co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G18890

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
2	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
3	GO:0070272: proton-transporting ATP synthase complex biogenesis	0.00E+00
4	GO:0097164: ammonium ion metabolic process	0.00E+00
5	GO:0000455: enzyme-directed rRNA pseudouridine synthesis	0.00E+00
6	GO:0042425: choline biosynthetic process	0.00E+00
7	GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
8	GO:0042493: response to drug	0.00E+00
9	GO:1905499: trichome papilla formation	0.00E+00
10	GO:0006437: tyrosyl-tRNA aminoacylation	0.00E+00
11	GO:0071555: cell wall organization	1.21E-05
12	GO:0042335: cuticle development	4.58E-05
13	GO:0009826: unidimensional cell growth	4.91E-05
14	GO:0009828: plant-type cell wall loosening	9.54E-05
15	GO:0032544: plastid translation	1.04E-04
16	GO:0019510: S-adenosylhomocysteine catabolic process	1.27E-04
17	GO:0005980: glycogen catabolic process	1.27E-04
18	GO:0042759: long-chain fatty acid biosynthetic process	1.27E-04
19	GO:0043007: maintenance of rDNA	1.27E-04
20	GO:0006949: syncytium formation	1.83E-04
21	GO:0006633: fatty acid biosynthetic process	1.89E-04
22	GO:0043039: tRNA aminoacylation	2.94E-04
23	GO:0033353: S-adenosylmethionine cycle	2.94E-04
24	GO:0070981: L-asparagine biosynthetic process	2.94E-04
25	GO:0071258: cellular response to gravity	2.94E-04
26	GO:0006529: asparagine biosynthetic process	2.94E-04
27	GO:0010025: wax biosynthetic process	4.02E-04
28	GO:0009664: plant-type cell wall organization	4.73E-04
29	GO:0046168: glycerol-3-phosphate catabolic process	4.86E-04
30	GO:0006065: UDP-glucuronate biosynthetic process	4.86E-04
31	GO:0007017: microtubule-based process	4.91E-04
32	GO:0016998: cell wall macromolecule catabolic process	5.39E-04
33	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	6.40E-04
34	GO:0006072: glycerol-3-phosphate metabolic process	6.95E-04
35	GO:0051016: barbed-end actin filament capping	6.95E-04
36	GO:0009650: UV protection	6.95E-04
37	GO:0046739: transport of virus in multicellular host	6.95E-04
38	GO:0006168: adenine salvage	6.95E-04
39	GO:0050482: arachidonic acid secretion	6.95E-04
40	GO:0009413: response to flooding	6.95E-04
41	GO:0006166: purine ribonucleoside salvage	6.95E-04
42	GO:0015689: molybdate ion transport	9.21E-04
43	GO:0015976: carbon utilization	9.21E-04
44	GO:0006869: lipid transport	9.36E-04
45	GO:0006665: sphingolipid metabolic process	1.16E-03
46	GO:0048359: mucilage metabolic process involved in seed coat development	1.16E-03
47	GO:0006656: phosphatidylcholine biosynthetic process	1.16E-03
48	GO:0044209: AMP salvage	1.16E-03
49	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.43E-03
50	GO:0035435: phosphate ion transmembrane transport	1.43E-03
51	GO:0006014: D-ribose metabolic process	1.43E-03
52	GO:0048280: vesicle fusion with Golgi apparatus	1.71E-03
53	GO:0009554: megasporogenesis	1.71E-03
54	GO:0010019: chloroplast-nucleus signaling pathway	1.71E-03
55	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.71E-03
56	GO:0010411: xyloglucan metabolic process	1.78E-03
57	GO:0048528: post-embryonic root development	2.01E-03
58	GO:0006955: immune response	2.01E-03
59	GO:0006353: DNA-templated transcription, termination	2.32E-03
60	GO:0006875: cellular metal ion homeostasis	2.32E-03
61	GO:0045010: actin nucleation	2.32E-03
62	GO:0006644: phospholipid metabolic process	2.32E-03
63	GO:0016051: carbohydrate biosynthetic process	2.48E-03
64	GO:0010497: plasmodesmata-mediated intercellular transport	2.65E-03
65	GO:0015780: nucleotide-sugar transport	3.00E-03
66	GO:0042546: cell wall biogenesis	3.32E-03
67	GO:0042761: very long-chain fatty acid biosynthetic process	3.36E-03
68	GO:0016573: histone acetylation	3.36E-03
69	GO:0008643: carbohydrate transport	3.45E-03
70	GO:0006896: Golgi to vacuole transport	3.73E-03
71	GO:0042538: hyperosmotic salinity response	3.99E-03
72	GO:0000038: very long-chain fatty acid metabolic process	4.12E-03
73	GO:0006415: translational termination	4.12E-03
74	GO:0016024: CDP-diacylglycerol biosynthetic process	4.52E-03
