Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G18660

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0051553: flavone biosynthetic process0.00E+00
2GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
3GO:0072722: response to amitrole0.00E+00
4GO:0006592: ornithine biosynthetic process0.00E+00
5GO:0071327: cellular response to trehalose stimulus0.00E+00
6GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
7GO:0042891: antibiotic transport0.00E+00
8GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase0.00E+00
9GO:0080053: response to phenylalanine0.00E+00
10GO:0002376: immune system process0.00E+00
11GO:0070212: protein poly-ADP-ribosylation0.00E+00
12GO:0043201: response to leucine0.00E+00
13GO:0045792: negative regulation of cell size0.00E+00
14GO:1900367: positive regulation of defense response to insect0.00E+00
15GO:0006983: ER overload response0.00E+00
16GO:0080052: response to histidine0.00E+00
17GO:0042742: defense response to bacterium5.16E-14
18GO:0009617: response to bacterium8.99E-13
19GO:0034976: response to endoplasmic reticulum stress2.44E-09
20GO:0006457: protein folding3.34E-09
21GO:0009751: response to salicylic acid3.48E-08
22GO:0010150: leaf senescence4.85E-08
23GO:0006952: defense response1.19E-07
24GO:0000162: tryptophan biosynthetic process1.46E-07
25GO:0009627: systemic acquired resistance3.84E-07
26GO:0009697: salicylic acid biosynthetic process1.75E-06
27GO:0080151: positive regulation of salicylic acid mediated signaling pathway6.33E-06
28GO:0031349: positive regulation of defense response6.33E-06
29GO:0009816: defense response to bacterium, incompatible interaction7.76E-06
30GO:0010200: response to chitin9.49E-06
31GO:0009626: plant-type hypersensitive response1.39E-05
32GO:0009625: response to insect1.81E-05
33GO:0051707: response to other organism4.31E-05
34GO:0002239: response to oomycetes4.86E-05
35GO:0052544: defense response by callose deposition in cell wall5.94E-05
36GO:0080142: regulation of salicylic acid biosynthetic process8.61E-05
37GO:0006979: response to oxidative stress8.84E-05
38GO:0002237: response to molecule of bacterial origin1.09E-04
39GO:0046283: anthocyanin-containing compound metabolic process1.34E-04
40GO:0009759: indole glucosinolate biosynthetic process1.92E-04
41GO:0010942: positive regulation of cell death1.92E-04
42GO:0006468: protein phosphorylation2.09E-04
43GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response2.60E-04
44GO:0031348: negative regulation of defense response2.64E-04
45GO:0071456: cellular response to hypoxia2.64E-04
46GO:0060862: negative regulation of floral organ abscission3.75E-04
47GO:0046244: salicylic acid catabolic process3.75E-04
48GO:0010266: response to vitamin B13.75E-04
49GO:0009609: response to symbiotic bacterium3.75E-04
50GO:1901183: positive regulation of camalexin biosynthetic process3.75E-04
51GO:0009700: indole phytoalexin biosynthetic process3.75E-04
52GO:0050691: regulation of defense response to virus by host3.75E-04
53GO:0030091: protein repair4.22E-04
54GO:0030968: endoplasmic reticulum unfolded protein response5.17E-04
55GO:2000031: regulation of salicylic acid mediated signaling pathway5.17E-04
56GO:0010204: defense response signaling pathway, resistance gene-independent5.17E-04
57GO:0031347: regulation of defense response5.24E-04
58GO:0045454: cell redox homeostasis5.29E-04
59GO:0000302: response to reactive oxygen species5.95E-04
60GO:0046685: response to arsenic-containing substance6.19E-04
61GO:0010112: regulation of systemic acquired resistance6.19E-04
62GO:1900426: positive regulation of defense response to bacterium7.31E-04
63GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway7.31E-04
64GO:0030003: cellular cation homeostasis8.15E-04
65GO:0010618: aerenchyma formation8.15E-04
66GO:0043066: negative regulation of apoptotic process8.15E-04
67GO:0015865: purine nucleotide transport8.15E-04
68GO:0042939: tripeptide transport8.15E-04
69GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine8.15E-04
70GO:0043069: negative regulation of programmed cell death8.52E-04
