co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G03450

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2000541: positive regulation of protein geranylgeranylation	0.00E+00
2	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
3	GO:0018344: protein geranylgeranylation	7.07E-06
4	GO:0009270: response to humidity	6.42E-05
5	GO:0044376: RNA polymerase II complex import to nucleus	6.42E-05
6	GO:1990022: RNA polymerase III complex localization to nucleus	6.42E-05
7	GO:0046244: salicylic acid catabolic process	6.42E-05
8	GO:0019725: cellular homeostasis	1.55E-04
9	GO:0009626: plant-type hypersensitive response	2.10E-04
10	GO:0009814: defense response, incompatible interaction	2.37E-04
11	GO:0045793: positive regulation of cell size	2.63E-04
12	GO:0010186: positive regulation of cellular defense response	2.63E-04
13	GO:0010581: regulation of starch biosynthetic process	2.63E-04
14	GO:0002230: positive regulation of defense response to virus by host	2.63E-04
15	GO:1902290: positive regulation of defense response to oomycetes	3.82E-04
16	GO:0001676: long-chain fatty acid metabolic process	3.82E-04
17	GO:0000187: activation of MAPK activity	3.82E-04
18	GO:0002239: response to oomycetes	3.82E-04
19	GO:0000302: response to reactive oxygen species	4.41E-04
20	GO:0010193: response to ozone	4.41E-04
21	GO:2000038: regulation of stomatal complex development	5.10E-04
22	GO:0080037: negative regulation of cytokinin-activated signaling pathway	5.10E-04
23	GO:0060548: negative regulation of cell death	5.10E-04
24	GO:0046345: abscisic acid catabolic process	5.10E-04
25	GO:0000304: response to singlet oxygen	6.45E-04
26	GO:0009697: salicylic acid biosynthetic process	6.45E-04
27	GO:2000762: regulation of phenylpropanoid metabolic process	6.45E-04
28	GO:0007029: endoplasmic reticulum organization	6.45E-04
29	GO:0010405: arabinogalactan protein metabolic process	7.90E-04
30	GO:0018258: protein O-linked glycosylation via hydroxyproline	7.90E-04
31	GO:2000037: regulation of stomatal complex patterning	9.40E-04
32	GO:1900057: positive regulation of leaf senescence	1.10E-03
33	GO:1900056: negative regulation of leaf senescence	1.10E-03
34	GO:0006468: protein phosphorylation	1.19E-03
35	GO:0030091: protein repair	1.26E-03
36	GO:0006102: isocitrate metabolic process	1.26E-03
37	GO:0030162: regulation of proteolysis	1.26E-03
38	GO:0043562: cellular response to nitrogen levels	1.44E-03
39	GO:0009808: lignin metabolic process	1.44E-03
40	GO:0046685: response to arsenic-containing substance	1.62E-03
41	GO:1900426: positive regulation of defense response to bacterium	1.81E-03
42	GO:0048354: mucilage biosynthetic process involved in seed coat development	1.81E-03
43	GO:0042742: defense response to bacterium	1.89E-03
44	GO:0009870: defense response signaling pathway, resistance gene-dependent	2.01E-03
45	GO:0009688: abscisic acid biosynthetic process	2.01E-03
46	GO:0010229: inflorescence development	2.64E-03
47	GO:0009266: response to temperature stimulus	2.87E-03
48	GO:0070588: calcium ion transmembrane transport	3.09E-03
49	GO:0042343: indole glucosinolate metabolic process	3.09E-03
50	GO:0098542: defense response to other organism	4.08E-03
51	GO:0031348: negative regulation of defense response	4.34E-03
52	GO:0019748: secondary metabolic process	4.34E-03
53	GO:0010227: floral organ abscission	4.60E-03
54	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.69E-03
55	GO:0009851: auxin biosynthetic process	6.31E-03
56	GO:0002229: defense response to oomycetes	6.61E-03
57	GO:0007264: small GTPase mediated signal transduction	6.92E-03
58	GO:0030163: protein catabolic process	7.24E-03
59	GO:0006952: defense response	7.45E-03
60	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	8.31E-03
61	GO:0009816: defense response to bacterium, incompatible interaction	8.88E-03
62	GO:0045454: cell redox homeostasis	9.62E-03
63	GO:0009407: toxin catabolic process	1.10E-02
64	GO:0007568: aging	1.14E-02
65	GO:0009751: response to salicylic acid	1.17E-02
66	GO:0045087: innate immune response	1.22E-02
67	GO:0006099: tricarboxylic acid cycle	1.25E-02
68	GO:0008152: metabolic process	1.31E-02
69	GO:0006631: fatty acid metabolic process	1.37E-02
70	GO:0009636: response to toxic substance	1.58E-02
71	GO:0006855: drug transmembrane transport	1.62E-02
72	GO:0000165: MAPK cascade	1.66E-02
73	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.66E-02
74	GO:0006486: protein glycosylation	1.80E-02
75	GO:0009909: regulation of flower development	1.93E-02
76	GO:0006096: glycolytic process	2.02E-02
77	GO:0009620: response to fungus	2.16E-02
78	GO:0055114: oxidation-reduction process	2.29E-02
79	GO:0009624: response to nematode	2.31E-02
80	GO:0018105: peptidyl-serine phosphorylation	2.36E-02
81	GO:0006511: ubiquitin-dependent protein catabolic process	2.87E-02
82	GO:0009790: embryo development	3.02E-02
83	GO:0010150: leaf senescence	3.41E-02