75	GO:0045037: protein import into chloroplast stroma	4.52E-03
76	GO:0030036: actin cytoskeleton organization	4.93E-03
77	GO:0010143: cutin biosynthetic process	5.36E-03
78	GO:0006541: glutamine metabolic process	5.36E-03
79	GO:0009266: response to temperature stimulus	5.36E-03
80	GO:0016042: lipid catabolic process	5.70E-03
81	GO:0009969: xyloglucan biosynthetic process	5.80E-03
82	GO:0006338: chromatin remodeling	6.71E-03
83	GO:0019953: sexual reproduction	7.19E-03
84	GO:0006418: tRNA aminoacylation for protein translation	7.19E-03
85	GO:0030245: cellulose catabolic process	8.18E-03
86	GO:0006730: one-carbon metabolic process	8.18E-03
87	GO:0031348: negative regulation of defense response	8.18E-03
88	GO:0009411: response to UV	8.69E-03
89	GO:0019722: calcium-mediated signaling	9.21E-03
90	GO:0010091: trichome branching	9.21E-03
91	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	9.75E-03
92	GO:0042147: retrograde transport, endosome to Golgi	9.75E-03
93	GO:0000271: polysaccharide biosynthetic process	1.03E-02
94	GO:0080022: primary root development	1.03E-02
95	GO:0045490: pectin catabolic process	1.05E-02
96	GO:0045489: pectin biosynthetic process	1.09E-02
97	GO:0009646: response to absence of light	1.14E-02
98	GO:0006623: protein targeting to vacuole	1.20E-02
99	GO:0010183: pollen tube guidance	1.20E-02
100	GO:0019252: starch biosynthetic process	1.20E-02
101	GO:0006891: intra-Golgi vesicle-mediated transport	1.26E-02
102	GO:0010583: response to cyclopentenone	1.32E-02
103	GO:0005975: carbohydrate metabolic process	1.45E-02
104	GO:0007267: cell-cell signaling	1.50E-02
105	GO:0000910: cytokinesis	1.57E-02
106	GO:0010027: thylakoid membrane organization	1.63E-02
107	GO:0009658: chloroplast organization	1.63E-02
108	GO:0009860: pollen tube growth	1.76E-02
109	GO:0006888: ER to Golgi vesicle-mediated transport	1.83E-02
110	GO:0016311: dephosphorylation	1.90E-02
111	GO:0009817: defense response to fungus, incompatible interaction	1.97E-02
112	GO:0009813: flavonoid biosynthetic process	2.04E-02
113	GO:0045087: innate immune response	2.33E-02
114	GO:0006631: fatty acid metabolic process	2.64E-02
115	GO:0051707: response to other organism	2.80E-02
116	GO:0010114: response to red light	2.80E-02
117	GO:0032259: methylation	2.87E-02
118	GO:0006281: DNA repair	2.99E-02
119	GO:0048367: shoot system development	3.98E-02
120	GO:0042545: cell wall modification	4.35E-02
121	GO:0051726: regulation of cell cycle	4.63E-02

Rank	GO Term	Adjusted P value
1	GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity	0.00E+00
2	GO:0000979: RNA polymerase II core promoter sequence-specific DNA binding	0.00E+00
3	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
4	GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity	0.00E+00
5	GO:0005200: structural constituent of cytoskeleton	1.04E-04
6	GO:0052689: carboxylic ester hydrolase activity	1.06E-04
7	GO:0030794: (S)-coclaurine-N-methyltransferase activity	1.27E-04
8	GO:0004560: alpha-L-fucosidase activity	1.27E-04
9	GO:0004013: adenosylhomocysteinase activity	1.27E-04
10	GO:0008184: glycogen phosphorylase activity	1.27E-04
11	GO:0042834: peptidoglycan binding	1.27E-04
12	GO:0004831: tyrosine-tRNA ligase activity	1.27E-04
13	GO:0004071: aspartate-ammonia ligase activity	1.27E-04
14	GO:0004645: phosphorylase activity	1.27E-04
15	GO:0009374: biotin binding	1.27E-04
16	GO:0015088: copper uptake transmembrane transporter activity	1.27E-04
17	GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity	2.94E-04
18	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	2.94E-04
19	GO:0000234: phosphoethanolamine N-methyltransferase activity	2.94E-04
20	GO:0051287: NAD binding	4.51E-04
21	GO:0005504: fatty acid binding	4.86E-04
22	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	4.86E-04
23	GO:0003979: UDP-glucose 6-dehydrogenase activity	4.86E-04
24	GO:0008514: organic anion transmembrane transporter activity	6.94E-04
25	GO:0003999: adenine phosphoribosyltransferase activity	6.95E-04
26	GO:0016149: translation release factor activity, codon specific	6.95E-04