71GO:0009682: induced systemic resistance9.79E-04
72GO:0046686: response to cadmium ion1.09E-03
73GO:0002230: positive regulation of defense response to virus by host1.32E-03
74GO:0055074: calcium ion homeostasis1.32E-03
75GO:0010272: response to silver ion1.32E-03
76GO:0048281: inflorescence morphogenesis1.32E-03
77GO:0010581: regulation of starch biosynthetic process1.32E-03
78GO:0009969: xyloglucan biosynthetic process1.60E-03
79GO:1902290: positive regulation of defense response to oomycetes1.91E-03
80GO:0015700: arsenite transport1.91E-03
81GO:0000187: activation of MAPK activity1.91E-03
82GO:0010116: positive regulation of abscisic acid biosynthetic process1.91E-03
83GO:0033014: tetrapyrrole biosynthetic process1.91E-03
84GO:0043207: response to external biotic stimulus1.91E-03
85GO:0046902: regulation of mitochondrial membrane permeability1.91E-03
86GO:0009399: nitrogen fixation1.91E-03
87GO:0015031: protein transport1.92E-03
88GO:0009863: salicylic acid mediated signaling pathway1.97E-03
89GO:0009409: response to cold2.24E-03
90GO:0016998: cell wall macromolecule catabolic process2.39E-03
91GO:0042938: dipeptide transport2.56E-03
92GO:0006542: glutamine biosynthetic process2.56E-03
93GO:0080037: negative regulation of cytokinin-activated signaling pathway2.56E-03
94GO:0070534: protein K63-linked ubiquitination2.56E-03
95GO:0048830: adventitious root development2.56E-03
96GO:0045088: regulation of innate immune response2.56E-03
97GO:0010188: response to microbial phytotoxin2.56E-03
98GO:0009814: defense response, incompatible interaction2.62E-03
99GO:0009651: response to salt stress3.10E-03
100GO:0009306: protein secretion3.11E-03
101GO:0009414: response to water deprivation3.18E-03
102GO:0005513: detection of calcium ion3.28E-03
103GO:0010225: response to UV-C3.28E-03
104GO:0000304: response to singlet oxygen3.28E-03
105GO:2000762: regulation of phenylpropanoid metabolic process3.28E-03
106GO:0006486: protein glycosylation3.60E-03
107GO:0000413: protein peptidyl-prolyl isomerization3.64E-03
108GO:0002238: response to molecule of fungal origin4.05E-03
109GO:0006301: postreplication repair4.05E-03
110GO:0060918: auxin transport4.05E-03
111GO:1900425: negative regulation of defense response to bacterium4.05E-03
112GO:0010193: response to ozone4.84E-03
113GO:0002229: defense response to oomycetes4.84E-03
114GO:0010310: regulation of hydrogen peroxide metabolic process4.88E-03
115GO:0042372: phylloquinone biosynthetic process4.88E-03
116GO:0009612: response to mechanical stimulus4.88E-03
117GO:0009620: response to fungus5.03E-03
118GO:0030163: protein catabolic process5.52E-03
119GO:0050832: defense response to fungus5.68E-03
120GO:1902074: response to salt5.77E-03
121GO:0009610: response to symbiotic fungus5.77E-03
122GO:0071446: cellular response to salicylic acid stimulus5.77E-03
123GO:1900057: positive regulation of leaf senescence5.77E-03
124GO:0006508: proteolysis6.18E-03
125GO:0009737: response to abscisic acid6.53E-03
126GO:0030162: regulation of proteolysis6.70E-03
127GO:1900150: regulation of defense response to fungus6.70E-03
128GO:0009787: regulation of abscisic acid-activated signaling pathway6.70E-03
129GO:0009819: drought recovery6.70E-03
130GO:0043068: positive regulation of programmed cell death6.70E-03
131GO:0006605: protein targeting6.70E-03
132GO:0016192: vesicle-mediated transport7.08E-03
133GO:0043562: cellular response to nitrogen levels7.69E-03
134GO:0009808: lignin metabolic process7.69E-03
135GO:0009699: phenylpropanoid biosynthetic process7.69E-03
136GO:0006075: (1->3)-beta-D-glucan biosynthetic process7.69E-03
137GO:0010120: camalexin biosynthetic process7.69E-03
138GO:0010497: plasmodesmata-mediated intercellular transport7.69E-03
139GO:0006526: arginine biosynthetic process7.69E-03
140GO:0015780: nucleotide-sugar transport8.73E-03
141GO:0051865: protein autoubiquitination8.73E-03
142GO:0006783: heme biosynthetic process8.73E-03
143GO:0006886: intracellular protein transport9.03E-03
144GO:0008219: cell death9.17E-03
