co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G16600

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006983: ER overload response	0.00E+00
2	GO:0010398: xylogalacturonan metabolic process	0.00E+00
3	GO:0002376: immune system process	0.00E+00
4	GO:0000162: tryptophan biosynthetic process	2.98E-08
5	GO:0009627: systemic acquired resistance	9.75E-07
6	GO:0010043: response to zinc ion	1.92E-06
7	GO:0034976: response to endoplasmic reticulum stress	3.25E-06
8	GO:0006564: L-serine biosynthetic process	7.69E-06
9	GO:0006014: D-ribose metabolic process	1.18E-05
10	GO:0046686: response to cadmium ion	2.56E-05
11	GO:0010266: response to vitamin B1	6.74E-05
12	GO:0009700: indole phytoalexin biosynthetic process	6.74E-05
13	GO:0010230: alternative respiration	6.74E-05
14	GO:0052544: defense response by callose deposition in cell wall	8.50E-05
15	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	1.62E-04
16	GO:0043066: negative regulation of apoptotic process	1.62E-04
17	GO:0045454: cell redox homeostasis	2.12E-04
18	GO:0042256: mature ribosome assembly	2.75E-04
19	GO:1902626: assembly of large subunit precursor of preribosome	2.75E-04
20	GO:0009625: response to insect	2.77E-04
21	GO:0009414: response to water deprivation	3.99E-04
22	GO:0019252: starch biosynthetic process	4.39E-04
23	GO:0010188: response to microbial phytotoxin	5.32E-04
24	GO:0070534: protein K63-linked ubiquitination	5.32E-04
25	GO:0048830: adventitious root development	5.32E-04
26	GO:0000460: maturation of 5.8S rRNA	5.32E-04
27	GO:0010150: leaf senescence	5.47E-04
28	GO:0005513: detection of calcium ion	6.73E-04
29	GO:0009697: salicylic acid biosynthetic process	6.73E-04
30	GO:0009759: indole glucosinolate biosynthetic process	8.23E-04
31	GO:0006301: postreplication repair	8.23E-04
32	GO:0000470: maturation of LSU-rRNA	8.23E-04
33	GO:0009407: toxin catabolic process	9.50E-04
34	GO:0000054: ribosomal subunit export from nucleus	9.79E-04
35	GO:0009612: response to mechanical stimulus	9.79E-04
36	GO:0006457: protein folding	1.06E-03
37	GO:0006099: tricarboxylic acid cycle	1.13E-03
38	GO:0006102: isocitrate metabolic process	1.32E-03
39	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	1.32E-03
40	GO:0009819: drought recovery	1.32E-03
41	GO:0030968: endoplasmic reticulum unfolded protein response	1.50E-03
42	GO:0010120: camalexin biosynthetic process	1.50E-03
43	GO:0010112: regulation of systemic acquired resistance	1.69E-03
44	GO:0010205: photoinhibition	1.89E-03
45	GO:0043067: regulation of programmed cell death	1.89E-03
46	GO:0042742: defense response to bacterium	2.09E-03
47	GO:0043069: negative regulation of programmed cell death	2.10E-03
48	GO:0009641: shade avoidance	2.10E-03
49	GO:0006979: response to oxidative stress	2.11E-03
50	GO:0009684: indoleacetic acid biosynthetic process	2.31E-03
51	GO:0000038: very long-chain fatty acid metabolic process	2.31E-03
52	GO:0009698: phenylpropanoid metabolic process	2.31E-03
53	GO:0009682: induced systemic resistance	2.31E-03
54	GO:0010039: response to iron ion	3.23E-03
55	GO:0010053: root epidermal cell differentiation	3.23E-03
56	GO:0009969: xyloglucan biosynthetic process	3.23E-03
57	GO:0009735: response to cytokinin	3.67E-03
58	GO:2000377: regulation of reactive oxygen species metabolic process	3.73E-03
59	GO:0006487: protein N-linked glycosylation	3.73E-03
60	GO:0080147: root hair cell development	3.73E-03
61	GO:0009790: embryo development	3.79E-03
62	GO:0009695: jasmonic acid biosynthetic process	3.99E-03
63	GO:0040008: regulation of growth	4.28E-03
64	GO:0031348: negative regulation of defense response	4.53E-03
65	GO:0006012: galactose metabolic process	4.81E-03