27	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	6.95E-04
28	GO:0052793: pectin acetylesterase activity	9.21E-04
29	GO:0015098: molybdate ion transmembrane transporter activity	9.21E-04
30	GO:0045430: chalcone isomerase activity	9.21E-04
31	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.06E-03
32	GO:0009922: fatty acid elongase activity	1.16E-03
33	GO:0004623: phospholipase A2 activity	1.16E-03
34	GO:0003989: acetyl-CoA carboxylase activity	1.16E-03
35	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	1.43E-03
36	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	1.43E-03
37	GO:0004747: ribokinase activity	1.71E-03
38	GO:0051753: mannan synthase activity	1.71E-03
39	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.78E-03
40	GO:0008289: lipid binding	1.83E-03
41	GO:0008865: fructokinase activity	2.32E-03
42	GO:0016788: hydrolase activity, acting on ester bonds	2.81E-03
43	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	3.00E-03
44	GO:0003747: translation release factor activity	3.00E-03
45	GO:0005381: iron ion transmembrane transporter activity	3.36E-03
46	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.05E-03
47	GO:0008378: galactosyltransferase activity	4.52E-03
48	GO:0009982: pseudouridine synthase activity	4.93E-03
49	GO:0015114: phosphate ion transmembrane transporter activity	4.93E-03
50	GO:0004089: carbonate dehydratase activity	4.93E-03
51	GO:0030599: pectinesterase activity	5.73E-03
52	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	6.25E-03
53	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	6.25E-03
54	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	6.25E-03
55	GO:0004857: enzyme inhibitor activity	6.71E-03
56	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	8.18E-03
57	GO:0030570: pectate lyase activity	8.69E-03
58	GO:0008810: cellulase activity	8.69E-03
59	GO:0004812: aminoacyl-tRNA ligase activity	9.75E-03
60	GO:0003713: transcription coactivator activity	1.09E-02
61	GO:0019901: protein kinase binding	1.20E-02
62	GO:0051015: actin filament binding	1.38E-02
63	GO:0016791: phosphatase activity	1.44E-02
64	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.50E-02
65	GO:0008168: methyltransferase activity	1.57E-02
66	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.11E-02
67	GO:0003746: translation elongation factor activity	2.33E-02
68	GO:0000149: SNARE binding	2.48E-02
69	GO:0042803: protein homodimerization activity	2.55E-02
70	GO:0005484: SNAP receptor activity	2.80E-02
71	GO:0005198: structural molecule activity	3.04E-02
72	GO:0045330: aspartyl esterase activity	3.72E-02
73	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.98E-02
74	GO:0004650: polygalacturonase activity	4.16E-02
75	GO:0003779: actin binding	4.35E-02
76	GO:0016746: transferase activity, transferring acyl groups	4.53E-02

Rank	GO Term	Adjusted P value
1	GO:0046658: anchored component of plasma membrane	1.63E-10
2	GO:0031225: anchored component of membrane	2.13E-09
3	GO:0005618: cell wall	1.40E-08
4	GO:0005576: extracellular region	3.95E-06
5	GO:0005886: plasma membrane	3.24E-05
6	GO:0009923: fatty acid elongase complex	1.27E-04
7	GO:0045298: tubulin complex	1.28E-04
8	GO:0048046: apoplast	1.43E-04
9	GO:0009505: plant-type cell wall	1.59E-04
10	GO:0009317: acetyl-CoA carboxylase complex	4.86E-04
11	GO:0005853: eukaryotic translation elongation factor 1 complex	4.86E-04
12	GO:0009331: glycerol-3-phosphate dehydrogenase complex	6.95E-04
13	GO:0031897: Tic complex	9.21E-04
14	GO:0000123: histone acetyltransferase complex	2.01E-03
15	GO:0009570: chloroplast stroma	2.24E-03
16	GO:0012507: ER to Golgi transport vesicle membrane	2.32E-03
17	GO:0009501: amyloplast	2.32E-03
18	GO:0009536: plastid	2.73E-03
19	GO:0009706: chloroplast inner membrane	6.09E-03
20	GO:0009507: chloroplast	7.22E-03
21	GO:0031410: cytoplasmic vesicle	8.18E-03
22	GO:0009506: plasmodesma	1.16E-02
23	GO:0009504: cell plate	1.20E-02
24	GO:0016020: membrane	1.64E-02
25	GO:0009707: chloroplast outer membrane	1.97E-02
26	GO:0005794: Golgi apparatus	2.30E-02
27	GO:0031201: SNARE complex	2.64E-02
28	GO:0031902: late endosome membrane	2.64E-02