GO Enrichment Analysis of Co-expressed Genes with
AT2G14880
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 2 | GO:0015742: alpha-ketoglutarate transport | 0.00E+00 |
| 3 | GO:0042407: cristae formation | 0.00E+00 |
| 4 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 5 | GO:0018160: peptidyl-pyrromethane cofactor linkage | 0.00E+00 |
| 6 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 7 | GO:0015995: chlorophyll biosynthetic process | 1.87E-05 |
| 8 | GO:0032544: plastid translation | 2.05E-05 |
| 9 | GO:0006779: porphyrin-containing compound biosynthetic process | 3.18E-05 |
| 10 | GO:0006782: protoporphyrinogen IX biosynthetic process | 3.85E-05 |
| 11 | GO:0006426: glycyl-tRNA aminoacylation | 4.45E-05 |
| 12 | GO:0006436: tryptophanyl-tRNA aminoacylation | 4.45E-05 |
| 13 | GO:1902458: positive regulation of stomatal opening | 4.45E-05 |
| 14 | GO:0010028: xanthophyll cycle | 4.45E-05 |
| 15 | GO:0006423: cysteinyl-tRNA aminoacylation | 1.10E-04 |
| 16 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 1.10E-04 |
| 17 | GO:0009306: protein secretion | 1.73E-04 |
| 18 | GO:0010581: regulation of starch biosynthetic process | 1.89E-04 |
| 19 | GO:0006241: CTP biosynthetic process | 2.78E-04 |
| 20 | GO:0006165: nucleoside diphosphate phosphorylation | 2.78E-04 |
| 21 | GO:0006228: UTP biosynthetic process | 2.78E-04 |
| 22 | GO:0051085: chaperone mediated protein folding requiring cofactor | 2.78E-04 |
| 23 | GO:0015729: oxaloacetate transport | 2.78E-04 |
| 24 | GO:0006221: pyrimidine nucleotide biosynthetic process | 3.73E-04 |
| 25 | GO:0071483: cellular response to blue light | 3.73E-04 |
| 26 | GO:0044205: 'de novo' UMP biosynthetic process | 3.73E-04 |
| 27 | GO:0019676: ammonia assimilation cycle | 3.73E-04 |
| 28 | GO:0015743: malate transport | 3.73E-04 |
| 29 | GO:0006183: GTP biosynthetic process | 3.73E-04 |
| 30 | GO:0071423: malate transmembrane transport | 4.75E-04 |
| 31 | GO:0045038: protein import into chloroplast thylakoid membrane | 4.75E-04 |
| 32 | GO:0009658: chloroplast organization | 4.79E-04 |
| 33 | GO:0042026: protein refolding | 6.94E-04 |
| 34 | GO:0017148: negative regulation of translation | 6.94E-04 |
| 35 | GO:0009793: embryo development ending in seed dormancy | 6.95E-04 |
| 36 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 8.11E-04 |
| 37 | GO:0045995: regulation of embryonic development | 8.11E-04 |
| 38 | GO:0042742: defense response to bacterium | 9.18E-04 |
| 39 | GO:2000070: regulation of response to water deprivation | 9.32E-04 |
| 40 | GO:0052543: callose deposition in cell wall | 9.32E-04 |
| 41 | GO:0009657: plastid organization | 1.06E-03 |
| 42 | GO:0019430: removal of superoxide radicals | 1.06E-03 |
| 43 | GO:0071482: cellular response to light stimulus | 1.06E-03 |
| 44 | GO:0006364: rRNA processing | 1.10E-03 |
| 45 | GO:0006783: heme biosynthetic process | 1.19E-03 |
| 46 | GO:0098656: anion transmembrane transport | 1.19E-03 |
| 47 | GO:0010380: regulation of chlorophyll biosynthetic process | 1.32E-03 |
| 48 | GO:0043067: regulation of programmed cell death | 1.32E-03 |
| 49 | GO:0045036: protein targeting to chloroplast | 1.47E-03 |
| 50 | GO:0043085: positive regulation of catalytic activity | 1.61E-03 |
