co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G20060

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000478: endonucleolytic cleavage involved in rRNA processing	0.00E+00
2	GO:0017126: nucleologenesis	0.00E+00
3	GO:0080056: petal vascular tissue pattern formation	0.00E+00
4	GO:0039694: viral RNA genome replication	0.00E+00
5	GO:0080057: sepal vascular tissue pattern formation	0.00E+00
6	GO:0046686: response to cadmium ion	1.02E-06
7	GO:0061077: chaperone-mediated protein folding	3.69E-06
8	GO:0006457: protein folding	1.02E-05
9	GO:0006458: 'de novo' protein folding	1.27E-05
10	GO:0050821: protein stabilization	2.31E-05
11	GO:0030968: endoplasmic reticulum unfolded protein response	2.97E-05
12	GO:0006390: transcription from mitochondrial promoter	5.64E-05
13	GO:0000494: box C/D snoRNA 3'-end processing	5.64E-05
14	GO:0043687: post-translational protein modification	5.64E-05
15	GO:1990258: histone glutamine methylation	5.64E-05
16	GO:0009651: response to salt stress	1.11E-04
17	GO:0045041: protein import into mitochondrial intermembrane space	1.37E-04
18	GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	1.37E-04
19	GO:0051302: regulation of cell division	1.63E-04
20	GO:0045039: protein import into mitochondrial inner membrane	2.34E-04
21	GO:0055074: calcium ion homeostasis	2.34E-04
22	GO:0008033: tRNA processing	2.80E-04
23	GO:0072334: UDP-galactose transmembrane transport	3.41E-04
24	GO:0007276: gamete generation	3.41E-04
25	GO:0051131: chaperone-mediated protein complex assembly	3.41E-04
26	GO:0051205: protein insertion into membrane	4.56E-04
27	GO:0018279: protein N-linked glycosylation via asparagine	5.78E-04
28	GO:0006461: protein complex assembly	5.78E-04
29	GO:0045116: protein neddylation	5.78E-04
30	GO:0031167: rRNA methylation	5.78E-04
31	GO:0047484: regulation of response to osmotic stress	7.07E-04
32	GO:0042026: protein refolding	8.44E-04
33	GO:0009423: chorismate biosynthetic process	8.44E-04
34	GO:0009396: folic acid-containing compound biosynthetic process	9.85E-04
35	GO:0006605: protein targeting	1.13E-03
36	GO:0006102: isocitrate metabolic process	1.13E-03
37	GO:0001510: RNA methylation	1.29E-03
38	GO:0006189: 'de novo' IMP biosynthetic process	1.45E-03
39	GO:0015780: nucleotide-sugar transport	1.45E-03
40	GO:0098656: anion transmembrane transport	1.45E-03
41	GO:0006364: rRNA processing	1.47E-03
42	GO:0090332: stomatal closure	1.62E-03
43	GO:0035999: tetrahydrofolate interconversion	1.62E-03
44	GO:0009073: aromatic amino acid family biosynthetic process	1.97E-03
45	GO:0009553: embryo sac development	2.01E-03
46	GO:0006820: anion transport	2.16E-03
47	GO:0010588: cotyledon vascular tissue pattern formation	2.36E-03
48	GO:0034976: response to endoplasmic reticulum stress	2.97E-03
49	GO:0009555: pollen development	3.05E-03
50	GO:0010187: negative regulation of seed germination	3.18E-03
51	GO:0007131: reciprocal meiotic recombination	3.86E-03
52	GO:0030433: ubiquitin-dependent ERAD pathway	3.86E-03
53	GO:0010501: RNA secondary structure unwinding	4.83E-03
54	GO:0010197: polar nucleus fusion	5.09E-03
55	GO:0010305: leaf vascular tissue pattern formation	5.09E-03
56	GO:0042254: ribosome biogenesis	5.57E-03
57	GO:0006635: fatty acid beta-oxidation	5.88E-03
58	GO:0080156: mitochondrial mRNA modification	5.88E-03
59	GO:0048366: leaf development	6.43E-03
60	GO:0010252: auxin homeostasis	6.71E-03
61	GO:0010286: heat acclimation	7.00E-03
62	GO:0009414: response to water deprivation	7.23E-03
63	GO:0009816: defense response to bacterium, incompatible interaction	7.89E-03
64	GO:0048481: plant ovule development	9.13E-03
65	GO:0006499: N-terminal protein myristoylation	9.78E-03
66	GO:0009408: response to heat	1.00E-02
67	GO:0009853: photorespiration	1.08E-02
68	GO:0006099: tricarboxylic acid cycle	1.11E-02
69	GO:0042546: cell wall biogenesis	1.33E-02
70	GO:0000154: rRNA modification	1.40E-02
71	GO:0009965: leaf morphogenesis	1.40E-02
72	GO:0009735: response to cytokinin	1.63E-02
73	GO:0048367: shoot system development	1.83E-02
74	GO:0009793: embryo development ending in seed dormancy	2.16E-02
75	GO:0009790: embryo development	2.68E-02
76	GO:0006413: translational initiation	2.87E-02
77	GO:0009451: RNA modification	3.07E-02
78	GO:0009617: response to bacterium	3.42E-02
79	GO:0006979: response to oxidative stress	3.63E-02
80	GO:0009860: pollen tube growth	4.34E-02
