co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G15390

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance	0.00E+00
2	GO:0042891: antibiotic transport	0.00E+00
3	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
4	GO:0045792: negative regulation of cell size	0.00E+00
5	GO:1900367: positive regulation of defense response to insect	0.00E+00
6	GO:0051553: flavone biosynthetic process	0.00E+00
7	GO:0071327: cellular response to trehalose stimulus	0.00E+00
8	GO:0009617: response to bacterium	2.12E-13
9	GO:0042742: defense response to bacterium	7.09E-12
10	GO:0009816: defense response to bacterium, incompatible interaction	4.29E-09
11	GO:0051707: response to other organism	4.31E-08
12	GO:0052544: defense response by callose deposition in cell wall	7.15E-08
13	GO:0009626: plant-type hypersensitive response	2.35E-07
14	GO:0009759: indole glucosinolate biosynthetic process	2.95E-07
15	GO:0006952: defense response	3.44E-07
16	GO:0010200: response to chitin	9.45E-07
17	GO:0009625: response to insect	9.78E-07
18	GO:0031349: positive regulation of defense response	1.05E-06
19	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	1.05E-06
20	GO:0009682: induced systemic resistance	6.50E-06
21	GO:0009627: systemic acquired resistance	9.28E-06
22	GO:0080142: regulation of salicylic acid biosynthetic process	1.71E-05
23	GO:0000162: tryptophan biosynthetic process	1.89E-05
24	GO:0009414: response to water deprivation	2.12E-05
25	GO:0006979: response to oxidative stress	2.36E-05
26	GO:0050832: defense response to fungus	2.82E-05
27	GO:0009751: response to salicylic acid	3.45E-05
28	GO:0071456: cellular response to hypoxia	3.60E-05
29	GO:0010942: positive regulation of cell death	4.18E-05
30	GO:0009612: response to mechanical stimulus	5.87E-05
31	GO:0010120: camalexin biosynthetic process	1.27E-04
32	GO:2000031: regulation of salicylic acid mediated signaling pathway	1.27E-04
33	GO:0051245: negative regulation of cellular defense response	1.46E-04
34	GO:0009609: response to symbiotic bacterium	1.46E-04
35	GO:0009700: indole phytoalexin biosynthetic process	1.46E-04
36	GO:0010230: alternative respiration	1.46E-04
37	GO:0006643: membrane lipid metabolic process	1.46E-04
38	GO:1901183: positive regulation of camalexin biosynthetic process	1.46E-04
39	GO:0060862: negative regulation of floral organ abscission	1.46E-04
40	GO:0010266: response to vitamin B1	1.46E-04
41	GO:0010112: regulation of systemic acquired resistance	1.56E-04
42	GO:0043069: negative regulation of programmed cell death	2.22E-04
43	GO:0009737: response to abscisic acid	2.25E-04
44	GO:0009407: toxin catabolic process	2.67E-04
45	GO:0002213: defense response to insect	2.99E-04
46	GO:0010150: leaf senescence	3.00E-04
47	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	3.33E-04
48	GO:0010541: acropetal auxin transport	3.33E-04
49	GO:0010618: aerenchyma formation	3.33E-04
50	GO:0002237: response to molecule of bacterial origin	3.85E-04
51	GO:0009636: response to toxic substance	5.19E-04
52	GO:0009863: salicylic acid mediated signaling pathway	5.33E-04
53	GO:0048281: inflorescence morphogenesis	5.47E-04
54	GO:0010581: regulation of starch biosynthetic process	5.47E-04
55	GO:0055074: calcium ion homeostasis	5.47E-04
56	GO:0031347: regulation of defense response	5.69E-04
57	GO:0016998: cell wall macromolecule catabolic process	6.43E-04
58	GO:0006468: protein phosphorylation	6.59E-04
59	GO:0009814: defense response, incompatible interaction	7.02E-04
60	GO:0009651: response to salt stress	7.11E-04
61	GO:0009723: response to ethylene	7.41E-04
62	GO:0002239: response to oomycetes	7.83E-04
63	GO:0043207: response to external biotic stimulus	7.83E-04
64	GO:0015700: arsenite transport	7.83E-04
65	GO:0006612: protein targeting to membrane	7.83E-04
66	GO:0000187: activation of MAPK activity	7.83E-04
