GO:0009819: drought recovery	2.00E-03
57	GO:0048766: root hair initiation	2.00E-03
58	GO:0006605: protein targeting	2.00E-03
59	GO:0043562: cellular response to nitrogen levels	2.28E-03
60	GO:0006002: fructose 6-phosphate metabolic process	2.28E-03
61	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	2.28E-03
62	GO:0010120: camalexin biosynthetic process	2.28E-03
63	GO:0006631: fatty acid metabolic process	2.36E-03
64	GO:0009723: response to ethylene	2.48E-03
65	GO:0090333: regulation of stomatal closure	2.57E-03
66	GO:0008202: steroid metabolic process	2.88E-03
67	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	2.88E-03
68	GO:0043069: negative regulation of programmed cell death	3.20E-03
69	GO:0009641: shade avoidance	3.20E-03
70	GO:0019538: protein metabolic process	3.20E-03
71	GO:0009809: lignin biosynthetic process	3.43E-03
72	GO:0030148: sphingolipid biosynthetic process	3.53E-03
73	GO:0009684: indoleacetic acid biosynthetic process	3.53E-03
74	GO:0009682: induced systemic resistance	3.53E-03
75	GO:0052544: defense response by callose deposition in cell wall	3.53E-03
76	GO:0010105: negative regulation of ethylene-activated signaling pathway	3.87E-03
77	GO:0010229: inflorescence development	4.23E-03
78	GO:0006807: nitrogen compound metabolic process	4.23E-03
79	GO:0009626: plant-type hypersensitive response	4.31E-03
80	GO:0010053: root epidermal cell differentiation	4.96E-03
81	GO:0000162: tryptophan biosynthetic process	5.35E-03
82	GO:0034976: response to endoplasmic reticulum stress	5.35E-03
83	GO:0006979: response to oxidative stress	5.55E-03
84	GO:0016575: histone deacetylation	6.15E-03
85	GO:0007005: mitochondrion organization	6.99E-03
86	GO:0031348: negative regulation of defense response	6.99E-03
87	GO:0010091: trichome branching	7.87E-03
88	GO:0042147: retrograde transport, endosome to Golgi	8.32E-03
89	GO:0050832: defense response to fungus	8.59E-03
90	GO:0010051: xylem and phloem pattern formation	8.79E-03
91	GO:0010118: stomatal movement	8.79E-03
92	GO:0009738: abscisic acid-activated signaling pathway	8.81E-03
93	GO:0006508: proteolysis	9.11E-03
94	GO:0006662: glycerol ether metabolic process	9.26E-03
95	GO:0008360: regulation of cell shape	9.26E-03
96	GO:0006623: protein targeting to vacuole	1.02E-02
97	GO:0010183: pollen tube guidance	1.02E-02
98	GO:0048825: cotyledon development	1.02E-02
99	GO:0009651: response to salt stress	1.06E-02
100	GO:0002229: defense response to oomycetes	1.07E-02
101	GO:0010193: response to ozone	1.07E-02
102	GO:0000302: response to reactive oxygen species	1.07E-02
103	GO:0007264: small GTPase mediated signal transduction	1.12E-02
104	GO:0010583: response to cyclopentenone	1.12E-02
105	GO:0030163: protein catabolic process	1.18E-02
106	GO:0051607: defense response to virus	1.34E-02
107	GO:0006970: response to osmotic stress	1.40E-02
108	GO:0042128: nitrate assimilation	1.51E-02
109	GO:0006950: response to stress	1.56E-02
110	GO:0006468: protein phosphorylation	1.61E-02
111	GO:0008219: cell death	1.68E-02
112	GO:0048481: plant ovule development	1.68E-02
113	GO:0006499: N-terminal protein myristoylation	1.80E-02
114	GO:0009407: toxin catabolic process	1.80E-02
115	GO:0010043: response to zinc ion	1.86E-02
116	GO:0007568: aging	1.86E-02
117	GO:0010119: regulation of stomatal movement	1.86E-02
118	GO:0006865: amino acid transport	1.92E-02
119	GO:0045454: cell redox homeostasis	1.94E-02
120	GO:0045892: negative regulation of transcription, DNA-templated	1.97E-02