81	GO:0009409: response to cold	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0004107: chorismate synthase activity	0.00E+00
2	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	0.00E+00
3	GO:0051082: unfolded protein binding	5.93E-09
4	GO:0000166: nucleotide binding	2.63E-07
5	GO:0005460: UDP-glucose transmembrane transporter activity	1.75E-06
6	GO:0005459: UDP-galactose transmembrane transporter activity	5.68E-06
7	GO:0030515: snoRNA binding	1.74E-05
8	GO:0003746: translation elongation factor activity	5.20E-05
9	GO:1990259: histone-glutamine methyltransferase activity	5.64E-05
10	GO:0004638: phosphoribosylaminoimidazole carboxylase activity	5.64E-05
11	GO:0044183: protein binding involved in protein folding	6.52E-05
12	GO:0019781: NEDD8 activating enzyme activity	1.37E-04
13	GO:0043021: ribonucleoprotein complex binding	1.37E-04
14	GO:0005525: GTP binding	1.78E-04
15	GO:0008649: rRNA methyltransferase activity	2.34E-04
16	GO:0070180: large ribosomal subunit rRNA binding	2.34E-04
17	GO:0010181: FMN binding	3.25E-04
18	GO:0004449: isocitrate dehydrogenase (NAD+) activity	3.41E-04
19	GO:0004576: oligosaccharyl transferase activity	4.56E-04
20	GO:0016004: phospholipase activator activity	4.56E-04
21	GO:0008641: small protein activating enzyme activity	5.78E-04
22	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	5.78E-04
23	GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity	7.07E-04
24	GO:0015288: porin activity	1.13E-03
25	GO:0008135: translation factor activity, RNA binding	1.29E-03
26	GO:0008308: voltage-gated anion channel activity	1.29E-03
27	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.47E-03
28	GO:0003723: RNA binding	2.93E-03
29	GO:0003756: protein disulfide isomerase activity	4.34E-03
30	GO:0008233: peptidase activity	6.66E-03
31	GO:0008237: metallopeptidase activity	7.00E-03
32	GO:0004004: ATP-dependent RNA helicase activity	8.50E-03
33	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	9.13E-03
34	GO:0003924: GTPase activity	1.00E-02
35	GO:0050897: cobalt ion binding	1.01E-02
36	GO:0003697: single-stranded DNA binding	1.08E-02
37	GO:0005524: ATP binding	1.14E-02
38	GO:0051539: 4 iron, 4 sulfur cluster binding	1.18E-02
39	GO:0003729: mRNA binding	1.24E-02
40	GO:0051287: NAD binding	1.48E-02
41	GO:0003735: structural constituent of ribosome	1.79E-02
42	GO:0008026: ATP-dependent helicase activity	2.13E-02
43	GO:0004386: helicase activity	2.18E-02
44	GO:0030246: carbohydrate binding	2.40E-02
45	GO:0016829: lyase activity	2.54E-02
46	GO:0005509: calcium ion binding	3.33E-02
47	GO:0003743: translation initiation factor activity	3.37E-02
48	GO:0000287: magnesium ion binding	4.06E-02

Rank	GO Term	Adjusted P value
1	GO:0019034: viral replication complex	0.00E+00
2	GO:0005832: chaperonin-containing T-complex	0.00E+00
3	GO:0005788: endoplasmic reticulum lumen	5.08E-07
4	GO:0005739: mitochondrion	8.65E-07
5	GO:0031428: box C/D snoRNP complex	8.76E-06
6	GO:0005730: nucleolus	1.57E-05
7	GO:0034245: mitochondrial DNA-directed RNA polymerase complex	5.64E-05
8	GO:0032040: small-subunit processome	7.64E-05
9	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	8.23E-05
10	GO:0030176: integral component of endoplasmic reticulum membrane	1.16E-04
11	GO:0005774: vacuolar membrane	1.21E-04
12	GO:0070545: PeBoW complex	1.37E-04
13	GO:0008250: oligosaccharyltransferase complex	5.78E-04
14	GO:0005783: endoplasmic reticulum	6.50E-04
15	GO:0032588: trans-Golgi network membrane	7.07E-04
16	GO:0005618: cell wall	7.71E-04
17	GO:0030173: integral component of Golgi membrane	8.44E-04
18	GO:0005762: mitochondrial large ribosomal subunit	8.44E-04
19	GO:0030687: preribosome, large subunit precursor	9.85E-04
20	GO:0046930: pore complex	1.29E-03
21	GO:0005773: vacuole	1.36E-03
22	GO:0031901: early endosome membrane	1.45E-03
23	GO:0015030: Cajal body	1.62E-03
24	GO:0005834: heterotrimeric G-protein complex	1.84E-03
25	GO:0005852: eukaryotic translation initiation factor 3 complex	1.97E-03
26	GO:0009536: plastid	1.98E-03
27	GO:0043234: protein complex	2.97E-03
28	GO:0005741: mitochondrial outer membrane	3.63E-03
29	GO:0005829: cytosol	4.45E-03
30	GO:0016592: mediator complex	6.15E-03
31	GO:0009507: chloroplast	8.80E-03
32	GO:0005747: mitochondrial respiratory chain complex I	1.83E-02
33	GO:0005623: cell	2.45E-02
34	GO:0009506: plasmodesma	2.46E-02
35	GO:0005759: mitochondrial matrix	2.82E-02
36	GO:0005840: ribosome	3.78E-02
37	GO:0022625: cytosolic large ribosomal subunit	4.97E-02