66	GO:0071215: cellular response to abscisic acid stimulus	4.81E-03
67	GO:0009306: protein secretion	5.09E-03
68	GO:0009617: response to bacterium	5.34E-03
69	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	5.38E-03
70	GO:0000413: protein peptidyl-prolyl isomerization	5.68E-03
71	GO:0042631: cellular response to water deprivation	5.68E-03
72	GO:0006662: glycerol ether metabolic process	5.98E-03
73	GO:0045489: pectin biosynthetic process	5.98E-03
74	GO:0006885: regulation of pH	5.98E-03
75	GO:0009646: response to absence of light	6.28E-03
76	GO:0009851: auxin biosynthetic process	6.60E-03
77	GO:0000302: response to reactive oxygen species	6.91E-03
78	GO:0009630: gravitropism	7.24E-03
79	GO:0030163: protein catabolic process	7.57E-03
80	GO:0006952: defense response	8.36E-03
81	GO:0006508: proteolysis	1.14E-02
82	GO:0016051: carbohydrate biosynthetic process	1.27E-02
83	GO:0045087: innate immune response	1.27E-02
84	GO:0034599: cellular response to oxidative stress	1.31E-02
85	GO:0009651: response to salt stress	1.31E-02
86	GO:0009409: response to cold	1.48E-02
87	GO:0010114: response to red light	1.52E-02
88	GO:0009644: response to high light intensity	1.61E-02
89	GO:0009636: response to toxic substance	1.65E-02
90	GO:0006855: drug transmembrane transport	1.70E-02
91	GO:0005975: carbohydrate metabolic process	1.71E-02
92	GO:0006812: cation transport	1.79E-02
93	GO:0009846: pollen germination	1.79E-02
94	GO:0006813: potassium ion transport	1.88E-02
95	GO:0051603: proteolysis involved in cellular protein catabolic process	1.93E-02
96	GO:0048316: seed development	2.17E-02
97	GO:0009624: response to nematode	2.42E-02
98	GO:0018105: peptidyl-serine phosphorylation	2.47E-02
99	GO:0055114: oxidation-reduction process	2.62E-02
100	GO:0006511: ubiquitin-dependent protein catabolic process	3.06E-02
101	GO:0006633: fatty acid biosynthetic process	3.33E-02
102	GO:0006413: translational initiation	3.39E-02
103	GO:0006470: protein dephosphorylation	3.92E-02
104	GO:0009826: unidimensional cell growth	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
2	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
3	GO:0003756: protein disulfide isomerase activity	8.76E-06
4	GO:0004747: ribokinase activity	1.69E-05
5	GO:0043295: glutathione binding	2.32E-05
6	GO:0008865: fructokinase activity	3.06E-05
7	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	6.74E-05
8	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	6.74E-05
9	GO:0004425: indole-3-glycerol-phosphate synthase activity	6.74E-05
10	GO:0033984: indole-3-glycerol-phosphate lyase activity	6.74E-05
11	GO:0004048: anthranilate phosphoribosyltransferase activity	6.74E-05
12	GO:0004190: aspartic-type endopeptidase activity	1.49E-04
13	GO:0004338: glucan exo-1,3-beta-glucosidase activity	1.62E-04
14	GO:0004566: beta-glucuronidase activity	1.62E-04
15	GO:0004617: phosphoglycerate dehydrogenase activity	1.62E-04
16	GO:0008430: selenium binding	2.75E-04
17	GO:0016656: monodehydroascorbate reductase (NADH) activity	3.98E-04
18	GO:0043023: ribosomal large subunit binding	3.98E-04
19	GO:0004449: isocitrate dehydrogenase (NAD+) activity	3.98E-04
20	GO:0004834: tryptophan synthase activity	5.32E-04
21	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	6.73E-04
22	GO:0035252: UDP-xylosyltransferase activity	8.23E-04
23	GO:0004602: glutathione peroxidase activity	9.79E-04
24	GO:0004656: procollagen-proline 4-dioxygenase activity	9.79E-04
25	GO:0043022: ribosome binding	1.32E-03
26	GO:0004034: aldose 1-epimerase activity	1.32E-03
27	GO:0004364: glutathione transferase activity	1.33E-03
