co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G02930

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0051553: flavone biosynthetic process	0.00E+00
2	GO:0010398: xylogalacturonan metabolic process	0.00E+00
3	GO:0071327: cellular response to trehalose stimulus	0.00E+00
4	GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance	0.00E+00
5	GO:0042891: antibiotic transport	0.00E+00
6	GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	0.00E+00
7	GO:0045792: negative regulation of cell size	0.00E+00
8	GO:0002376: immune system process	0.00E+00
9	GO:1900367: positive regulation of defense response to insect	0.00E+00
10	GO:0006983: ER overload response	0.00E+00
11	GO:0009617: response to bacterium	1.47E-12
12	GO:0010200: response to chitin	5.73E-10
13	GO:0042742: defense response to bacterium	3.42E-09
14	GO:0009816: defense response to bacterium, incompatible interaction	8.19E-08
15	GO:0080142: regulation of salicylic acid biosynthetic process	3.53E-07
16	GO:0010150: leaf senescence	2.16E-06
17	GO:0009627: systemic acquired resistance	2.95E-06
18	GO:0031349: positive regulation of defense response	3.59E-06
19	GO:0009625: response to insect	7.33E-06
20	GO:0051707: response to other organism	1.55E-05
21	GO:0006468: protein phosphorylation	2.27E-05
22	GO:0048194: Golgi vesicle budding	2.89E-05
23	GO:0052544: defense response by callose deposition in cell wall	3.01E-05
24	GO:0060548: negative regulation of cell death	5.21E-05
25	GO:0009626: plant-type hypersensitive response	5.38E-05
26	GO:0006952: defense response	5.89E-05
27	GO:0000162: tryptophan biosynthetic process	8.05E-05
28	GO:0009414: response to water deprivation	8.11E-05
29	GO:0009759: indole glucosinolate biosynthetic process	1.20E-04
30	GO:0010942: positive regulation of cell death	1.20E-04
31	GO:0031348: negative regulation of defense response	1.44E-04
32	GO:0046470: phosphatidylcholine metabolic process	2.16E-04
33	GO:0070370: cellular heat acclimation	2.16E-04
34	GO:0009819: drought recovery	2.73E-04
35	GO:0060862: negative regulation of floral organ abscission	2.80E-04
36	GO:0010266: response to vitamin B1	2.80E-04
37	GO:0051245: negative regulation of cellular defense response	2.80E-04
38	GO:0009609: response to symbiotic bacterium	2.80E-04
39	GO:0009700: indole phytoalexin biosynthetic process	2.80E-04
40	GO:1901183: positive regulation of camalexin biosynthetic process	2.80E-04
41	GO:0071366: cellular response to indolebutyric acid stimulus	2.80E-04
42	GO:0010230: alternative respiration	2.80E-04
43	GO:0006643: membrane lipid metabolic process	2.80E-04
44	GO:0009651: response to salt stress	3.14E-04
45	GO:0009751: response to salicylic acid	3.19E-04
46	GO:0043562: cellular response to nitrogen levels	3.35E-04
47	GO:2000031: regulation of salicylic acid mediated signaling pathway	3.35E-04
48	GO:0010120: camalexin biosynthetic process	3.35E-04
49	GO:0000302: response to reactive oxygen species	3.40E-04
50	GO:0006979: response to oxidative stress	3.75E-04
51	GO:0010112: regulation of systemic acquired resistance	4.05E-04
52	GO:0051607: defense response to virus	5.11E-04
53	GO:0043069: negative regulation of programmed cell death	5.60E-04
54	GO:0002221: pattern recognition receptor signaling pathway	6.14E-04
55	GO:0015914: phospholipid transport	6.14E-04
56	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	6.14E-04
57	GO:0010618: aerenchyma formation	6.14E-04
58	GO:0006695: cholesterol biosynthetic process	6.14E-04
59	GO:0006212: uracil catabolic process	6.14E-04
60	GO:0043066: negative regulation of apoptotic process	6.14E-04
61	GO:0019483: beta-alanine biosynthetic process	6.14E-04
62	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	6.14E-04
63	GO:0010541: acropetal auxin transport	6.14E-04
64	GO:0009682: induced systemic resistance	6.45E-04
65	GO:0050832: defense response to fungus	6.48E-04
66	GO:0034605: cellular response to heat	9.39E-04
67	GO:0055074: calcium ion homeostasis	9.96E-04