| 51 | GO:0006352: DNA-templated transcription, initiation | 1.61E-03 |
| 52 | GO:0045037: protein import into chloroplast stroma | 1.77E-03 |
| 53 | GO:0009691: cytokinin biosynthetic process | 1.92E-03 |
| 54 | GO:0009790: embryo development | 2.23E-03 |
| 55 | GO:0090351: seedling development | 2.25E-03 |
| 56 | GO:0006418: tRNA aminoacylation for protein translation | 2.77E-03 |
| 57 | GO:0006457: protein folding | 2.87E-03 |
| 58 | GO:0007005: mitochondrion organization | 3.14E-03 |
| 59 | GO:0009411: response to UV | 3.33E-03 |
| 60 | GO:0016117: carotenoid biosynthetic process | 3.73E-03 |
| 61 | GO:0008033: tRNA processing | 3.93E-03 |
| 62 | GO:0010197: polar nucleus fusion | 4.14E-03 |
| 63 | GO:0009741: response to brassinosteroid | 4.14E-03 |
| 64 | GO:0006814: sodium ion transport | 4.35E-03 |
| 65 | GO:0015979: photosynthesis | 5.71E-03 |
| 66 | GO:0010027: thylakoid membrane organization | 6.15E-03 |
| 67 | GO:0009627: systemic acquired resistance | 6.64E-03 |
| 68 | GO:0048481: plant ovule development | 7.39E-03 |
| 69 | GO:0008219: cell death | 7.39E-03 |
| 70 | GO:0009409: response to cold | 7.42E-03 |
| 71 | GO:0006499: N-terminal protein myristoylation | 7.91E-03 |
| 72 | GO:0042542: response to hydrogen peroxide | 1.01E-02 |
| 73 | GO:0009585: red, far-red light phototransduction | 1.28E-02 |
| 74 | GO:0009624: response to nematode | 1.65E-02 |
| 75 | GO:0042744: hydrogen peroxide catabolic process | 2.12E-02 |
| 76 | GO:0006413: translational initiation | 2.31E-02 |
| 77 | GO:0009451: RNA modification | 2.47E-02 |
| 78 | GO:0042254: ribosome biogenesis | 3.36E-02 |
| 79 | GO:0015031: protein transport | 3.38E-02 |
| 80 | GO:0048366: leaf development | 3.73E-02 |
| 81 | GO:0006412: translation | 4.04E-02 |
| 82 | GO:0045454: cell redox homeostasis | 4.40E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004151: dihydroorotase activity | 0.00E+00 |
| 2 | GO:0004418: hydroxymethylbilane synthase activity | 0.00E+00 |
| 3 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 4 | GO:0015139: alpha-ketoglutarate transmembrane transporter activity | 0.00E+00 |
| 5 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 6 | GO:0052381: tRNA dimethylallyltransferase activity | 4.45E-05 |
| 7 | GO:0004830: tryptophan-tRNA ligase activity | 4.45E-05 |
| 8 | GO:0004820: glycine-tRNA ligase activity | 4.45E-05 |
| 9 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 4.45E-05 |
| 10 | GO:0000774: adenyl-nucleotide exchange factor activity | 1.10E-04 |
| 11 | GO:0015367: oxoglutarate:malate antiporter activity | 1.10E-04 |
| 12 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 1.10E-04 |
| 13 | GO:0004817: cysteine-tRNA ligase activity | 1.10E-04 |
| 14 | GO:0016851: magnesium chelatase activity | 2.78E-04 |
| 15 | GO:0015131: oxaloacetate transmembrane transporter activity | 2.78E-04 |
| 16 | GO:0004550: nucleoside diphosphate kinase activity | 2.78E-04 |
| 17 | GO:0043023: ribosomal large subunit binding | 2.78E-04 |
| 18 | GO:0001872: (1->3)-beta-D-glucan binding | 2.78E-04 |
| 19 | GO:0016987: sigma factor activity | 3.73E-04 |
| 20 | GO:0001053: plastid sigma factor activity | 3.73E-04 |
| 21 | GO:0015140: malate transmembrane transporter activity | 8.11E-04 |