28	GO:0016207: 4-coumarate-CoA ligase activity	1.69E-03
29	GO:0016746: transferase activity, transferring acyl groups	2.69E-03
30	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	2.99E-03
31	GO:0004298: threonine-type endopeptidase activity	4.26E-03
32	GO:0008810: cellulase activity	4.81E-03
33	GO:0047134: protein-disulfide reductase activity	5.38E-03
34	GO:0005451: monovalent cation:proton antiporter activity	5.68E-03
35	GO:0004791: thioredoxin-disulfide reductase activity	6.28E-03
36	GO:0016853: isomerase activity	6.28E-03
37	GO:0015299: solute:proton antiporter activity	6.28E-03
38	GO:0005507: copper ion binding	6.44E-03
39	GO:0015385: sodium:proton antiporter activity	7.57E-03
40	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	7.57E-03
41	GO:0008233: peptidase activity	8.42E-03
42	GO:0016597: amino acid binding	8.59E-03
43	GO:0005509: calcium ion binding	9.09E-03
44	GO:0009931: calcium-dependent protein serine/threonine kinase activity	9.65E-03
45	GO:0004683: calmodulin-dependent protein kinase activity	1.00E-02
46	GO:0030247: polysaccharide binding	1.00E-02
47	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.08E-02
48	GO:0015238: drug transmembrane transporter activity	1.11E-02
49	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.11E-02
50	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.27E-02
51	GO:0003746: translation elongation factor activity	1.27E-02
52	GO:0008422: beta-glucosidase activity	1.35E-02
53	GO:0004185: serine-type carboxypeptidase activity	1.52E-02
54	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.70E-02
55	GO:0051287: NAD binding	1.74E-02
56	GO:0016298: lipase activity	1.93E-02
57	GO:0031625: ubiquitin protein ligase binding	2.02E-02
58	GO:0016874: ligase activity	2.31E-02
59	GO:0015035: protein disulfide oxidoreductase activity	2.47E-02
60	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.98E-02
61	GO:0030246: carbohydrate binding	3.04E-02
62	GO:0019825: oxygen binding	3.21E-02
63	GO:0015297: antiporter activity	3.45E-02
64	GO:0003743: translation initiation factor activity	3.98E-02
65	GO:0005506: iron ion binding	4.48E-02
66	GO:0016788: hydrolase activity, acting on ester bonds	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
2	GO:0005783: endoplasmic reticulum	1.72E-07
3	GO:0005788: endoplasmic reticulum lumen	3.72E-05
4	GO:0048046: apoplast	4.69E-05
5	GO:0045252: oxoglutarate dehydrogenase complex	6.74E-05
6	GO:0005765: lysosomal membrane	8.50E-05
7	GO:0009505: plant-type cell wall	1.10E-04
8	GO:0009570: chloroplast stroma	2.58E-04
9	GO:0005618: cell wall	3.11E-04
10	GO:0031372: UBC13-MMS2 complex	5.32E-04
11	GO:0030660: Golgi-associated vesicle membrane	5.32E-04
12	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	5.32E-04
13	GO:0008250: oligosaccharyltransferase complex	6.73E-04
14	GO:0005789: endoplasmic reticulum membrane	8.82E-04
15	GO:0030687: preribosome, large subunit precursor	1.14E-03
16	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	1.32E-03
17	GO:0005829: cytosol	1.44E-03
18	GO:0000326: protein storage vacuole	1.50E-03
19	GO:0019773: proteasome core complex, alpha-subunit complex	1.50E-03
20	GO:0005839: proteasome core complex	4.26E-03
21	GO:0009507: chloroplast	5.75E-03
22	GO:0005773: vacuole	7.74E-03
23	GO:0005886: plasma membrane	1.09E-02
24	GO:0009536: plastid	1.31E-02
25	GO:0016020: membrane	1.59E-02
26	GO:0000502: proteasome complex	1.88E-02
27	GO:0005635: nuclear envelope	1.97E-02
28	GO:0009579: thylakoid	2.70E-02
29	GO:0005802: trans-Golgi network	3.61E-02
30	GO:0005768: endosome	4.10E-02
31	GO:0046658: anchored component of plasma membrane	4.35E-02
32	GO:0005774: vacuolar membrane	4.76E-02