145GO:0010205: photoinhibition9.82E-03
146GO:0043067: regulation of programmed cell death9.82E-03
147GO:2000280: regulation of root development9.82E-03
148GO:0009407: toxin catabolic process1.01E-02
149GO:0010043: response to zinc ion1.06E-02
150GO:0009641: shade avoidance1.10E-02
151GO:0010215: cellulose microfibril organization1.10E-02
152GO:0009870: defense response signaling pathway, resistance gene-dependent1.10E-02
153GO:0006032: chitin catabolic process1.10E-02
154GO:0006995: cellular response to nitrogen starvation1.10E-02
155GO:0000272: polysaccharide catabolic process1.21E-02
156GO:0009684: indoleacetic acid biosynthetic process1.21E-02
157GO:0000038: very long-chain fatty acid metabolic process1.21E-02
158GO:0006816: calcium ion transport1.21E-02
159GO:0009089: lysine biosynthetic process via diaminopimelate1.21E-02
160GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.31E-02
161GO:0009753: response to jasmonic acid1.32E-02
162GO:0016925: protein sumoylation1.34E-02
163GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.34E-02
164GO:0000266: mitochondrial fission1.34E-02
165GO:0012501: programmed cell death1.34E-02
166GO:0002213: defense response to insect1.34E-02
167GO:0010105: negative regulation of ethylene-activated signaling pathway1.34E-02
168GO:0007166: cell surface receptor signaling pathway1.35E-02
169GO:0042542: response to hydrogen peroxide1.45E-02
170GO:0010075: regulation of meristem growth1.46E-02
171GO:0009934: regulation of meristem structural organization1.59E-02
172GO:0006541: glutamine metabolic process1.59E-02
173GO:0007034: vacuolar transport1.59E-02
174GO:0007165: signal transduction1.61E-02
175GO:0009636: response to toxic substance1.69E-02
176GO:0070588: calcium ion transmembrane transport1.73E-02
177GO:0010053: root epidermal cell differentiation1.73E-02
178GO:0010039: response to iron ion1.73E-02
179GO:0009846: pollen germination1.89E-02
180GO:2000377: regulation of reactive oxygen species metabolic process2.01E-02
181GO:0006874: cellular calcium ion homeostasis2.15E-02
182GO:0009723: response to ethylene2.38E-02
183GO:0019748: secondary metabolic process2.46E-02
184GO:2000022: regulation of jasmonic acid mediated signaling pathway2.46E-02
185GO:0030433: ubiquitin-dependent ERAD pathway2.46E-02
186GO:0009411: response to UV2.62E-02
187GO:0001944: vasculature development2.62E-02
188GO:0006012: galactose metabolic process2.62E-02
189GO:0010584: pollen exine formation2.78E-02
190GO:0009553: embryo sac development2.81E-02
191GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.94E-02
192GO:0042147: retrograde transport, endosome to Golgi2.94E-02
193GO:0010051: xylem and phloem pattern formation3.11E-02
194GO:0010118: stomatal movement3.11E-02
195GO:0042631: cellular response to water deprivation3.11E-02
196GO:0010197: polar nucleus fusion3.28E-02
197GO:0048868: pollen tube development3.28E-02
198GO:0008360: regulation of cell shape3.28E-02
199GO:0006662: glycerol ether metabolic process3.28E-02
200GO:0009646: response to absence of light3.45E-02
201GO:0009851: auxin biosynthetic process3.63E-02
202GO:0006623: protein targeting to vacuole3.63E-02
203GO:0006891: intra-Golgi vesicle-mediated transport3.81E-02
204GO:0009630: gravitropism3.99E-02
205GO:0016032: viral process3.99E-02
206GO:0019761: glucosinolate biosynthetic process3.99E-02
207GO:0016042: lipid catabolic process4.06E-02
208GO:0009408: response to heat4.20E-02
209GO:0009790: embryo development4.22E-02
210GO:0006511: ubiquitin-dependent protein catabolic process4.35E-02
211GO:0009567: double fertilization forming a zygote and endosperm4.36E-02
212GO:0051607: defense response to virus4.75E-02
213GO:0040008: regulation of growth4.76E-02
214GO:0009615: response to virus4.94E-02
215GO:0001666: response to hypoxia4.94E-02
RankGO TermAdjusted P value
1GO:0008777: acetylornithine deacetylase activity0.00E+00
2GO:0016603: glutaminyl-peptide cyclotransferase activity0.00E+00
3GO:0033759: flavone synthase activity0.00E+00
4GO:0015370: solute:sodium symporter activity0.00E+00
5GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
6GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
7GO:0003980: UDP-glucose:glycoprotein glucosyltransferase activity0.00E+00
8GO:0003756: protein disulfide isomerase activity7.37E-07
9GO:0016301: kinase activity8.74E-06
10GO:0008320: protein transmembrane transporter activity9.21E-06
11GO:0047631: ADP-ribose diphosphatase activity1.34E-04
12GO:0051082: unfolded protein binding1.76E-04
13GO:0000210: NAD+ diphosphatase activity1.92E-04
14GO:0033743: peptide-methionine (R)-S-oxide reductase activity2.60E-04
15GO:0005509: calcium ion binding2.66E-04
16GO:2001147: camalexin binding3.75E-04
17GO:0010285: L,L-diaminopimelate aminotransferase activity3.75E-04
18GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity3.75E-04
19GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.75E-04
20GO:0031127: alpha-(1,2)-fucosyltransferase activity3.75E-04
21GO:2001227: quercitrin binding3.75E-04
22GO:0004425: indole-3-glycerol-phosphate synthase activity3.75E-04
23GO:0033984: indole-3-glycerol-phosphate lyase activity3.75E-04
24GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity3.75E-04
25GO:0080042: ADP-glucose pyrophosphohydrolase activity3.75E-04
26GO:0004048: anthranilate phosphoribosyltransferase activity3.75E-04
27GO:0008909: isochorismate synthase activity3.75E-04
28GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity3.75E-04
29GO:0004325: ferrochelatase activity3.75E-04
30GO:0004674: protein serine/threonine kinase activity6.33E-04
31GO:0004566: beta-glucuronidase activity8.15E-04
32GO:0080041: ADP-ribose pyrophosphohydrolase activity8.15E-04
33GO:0047364: desulfoglucosinolate sulfotransferase activity8.15E-04
34GO:0015105: arsenite transmembrane transporter activity8.15E-04
35GO:0017110: nucleoside-diphosphatase activity8.15E-04
36GO:0004338: glucan exo-1,3-beta-glucosidase activity8.15E-04
37GO:0042937: tripeptide transporter activity8.15E-04
38GO:0005262: calcium channel activity1.27E-03
39GO:0004049: anthranilate synthase activity1.32E-03
40GO:0000030: mannosyltransferase activity1.32E-03
41GO:0008430: selenium binding1.32E-03
42GO:0004190: aspartic-type endopeptidase activity1.60E-03
43GO:0008061: chitin binding1.60E-03
44GO:0035529: NADH pyrophosphatase activity1.91E-03
45GO:0005460: UDP-glucose transmembrane transporter activity1.91E-03
46GO:0004364: glutathione transferase activity2.34E-03
47GO:0004298: threonine-type endopeptidase activity2.39E-03
48GO:0015204: urea transmembrane transporter activity2.56E-03
49GO:0004834: tryptophan synthase activity2.56E-03
50GO:0042936: dipeptide transporter activity2.56E-03
51GO:0005524: ATP binding2.66E-03
52GO:0005471: ATP:ADP antiporter activity3.28E-03
53GO:0004356: glutamate-ammonia ligase activity3.28E-03
54GO:0005459: UDP-galactose transmembrane transporter activity3.28E-03
55GO:0030976: thiamine pyrophosphate binding4.05E-03
56GO:0004029: aldehyde dehydrogenase (NAD) activity4.05E-03
57GO:0031625: ubiquitin protein ligase binding4.11E-03
58GO:0016853: isomerase activity4.22E-03
59GO:0005261: cation channel activity4.88E-03
60GO:0008113: peptide-methionine (S)-S-oxide reductase activity4.88E-03
61GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity5.77E-03
62GO:0043295: glutathione binding5.77E-03
63GO:0008233: peptidase activity6.38E-03
64GO:0004708: MAP kinase kinase activity6.70E-03
65GO:0004714: transmembrane receptor protein tyrosine kinase activity6.70E-03
66GO:0004034: aldose 1-epimerase activity6.70E-03
67GO:0003843: 1,3-beta-D-glucan synthase activity7.69E-03
68GO:0030247: polysaccharide binding8.27E-03
69GO:0004683: calmodulin-dependent protein kinase activity8.27E-03
70GO:0004806: triglyceride lipase activity8.27E-03
71GO:0008417: fucosyltransferase activity8.73E-03
72GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen9.69E-03
73GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity9.82E-03
74GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.04E-02
75GO:0050897: cobalt ion binding1.06E-02
76GO:0004568: chitinase activity1.10E-02