84	GO:0007166: cell surface receptor signaling pathway	3.75E-02
85	GO:0009617: response to bacterium	3.86E-02
86	GO:0006979: response to oxidative stress	4.30E-02
87	GO:0006970: response to osmotic stress	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
2	GO:0005092: GDP-dissociation inhibitor activity	0.00E+00
3	GO:0080042: ADP-glucose pyrophosphohydrolase activity	6.42E-05
4	GO:0080041: ADP-ribose pyrophosphohydrolase activity	1.55E-04
5	GO:0017110: nucleoside-diphosphatase activity	1.55E-04
6	GO:0004298: threonine-type endopeptidase activity	2.16E-04
7	GO:0005093: Rab GDP-dissociation inhibitor activity	2.63E-04
8	GO:0004663: Rab geranylgeranyltransferase activity	2.63E-04
9	GO:0031176: endo-1,4-beta-xylanase activity	3.82E-04
10	GO:0004449: isocitrate dehydrogenase (NAD+) activity	3.82E-04
11	GO:0004031: aldehyde oxidase activity	5.10E-04
12	GO:0050302: indole-3-acetaldehyde oxidase activity	5.10E-04
13	GO:0005524: ATP binding	5.74E-04
14	GO:0051213: dioxygenase activity	6.32E-04
15	GO:0047631: ADP-ribose diphosphatase activity	6.45E-04
16	GO:0010294: abscisic acid glucosyltransferase activity	6.45E-04
17	GO:0017137: Rab GTPase binding	6.45E-04
18	GO:0016301: kinase activity	7.16E-04
19	GO:0000210: NAD+ diphosphatase activity	7.90E-04
20	GO:1990714: hydroxyproline O-galactosyltransferase activity	7.90E-04
21	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	9.40E-04
22	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	9.40E-04
23	GO:0102391: decanoate--CoA ligase activity	9.40E-04
24	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.02E-03
25	GO:0004467: long-chain fatty acid-CoA ligase activity	1.10E-03
26	GO:0004708: MAP kinase kinase activity	1.26E-03
27	GO:0005544: calcium-dependent phospholipid binding	1.26E-03
28	GO:0004674: protein serine/threonine kinase activity	1.66E-03
29	GO:0045309: protein phosphorylated amino acid binding	1.81E-03
30	GO:0030955: potassium ion binding	1.81E-03
31	GO:0004743: pyruvate kinase activity	1.81E-03
32	GO:0004713: protein tyrosine kinase activity	2.01E-03
33	GO:0009055: electron carrier activity	2.01E-03
34	GO:0019904: protein domain specific binding	2.21E-03
35	GO:0008794: arsenate reductase (glutaredoxin) activity	2.21E-03
36	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.24E-03
37	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.24E-03
38	GO:0008378: galactosyltransferase activity	2.42E-03
39	GO:0015035: protein disulfide oxidoreductase activity	2.52E-03
40	GO:0005262: calcium channel activity	2.64E-03
41	GO:0005388: calcium-transporting ATPase activity	2.64E-03
42	GO:0016758: transferase activity, transferring hexosyl groups	2.98E-03
43	GO:0003712: transcription cofactor activity	3.09E-03
44	GO:0004672: protein kinase activity	3.39E-03
45	GO:0008194: UDP-glycosyltransferase activity	4.69E-03
46	GO:0005516: calmodulin binding	6.36E-03
47	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	7.88E-03
48	GO:0008233: peptidase activity	7.90E-03
49	GO:0016597: amino acid binding	8.21E-03
50	GO:0005509: calcium ion binding	8.37E-03
51	GO:0009931: calcium-dependent protein serine/threonine kinase activity	9.22E-03
52	GO:0004683: calmodulin-dependent protein kinase activity	9.57E-03
53	GO:0004806: triglyceride lipase activity	9.57E-03
54	GO:0005096: GTPase activator activity	1.07E-02
55	GO:0015238: drug transmembrane transporter activity	1.07E-02
56	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.14E-02
57	GO:0046872: metal ion binding	1.35E-02
58	GO:0004842: ubiquitin-protein transferase activity	1.40E-02
59	GO:0004364: glutathione transferase activity	1.41E-02
60	GO:0051537: 2 iron, 2 sulfur cluster binding	1.54E-02
61	GO:0051287: NAD binding	1.66E-02
62	GO:0031625: ubiquitin protein ligase binding	1.93E-02
63	GO:0008026: ATP-dependent helicase activity	2.41E-02
64	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.24E-02
65	GO:0015297: antiporter activity	3.30E-02
66	GO:0005506: iron ion binding	4.20E-02
67	GO:0016757: transferase activity, transferring glycosyl groups	4.31E-02
68	GO:0008168: methyltransferase activity	4.52E-02
69	GO:0000287: magnesium ion binding	4.58E-02
70	GO:0003824: catalytic activity	4.68E-02
71	GO:0005215: transporter activity	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0005968: Rab-protein geranylgeranyltransferase complex	2.19E-06
2	GO:0019773: proteasome core complex, alpha-subunit complex	3.64E-05
3	GO:0005839: proteasome core complex	2.16E-04
4	GO:0046861: glyoxysomal membrane	2.63E-04
5	GO:0005829: cytosol	4.43E-04
6	GO:0005886: plasma membrane	9.01E-04
7	GO:0009514: glyoxysome	1.44E-03
8	GO:0000502: proteasome complex	1.73E-03
9	GO:0005737: cytoplasm	2.67E-03
10	GO:0016021: integral component of membrane	8.89E-03
11	GO:0019005: SCF ubiquitin ligase complex	1.03E-02
12	GO:0031966: mitochondrial membrane	1.71E-02
13	GO:0005635: nuclear envelope	1.89E-02
14	GO:0009706: chloroplast inner membrane	2.31E-02
15	GO:0016020: membrane	3.13E-02