121	GO:0009853: photorespiration	1.99E-02
122	GO:0006886: intracellular protein transport	2.00E-02
123	GO:0034599: cellular response to oxidative stress	2.05E-02
124	GO:0010114: response to red light	2.38E-02
125	GO:0009636: response to toxic substance	2.59E-02
126	GO:0042538: hyperosmotic salinity response	2.80E-02
127	GO:0009736: cytokinin-activated signaling pathway	2.94E-02
128	GO:0010224: response to UV-B	3.02E-02
129	GO:0015031: protein transport	3.03E-02
130	GO:0009873: ethylene-activated signaling pathway	3.08E-02
131	GO:0006096: glycolytic process	3.32E-02
132	GO:0048367: shoot system development	3.39E-02
133	GO:0009620: response to fungus	3.55E-02
134	GO:0018105: peptidyl-serine phosphorylation	3.86E-02
135	GO:0009742: brassinosteroid mediated signaling pathway	3.94E-02
136	GO:0006351: transcription, DNA-templated	4.13E-02
137	GO:0009611: response to wounding	4.32E-02
138	GO:0035556: intracellular signal transduction	4.46E-02
139	GO:0009845: seed germination	4.69E-02
140	GO:0045893: positive regulation of transcription, DNA-templated	4.84E-02
141	GO:0009790: embryo development	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0016504: peptidase activator activity	0.00E+00
2	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
3	GO:0003837: beta-ureidopropionase activity	0.00E+00
4	GO:0070577: lysine-acetylated histone binding	0.00E+00
5	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	5.19E-06
6	GO:0005524: ATP binding	1.19E-05
7	GO:0102391: decanoate--CoA ligase activity	3.64E-05
8	GO:0004012: phospholipid-translocating ATPase activity	3.64E-05
9	GO:0004467: long-chain fatty acid-CoA ligase activity	4.92E-05
10	GO:0004197: cysteine-type endopeptidase activity	5.63E-05
11	GO:0052747: sinapyl alcohol dehydrogenase activity	6.41E-05
12	GO:0005515: protein binding	7.55E-05
13	GO:0004348: glucosylceramidase activity	1.08E-04
14	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.96E-04
15	GO:0045140: inositol phosphoceramide synthase activity	2.52E-04
16	GO:0004061: arylformamidase activity	2.52E-04
17	GO:0052692: raffinose alpha-galactosidase activity	4.19E-04
18	GO:0005093: Rab GDP-dissociation inhibitor activity	4.19E-04
19	GO:0005047: signal recognition particle binding	4.19E-04
20	GO:0004557: alpha-galactosidase activity	4.19E-04
21	GO:0003840: gamma-glutamyltransferase activity	4.19E-04
22	GO:0036374: glutathione hydrolase activity	4.19E-04
23	GO:0033612: receptor serine/threonine kinase binding	4.33E-04
24	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	6.01E-04
25	GO:0070628: proteasome binding	7.98E-04
26	GO:0005496: steroid binding	1.01E-03
27	GO:0004356: glutamate-ammonia ligase activity	1.01E-03
28	GO:0003872: 6-phosphofructokinase activity	1.73E-03
29	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.00E-03
30	GO:0000287: magnesium ion binding	2.02E-03
31	GO:0008142: oxysterol binding	2.28E-03
32	GO:0003843: 1,3-beta-D-glucan synthase activity	2.28E-03
33	GO:0005267: potassium channel activity	2.28E-03
34	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	2.28E-03
35	GO:0043565: sequence-specific DNA binding	2.30E-03
36	GO:0004364: glutathione transferase activity	2.46E-03
37	GO:0008234: cysteine-type peptidase activity	3.79E-03
38	GO:0004175: endopeptidase activity	4.59E-03
39	GO:0004190: aspartic-type endopeptidase activity	4.96E-03
40	GO:0003954: NADH dehydrogenase activity	5.75E-03
41	GO:0004407: histone deacetylase activity	5.75E-03