67	GO:0034219: carbohydrate transmembrane transport	7.83E-04
68	GO:0048830: adventitious root development	1.04E-03
69	GO:1902584: positive regulation of response to water deprivation	1.04E-03
70	GO:0010363: regulation of plant-type hypersensitive response	1.04E-03
71	GO:0010600: regulation of auxin biosynthetic process	1.04E-03
72	GO:0010508: positive regulation of autophagy	1.04E-03
73	GO:0009652: thigmotropism	1.04E-03
74	GO:0061025: membrane fusion	1.11E-03
75	GO:0009646: response to absence of light	1.11E-03
76	GO:0009851: auxin biosynthetic process	1.19E-03
77	GO:0009409: response to cold	1.20E-03
78	GO:0010193: response to ozone	1.27E-03
79	GO:0000302: response to reactive oxygen species	1.27E-03
80	GO:0009697: salicylic acid biosynthetic process	1.31E-03
81	GO:0046283: anthocyanin-containing compound metabolic process	1.31E-03
82	GO:0010225: response to UV-C	1.31E-03
83	GO:0060918: auxin transport	1.61E-03
84	GO:0000911: cytokinesis by cell plate formation	1.93E-03
85	GO:0010310: regulation of hydrogen peroxide metabolic process	1.93E-03
86	GO:0071446: cellular response to salicylic acid stimulus	2.27E-03
87	GO:0070370: cellular heat acclimation	2.27E-03
88	GO:0010044: response to aluminum ion	2.27E-03
89	GO:0009610: response to symbiotic fungus	2.27E-03
90	GO:0046470: phosphatidylcholine metabolic process	2.27E-03
91	GO:0009787: regulation of abscisic acid-activated signaling pathway	2.63E-03
92	GO:0030091: protein repair	2.63E-03
93	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	3.00E-03
94	GO:0010497: plasmodesmata-mediated intercellular transport	3.00E-03
95	GO:0010204: defense response signaling pathway, resistance gene-independent	3.00E-03
96	GO:0043562: cellular response to nitrogen levels	3.00E-03
97	GO:0046685: response to arsenic-containing substance	3.40E-03
98	GO:0006887: exocytosis	3.53E-03
99	GO:0042542: response to hydrogen peroxide	3.68E-03
100	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	3.81E-03
101	GO:2000280: regulation of root development	3.81E-03
102	GO:1900426: positive regulation of defense response to bacterium	3.81E-03
103	GO:0006995: cellular response to nitrogen starvation	4.23E-03
104	GO:0009870: defense response signaling pathway, resistance gene-dependent	4.23E-03
105	GO:0006032: chitin catabolic process	4.23E-03
106	GO:0009641: shade avoidance	4.23E-03
107	GO:0010215: cellulose microfibril organization	4.23E-03
108	GO:0009684: indoleacetic acid biosynthetic process	4.67E-03
109	GO:0010105: negative regulation of ethylene-activated signaling pathway	5.13E-03
110	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	5.13E-03
111	GO:0000266: mitochondrial fission	5.13E-03
112	GO:0034605: cellular response to heat	6.09E-03
113	GO:0007034: vacuolar transport	6.09E-03
114	GO:0009266: response to temperature stimulus	6.09E-03
115	GO:0042343: indole glucosinolate metabolic process	6.59E-03
116	GO:0070588: calcium ion transmembrane transport	6.59E-03
117	GO:0009969: xyloglucan biosynthetic process	6.59E-03
118	GO:0009620: response to fungus	6.68E-03
119	GO:0016042: lipid catabolic process	7.21E-03
120	GO:0009753: response to jasmonic acid	8.18E-03
121	GO:0010073: meristem maintenance	8.18E-03
122	GO:0048278: vesicle docking	8.73E-03
123	GO:0035428: hexose transmembrane transport	9.30E-03
124	GO:2000022: regulation of jasmonic acid mediated signaling pathway	9.30E-03
125	GO:0031348: negative regulation of defense response	9.30E-03
126	GO:0071215: cellular response to abscisic acid stimulus	9.89E-03
127	GO:0009411: response to UV	9.89E-03
128	GO:0006012: galactose metabolic process	9.89E-03
129	GO:0042147: retrograde transport, endosome to Golgi	1.11E-02
130	GO:0042631: cellular response to water deprivation	1.17E-02
131	GO:0010051: xylem and phloem pattern formation	1.17E-02
