co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G04520

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009304: tRNA transcription	0.00E+00
2	GO:1902626: assembly of large subunit precursor of preribosome	1.23E-05
3	GO:0070301: cellular response to hydrogen peroxide	1.94E-05
4	GO:0006241: CTP biosynthetic process	1.94E-05
5	GO:0006165: nucleoside diphosphate phosphorylation	1.94E-05
6	GO:0006228: UTP biosynthetic process	1.94E-05
7	GO:0006183: GTP biosynthetic process	2.77E-05
8	GO:0000028: ribosomal small subunit assembly	8.28E-05
9	GO:0042255: ribosome assembly	8.28E-05
10	GO:0042254: ribosome biogenesis	1.15E-04
11	GO:0000387: spliceosomal snRNP assembly	1.24E-04
12	GO:0006626: protein targeting to mitochondrion	1.86E-04
13	GO:0048467: gynoecium development	2.03E-04
14	GO:0000027: ribosomal large subunit assembly	2.54E-04
15	GO:0007005: mitochondrion organization	3.08E-04
16	GO:0006412: translation	3.86E-04
17	GO:0006897: endocytosis	9.08E-04
18	GO:0015031: protein transport	9.50E-04
19	GO:0000398: mRNA splicing, via spliceosome	1.60E-03
20	GO:0006886: intracellular protein transport	3.74E-03
21	GO:0009734: auxin-activated signaling pathway	5.35E-03
22	GO:0046686: response to cadmium ion	1.40E-02
23	GO:0009793: embryo development ending in seed dormancy	1.86E-02
24	GO:0009651: response to salt stress	2.43E-02
25	GO:0006351: transcription, DNA-templated	4.05E-02

Rank	GO Term	Adjusted P value
1	GO:0001054: RNA polymerase I activity	4.48E-07
2	GO:0001056: RNA polymerase III activity	5.41E-07
3	GO:0004550: nucleoside diphosphate kinase activity	1.94E-05
4	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.41E-05
5	GO:0003735: structural constituent of ribosome	1.04E-04
6	GO:0001055: RNA polymerase II activity	1.24E-04
7	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	6.99E-04
8	GO:0003729: mRNA binding	1.10E-03
9	GO:0008565: protein transporter activity	1.90E-03
10	GO:0003723: RNA binding	5.59E-03
11	GO:0046983: protein dimerization activity	1.26E-02
12	GO:0005515: protein binding	1.85E-02
13	GO:0046872: metal ion binding	2.64E-02
14	GO:0003677: DNA binding	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0043186: P granule	0.00E+00
2	GO:0005736: DNA-directed RNA polymerase I complex	2.33E-07
3	GO:0005666: DNA-directed RNA polymerase III complex	2.95E-07
4	GO:0034719: SMN-Sm protein complex	1.23E-05
5	GO:0005682: U5 snRNP	2.77E-05
6	GO:0005687: U4 snRNP	3.71E-05
7	GO:0097526: spliceosomal tri-snRNP complex	3.71E-05
8	GO:0005689: U12-type spliceosomal complex	5.85E-05
9	GO:0071004: U2-type prespliceosome	8.28E-05
10	GO:0005763: mitochondrial small ribosomal subunit	1.10E-04
11	GO:0005685: U1 snRNP	1.10E-04
12	GO:0071011: precatalytic spliceosome	1.24E-04
13	GO:0030125: clathrin vesicle coat	1.39E-04
14	GO:0005686: U2 snRNP	1.39E-04
15	GO:0000418: DNA-directed RNA polymerase IV complex	1.39E-04
16	GO:0071013: catalytic step 2 spliceosome	1.54E-04
17	GO:0005665: DNA-directed RNA polymerase II, core complex	1.70E-04
18	GO:0019013: viral nucleocapsid	1.86E-04
19	GO:0005758: mitochondrial intermembrane space	2.54E-04
20	GO:0005905: clathrin-coated pit	2.90E-04
21	GO:0005840: ribosome	7.93E-04
22	GO:0005681: spliceosomal complex	1.29E-03
23	GO:0005732: small nucleolar ribonucleoprotein complex	1.54E-03
24	GO:0022627: cytosolic small ribosomal subunit	2.52E-03
25	GO:0022625: cytosolic large ribosomal subunit	3.36E-03
26	GO:0005743: mitochondrial inner membrane	4.02E-03
27	GO:0005777: peroxisome	6.90E-03
28	GO:0005829: cytosol	8.14E-03
29	GO:0005730: nucleolus	1.49E-02
30	GO:0005774: vacuolar membrane	2.48E-02
31	GO:0048046: apoplast	2.57E-02
32	GO:0005773: vacuole	3.37E-02