42	GO:0043424: protein histidine kinase binding	6.15E-03
43	GO:0004707: MAP kinase activity	6.56E-03
44	GO:0004298: threonine-type endopeptidase activity	6.56E-03
45	GO:0004674: protein serine/threonine kinase activity	6.74E-03
46	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	7.82E-03
47	GO:0003727: single-stranded RNA binding	7.87E-03
48	GO:0003756: protein disulfide isomerase activity	7.87E-03
49	GO:0047134: protein-disulfide reductase activity	8.32E-03
50	GO:0030276: clathrin binding	9.26E-03
51	GO:0001085: RNA polymerase II transcription factor binding	9.26E-03
52	GO:0004791: thioredoxin-disulfide reductase activity	9.74E-03
53	GO:0016853: isomerase activity	9.74E-03
54	GO:0004672: protein kinase activity	9.82E-03
55	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.18E-02
56	GO:0016301: kinase activity	1.18E-02
57	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.51E-02
58	GO:0005516: calmodulin binding	1.54E-02
59	GO:0004683: calmodulin-dependent protein kinase activity	1.56E-02
60	GO:0005096: GTPase activator activity	1.74E-02
61	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.86E-02
62	GO:0042803: protein homodimerization activity	2.03E-02
63	GO:0005509: calcium ion binding	2.03E-02
64	GO:0003924: GTPase activity	2.39E-02
65	GO:0015293: symporter activity	2.59E-02
66	GO:0015171: amino acid transmembrane transporter activity	3.17E-02
67	GO:0016887: ATPase activity	3.70E-02
68	GO:0015035: protein disulfide oxidoreductase activity	3.86E-02
69	GO:0003700: transcription factor activity, sequence-specific DNA binding	3.88E-02
70	GO:0020037: heme binding	3.96E-02
71	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.52E-02
72	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0005886: plasma membrane	3.24E-06
3	GO:0045334: clathrin-coated endocytic vesicle	1.08E-04
4	GO:0005829: cytosol	1.60E-04
5	GO:0031304: intrinsic component of mitochondrial inner membrane	2.52E-04
6	GO:0005764: lysosome	2.55E-04
7	GO:0005839: proteasome core complex	4.33E-04
8	GO:0005783: endoplasmic reticulum	4.78E-04
9	GO:0000323: lytic vacuole	6.01E-04
10	GO:0005773: vacuole	7.79E-04
11	GO:0009504: cell plate	8.05E-04
12	GO:0005945: 6-phosphofructokinase complex	1.01E-03
13	GO:0030904: retromer complex	1.23E-03
14	GO:0000148: 1,3-beta-D-glucan synthase complex	2.28E-03
15	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	2.28E-03
16	GO:0031902: late endosome membrane	2.36E-03
17	GO:0005789: endoplasmic reticulum membrane	2.69E-03
18	GO:0016604: nuclear body	2.88E-03
19	GO:0017119: Golgi transport complex	3.20E-03
20	GO:0045271: respiratory chain complex I	6.15E-03
21	GO:0005623: cell	6.24E-03
22	GO:0016021: integral component of membrane	6.55E-03
23	GO:0005741: mitochondrial outer membrane	6.56E-03
24	GO:0005615: extracellular space	9.39E-03
25	GO:0019898: extrinsic component of membrane	1.02E-02
26	GO:0005777: peroxisome	1.10E-02
27	GO:0005774: vacuolar membrane	1.12E-02
28	GO:0005778: peroxisomal membrane	1.28E-02
29	GO:0005788: endoplasmic reticulum lumen	1.45E-02
30	GO:0005667: transcription factor complex	1.51E-02
31	GO:0005802: trans-Golgi network	1.67E-02
32	GO:0031966: mitochondrial membrane	2.80E-02
33	GO:0000502: proteasome complex	2.94E-02
34	GO:0000139: Golgi membrane	3.28E-02
35	GO:0005794: Golgi apparatus	3.29E-02
36	GO:0010008: endosome membrane	3.39E-02
37	GO:0005747: mitochondrial respiratory chain complex I	3.39E-02
38	GO:0005618: cell wall	4.27E-02
39	GO:0009524: phragmoplast	4.61E-02