132	GO:0040008: regulation of growth	1.21E-02
133	GO:0008360: regulation of cell shape	1.24E-02
134	GO:0010197: polar nucleus fusion	1.24E-02
135	GO:0046323: glucose import	1.24E-02
136	GO:0006623: protein targeting to vacuole	1.37E-02
137	GO:0002229: defense response to oomycetes	1.43E-02
138	GO:0006891: intra-Golgi vesicle-mediated transport	1.43E-02
139	GO:0007166: cell surface receptor signaling pathway	1.45E-02
140	GO:0015031: protein transport	1.47E-02
141	GO:0016032: viral process	1.50E-02
142	GO:0019761: glucosinolate biosynthetic process	1.50E-02
143	GO:0009630: gravitropism	1.50E-02
144	GO:0030163: protein catabolic process	1.57E-02
145	GO:0019760: glucosinolate metabolic process	1.64E-02
146	GO:0006904: vesicle docking involved in exocytosis	1.72E-02
147	GO:0051607: defense response to virus	1.79E-02
148	GO:0006508: proteolysis	1.86E-02
149	GO:0001666: response to hypoxia	1.86E-02
150	GO:0046686: response to cadmium ion	2.00E-02
151	GO:0006906: vesicle fusion	2.01E-02
152	GO:0006950: response to stress	2.09E-02
153	GO:0016049: cell growth	2.17E-02
154	GO:0009817: defense response to fungus, incompatible interaction	2.25E-02
155	GO:0008219: cell death	2.25E-02
156	GO:0009813: flavonoid biosynthetic process	2.33E-02
157	GO:0010311: lateral root formation	2.33E-02
158	GO:0048527: lateral root development	2.49E-02
159	GO:0009631: cold acclimation	2.49E-02
160	GO:0010119: regulation of stomatal movement	2.49E-02
161	GO:0016192: vesicle-mediated transport	2.57E-02
162	GO:0044550: secondary metabolite biosynthetic process	2.65E-02
163	GO:0009867: jasmonic acid mediated signaling pathway	2.66E-02
164	GO:0055114: oxidation-reduction process	2.66E-02
165	GO:0006099: tricarboxylic acid cycle	2.75E-02
166	GO:0010114: response to red light	3.19E-02
167	GO:0009965: leaf morphogenesis	3.47E-02
168	GO:0006629: lipid metabolic process	3.60E-02
169	GO:0000165: MAPK cascade	3.65E-02

Rank	GO Term	Adjusted P value
1	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
2	GO:0033759: flavone synthase activity	0.00E+00
3	GO:0015370: solute:sodium symporter activity	0.00E+00
4	GO:0047631: ADP-ribose diphosphatase activity	2.79E-05
5	GO:0000210: NAD+ diphosphatase activity	4.18E-05
6	GO:0043295: glutathione binding	7.88E-05
7	GO:0033984: indole-3-glycerol-phosphate lyase activity	1.46E-04
8	GO:0080042: ADP-glucose pyrophosphohydrolase activity	1.46E-04
9	GO:2001147: camalexin binding	1.46E-04
10	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.46E-04
11	GO:2001227: quercitrin binding	1.46E-04
12	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.12E-04
13	GO:0017110: nucleoside-diphosphatase activity	3.33E-04
14	GO:0080041: ADP-ribose pyrophosphohydrolase activity	3.33E-04
15	GO:0047364: desulfoglucosinolate sulfotransferase activity	3.33E-04
16	GO:0015105: arsenite transmembrane transporter activity	3.33E-04
17	GO:0016301: kinase activity	3.36E-04
18	GO:0004364: glutathione transferase activity	4.24E-04
19	GO:0004049: anthranilate synthase activity	5.47E-04
20	GO:0005509: calcium ion binding	5.65E-04
21	GO:0035529: NADH pyrophosphatase activity	7.83E-04
22	GO:0015204: urea transmembrane transporter activity	1.04E-03
23	GO:0004834: tryptophan synthase activity	1.04E-03
24	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.31E-03
25	GO:0019825: oxygen binding	1.43E-03
26	GO:0005516: calmodulin binding	1.57E-03
27	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.83E-03
28	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	1.93E-03
29	GO:0004806: triglyceride lipase activity	2.13E-03
30	GO:0004683: calmodulin-dependent protein kinase activity	2.13E-03
31	GO:0005506: iron ion binding	2.58E-03
32	GO:0004034: aldose 1-epimerase activity	2.63E-03
33	GO:0004708: MAP kinase kinase activity	2.63E-03
34	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.63E-03