| 22 | GO:0008047: enzyme activator activity | 1.47E-03 |
| 23 | GO:0051082: unfolded protein binding | 1.54E-03 |
| 24 | GO:0044183: protein binding involved in protein folding | 1.61E-03 |
| 25 | GO:0019843: rRNA binding | 1.92E-03 |
| 26 | GO:0005315: inorganic phosphate transmembrane transporter activity | 1.92E-03 |
| 27 | GO:0008565: protein transporter activity | 2.29E-03 |
| 28 | GO:0051087: chaperone binding | 2.77E-03 |
| 29 | GO:0008514: organic anion transmembrane transporter activity | 3.53E-03 |
| 30 | GO:0004812: aminoacyl-tRNA ligase activity | 3.73E-03 |
| 31 | GO:0005525: GTP binding | 3.88E-03 |
| 32 | GO:0004791: thioredoxin-disulfide reductase activity | 4.35E-03 |
| 33 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 5.22E-03 |
| 34 | GO:0008483: transaminase activity | 5.68E-03 |
| 35 | GO:0042803: protein homodimerization activity | 6.27E-03 |
| 36 | GO:0030247: polysaccharide binding | 6.89E-03 |
| 37 | GO:0003924: GTPase activity | 7.38E-03 |
| 38 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 7.39E-03 |
| 39 | GO:0003729: mRNA binding | 8.37E-03 |
| 40 | GO:0003746: translation elongation factor activity | 8.71E-03 |
| 41 | GO:0016887: ATPase activity | 1.14E-02 |
| 42 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.16E-02 |
| 43 | GO:0003735: structural constituent of ribosome | 1.21E-02 |
| 44 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.28E-02 |
| 45 | GO:0005507: copper ion binding | 1.87E-02 |
| 46 | GO:0003723: RNA binding | 2.04E-02 |
| 47 | GO:0030170: pyridoxal phosphate binding | 2.08E-02 |
| 48 | GO:0003743: translation initiation factor activity | 2.72E-02 |
| 49 | GO:0042802: identical protein binding | 2.88E-02 |
| 50 | GO:0000287: magnesium ion binding | 3.27E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 8.43E-32 |
| 2 | GO:0009570: chloroplast stroma | 2.42E-19 |
| 3 | GO:0009941: chloroplast envelope | 9.22E-18 |
| 4 | GO:0009579: thylakoid | 7.11E-12 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 8.25E-08 |
| 6 | GO:0009536: plastid | 1.20E-07 |
| 7 | GO:0033281: TAT protein transport complex | 4.81E-07 |
| 8 | GO:0009706: chloroplast inner membrane | 5.23E-06 |
| 9 | GO:0009654: photosystem II oxygen evolving complex | 1.17E-04 |
| 10 | GO:0009543: chloroplast thylakoid lumen | 1.75E-04 |
| 11 | GO:0015934: large ribosomal subunit | 5.96E-04 |
| 12 | GO:0009539: photosystem II reaction center | 1.06E-03 |
| 13 | GO:0000311: plastid large ribosomal subunit | 1.77E-03 |
| 14 | GO:0009508: plastid chromosome | 1.92E-03 |
| 15 | GO:0005623: cell | 1.97E-03 |
| 16 | GO:0005759: mitochondrial matrix | 2.40E-03 |
| 17 | GO:0009534: chloroplast thylakoid | 2.63E-03 |
| 18 | GO:0019898: extrinsic component of membrane | 4.56E-03 |
| 19 | GO:0005840: ribosome | 5.36E-03 |
| 20 | GO:0009295: nucleoid | 5.68E-03 |
| 21 | GO:0010319: stromule | 5.68E-03 |
| 22 | GO:0009707: chloroplast outer membrane | 7.39E-03 |
| 23 | GO:0031977: thylakoid lumen | 9.83E-03 |
| 24 | GO:0022626: cytosolic ribosome | 1.25E-02 |
| 25 | GO:0005622: intracellular | 2.34E-02 |
| 26 | GO:0048046: apoplast | 2.59E-02 |
| 27 | GO:0046658: anchored component of plasma membrane | 2.97E-02 |
| 28 | GO:0031969: chloroplast membrane | 3.87E-02 |