77GO:0004713: protein tyrosine kinase activity1.10E-02
78GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.17E-02
79GO:0031072: heat shock protein binding1.46E-02
80GO:0005388: calcium-transporting ATPase activity1.46E-02
81GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.59E-02
82GO:0005217: intracellular ligand-gated ion channel activity1.73E-02
83GO:0003712: transcription cofactor activity1.73E-02
84GO:0004970: ionotropic glutamate receptor activity1.73E-02
85GO:0008146: sulfotransferase activity1.73E-02
86GO:0005516: calmodulin binding1.74E-02
87GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.76E-02
88GO:0051287: NAD binding1.83E-02
89GO:0004842: ubiquitin-protein transferase activity1.87E-02
90GO:0016298: lipase activity2.11E-02
91GO:0008810: cellulase activity2.62E-02
92GO:0061630: ubiquitin protein ligase activity2.76E-02
93GO:0047134: protein-disulfide reductase activity2.94E-02
94GO:0052689: carboxylic ester hydrolase activity2.94E-02
95GO:0015035: protein disulfide oxidoreductase activity2.98E-02
96GO:0016746: transferase activity, transferring acyl groups2.98E-02
97GO:0008080: N-acetyltransferase activity3.28E-02
98GO:0004791: thioredoxin-disulfide reductase activity3.45E-02
99GO:0016758: transferase activity, transferring hexosyl groups3.53E-02
100GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.17E-02
101GO:0030246: carbohydrate binding4.29E-02
102GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity4.55E-02
103GO:0008237: metallopeptidase activity4.55E-02
104GO:0008483: transaminase activity4.55E-02
105GO:0019825: oxygen binding4.65E-02
106GO:0005507: copper ion binding4.65E-02
107GO:0043565: sequence-specific DNA binding4.66E-02
108GO:0016597: amino acid binding4.75E-02
109GO:0051213: dioxygenase activity4.94E-02
110GO:0015250: water channel activity4.94E-02
RankGO TermAdjusted P value
1GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
2GO:0005783: endoplasmic reticulum9.09E-14
3GO:0005788: endoplasmic reticulum lumen1.27E-13
4GO:0005886: plasma membrane1.75E-11
5GO:0016021: integral component of membrane6.23E-06
6GO:0030134: ER to Golgi transport vesicle6.33E-06
7GO:0005789: endoplasmic reticulum membrane9.63E-05
8GO:0005829: cytosol2.04E-04
9GO:0045252: oxoglutarate dehydrogenase complex3.75E-04
10GO:0019773: proteasome core complex, alpha-subunit complex5.17E-04
11GO:0009505: plant-type cell wall6.18E-04
12GO:0032580: Golgi cisterna membrane7.59E-04
13GO:0005901: caveola8.15E-04
14GO:0016020: membrane8.50E-04
15GO:0005765: lysosomal membrane9.79E-04
16GO:0005774: vacuolar membrane1.33E-03
17GO:0009506: plasmodesma1.70E-03
18GO:0005775: vacuolar lumen1.91E-03
19GO:0030658: transport vesicle membrane1.91E-03
20GO:0005839: proteasome core complex2.39E-03
21GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane2.56E-03
22GO:0031372: UBC13-MMS2 complex2.56E-03
23GO:0030660: Golgi-associated vesicle membrane2.56E-03
24GO:0005801: cis-Golgi network4.88E-03
25GO:0016592: mediator complex5.18E-03
26GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane5.77E-03
27GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane6.70E-03
28GO:0009507: chloroplast7.02E-03
29GO:0000148: 1,3-beta-D-glucan synthase complex7.69E-03
30GO:0000326: protein storage vacuole7.69E-03
31GO:0048046: apoplast9.44E-03
32GO:0030665: clathrin-coated vesicle membrane9.82E-03
33GO:0005740: mitochondrial envelope1.10E-02
34GO:0017119: Golgi transport complex1.10E-02
35GO:0005618: cell wall1.17E-02
36GO:0031012: extracellular matrix1.46E-02
37GO:0046658: anchored component of plasma membrane1.62E-02
38GO:0030176: integral component of endoplasmic reticulum membrane1.73E-02
39GO:0031225: anchored component of membrane1.85E-02
40GO:0005887: integral component of plasma membrane1.88E-02
41GO:0000502: proteasome complex2.03E-02
42GO:0005741: mitochondrial outer membrane2.30E-02
43GO:0005773: vacuole2.37E-02
44GO:0009504: cell plate3.63E-02
45GO:0005623: cell3.72E-02
46GO:0005576: extracellular region4.17E-02
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Gene type



Gene DE type