35	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	3.00E-03
36	GO:0003843: 1,3-beta-D-glucan synthase activity	3.00E-03
37	GO:0004630: phospholipase D activity	3.00E-03
38	GO:0005484: SNAP receptor activity	3.83E-03
39	GO:0004713: protein tyrosine kinase activity	4.23E-03
40	GO:0004568: chitinase activity	4.23E-03
41	GO:0051287: NAD binding	4.63E-03
42	GO:0004674: protein serine/threonine kinase activity	5.27E-03
43	GO:0016298: lipase activity	5.33E-03
44	GO:0005388: calcium-transporting ATPase activity	5.60E-03
45	GO:0005262: calcium channel activity	5.60E-03
46	GO:0020037: heme binding	5.89E-03
47	GO:0008146: sulfotransferase activity	6.59E-03
48	GO:0051119: sugar transmembrane transporter activity	6.59E-03
49	GO:0008061: chitin binding	6.59E-03
50	GO:0003712: transcription cofactor activity	6.59E-03
51	GO:0004190: aspartic-type endopeptidase activity	6.59E-03
52	GO:0008810: cellulase activity	9.89E-03
53	GO:0005355: glucose transmembrane transporter activity	1.30E-02
54	GO:0016853: isomerase activity	1.30E-02
55	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.72E-02
56	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.72E-02
57	GO:0015250: water channel activity	1.86E-02
58	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.01E-02
59	GO:0030247: polysaccharide binding	2.09E-02
60	GO:0030246: carbohydrate binding	2.25E-02
61	GO:0004222: metalloendopeptidase activity	2.41E-02
62	GO:0005507: copper ion binding	2.42E-02
63	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.49E-02
64	GO:0050897: cobalt ion binding	2.49E-02
65	GO:0030145: manganese ion binding	2.49E-02
66	GO:0061630: ubiquitin protein ligase activity	2.57E-02
67	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.66E-02
68	GO:0008422: beta-glucosidase activity	2.83E-02
69	GO:0000149: SNARE binding	2.83E-02
70	GO:0005525: GTP binding	2.90E-02
71	GO:0016787: hydrolase activity	3.19E-02
72	GO:0015293: symporter activity	3.47E-02
73	GO:0003924: GTPase activity	3.60E-02
74	GO:0046872: metal ion binding	4.11E-02
75	GO:0031625: ubiquitin protein ligase binding	4.24E-02
76	GO:0008234: cysteine-type peptidase activity	4.24E-02
77	GO:0045735: nutrient reservoir activity	4.44E-02
78	GO:0022857: transmembrane transporter activity	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	7.13E-09
2	GO:0005618: cell wall	8.14E-05
3	GO:0045252: oxoglutarate dehydrogenase complex	1.46E-04
4	GO:0005901: caveola	3.33E-04
5	GO:0005950: anthranilate synthase complex	3.33E-04
6	GO:0016021: integral component of membrane	7.10E-04
7	GO:0030658: transport vesicle membrane	7.83E-04
8	GO:0070062: extracellular exosome	7.83E-04
9	GO:0005775: vacuolar lumen	7.83E-04
10	GO:0009506: plasmodesma	1.11E-03
11	GO:0009504: cell plate	1.19E-03
12	GO:0005887: integral component of plasma membrane	2.34E-03
13	GO:0048046: apoplast	2.73E-03
14	GO:0046658: anchored component of plasma membrane	2.85E-03
15	GO:0000148: 1,3-beta-D-glucan synthase complex	3.00E-03
16	GO:0016020: membrane	3.28E-03
17	GO:0031902: late endosome membrane	3.53E-03
18	GO:0030665: clathrin-coated vesicle membrane	3.81E-03
19	GO:0005740: mitochondrial envelope	4.23E-03
20	GO:0017119: Golgi transport complex	4.23E-03
21	GO:0031012: extracellular matrix	5.60E-03
22	GO:0031225: anchored component of membrane	6.91E-03
23	GO:0005741: mitochondrial outer membrane	8.73E-03
24	GO:0005783: endoplasmic reticulum	1.11E-02
25	GO:0000145: exocyst	1.50E-02
26	GO:0005829: cytosol	1.92E-02
27	GO:0005788: endoplasmic reticulum lumen	1.94E-02
28	GO:0000151: ubiquitin ligase complex	2.25E-02
29	GO:0005774: vacuolar membrane	2.28E-02
30	GO:0031201: SNARE complex	3.01E-02
31	GO:0005576: extracellular region	3.09E-02
32	GO:0005773: vacuole	4.62E-02
33	GO:0009505: plant-type cell wall	4.94E-02
34	GO:0012505: endomembrane system	4.96E-02