68	GO:0051176: positive regulation of sulfur metabolic process	9.96E-04
69	GO:0048281: inflorescence morphogenesis	9.96E-04
70	GO:0042344: indole glucosinolate catabolic process	9.96E-04
71	GO:1900140: regulation of seedling development	9.96E-04
72	GO:0061158: 3'-UTR-mediated mRNA destabilization	9.96E-04
73	GO:0070588: calcium ion transmembrane transport	1.05E-03
74	GO:0009969: xyloglucan biosynthetic process	1.05E-03
75	GO:0046686: response to cadmium ion	1.08E-03
76	GO:0016042: lipid catabolic process	1.37E-03
77	GO:0000187: activation of MAPK activity	1.42E-03
78	GO:0034219: carbohydrate transmembrane transport	1.42E-03
79	GO:0002239: response to oomycetes	1.42E-03
80	GO:0043207: response to external biotic stimulus	1.42E-03
81	GO:0006612: protein targeting to membrane	1.42E-03
82	GO:0009399: nitrogen fixation	1.42E-03
83	GO:0007166: cell surface receptor signaling pathway	1.52E-03
84	GO:0016998: cell wall macromolecule catabolic process	1.56E-03
85	GO:0071456: cellular response to hypoxia	1.70E-03
86	GO:0009814: defense response, incompatible interaction	1.70E-03
87	GO:0006542: glutamine biosynthetic process	1.91E-03
88	GO:0048830: adventitious root development	1.91E-03
89	GO:1902584: positive regulation of response to water deprivation	1.91E-03
90	GO:0010363: regulation of plant-type hypersensitive response	1.91E-03
91	GO:0010600: regulation of auxin biosynthetic process	1.91E-03
92	GO:0010508: positive regulation of autophagy	1.91E-03
93	GO:0010188: response to microbial phytotoxin	1.91E-03
94	GO:0009737: response to abscisic acid	2.29E-03
95	GO:0031365: N-terminal protein amino acid modification	2.43E-03
96	GO:0010225: response to UV-C	2.43E-03
97	GO:0009697: salicylic acid biosynthetic process	2.43E-03
98	GO:0046283: anthocyanin-containing compound metabolic process	2.43E-03
99	GO:0061025: membrane fusion	2.73E-03
100	GO:0006014: D-ribose metabolic process	3.00E-03
101	GO:0015691: cadmium ion transport	3.00E-03
102	GO:0060918: auxin transport	3.00E-03
103	GO:1900425: negative regulation of defense response to bacterium	3.00E-03
104	GO:0009723: response to ethylene	3.02E-03
105	GO:0030163: protein catabolic process	3.57E-03
106	GO:0010310: regulation of hydrogen peroxide metabolic process	3.62E-03
107	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.62E-03
108	GO:0000911: cytokinesis by cell plate formation	3.62E-03
109	GO:0009612: response to mechanical stimulus	3.62E-03
110	GO:0010044: response to aluminum ion	4.26E-03
111	GO:0009610: response to symbiotic fungus	4.26E-03
112	GO:0043090: amino acid import	4.26E-03
113	GO:0071446: cellular response to salicylic acid stimulus	4.26E-03
114	GO:0009787: regulation of abscisic acid-activated signaling pathway	4.95E-03
115	GO:1900150: regulation of defense response to fungus	4.95E-03
116	GO:0030968: endoplasmic reticulum unfolded protein response	5.67E-03
117	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	5.67E-03
118	GO:0010497: plasmodesmata-mediated intercellular transport	5.67E-03
119	GO:0010204: defense response signaling pathway, resistance gene-independent	5.67E-03
120	GO:0008219: cell death	5.91E-03
121	GO:0009817: defense response to fungus, incompatible interaction	5.91E-03
122	GO:0009813: flavonoid biosynthetic process	6.21E-03
123	GO:0009832: plant-type cell wall biogenesis	6.21E-03
124	GO:0009407: toxin catabolic process	6.51E-03
125	GO:0048527: lateral root development	6.83E-03
126	GO:1900426: positive regulation of defense response to bacterium	7.22E-03
127	GO:2000280: regulation of root development	7.22E-03
128	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	7.22E-03
129	GO:0009409: response to cold	7.65E-03
130	GO:0009641: shade avoidance	8.04E-03
131	GO:0010215: cellulose microfibril organization	8.04E-03
132	GO:0006995: cellular response to nitrogen starvation	8.04E-03
133	GO:0006032: chitin catabolic process	8.04E-03
134	GO:0009684: indoleacetic acid biosynthetic process	8.90E-03
135	GO:0000038: very long-chain fatty acid metabolic process	8.90E-03
136	GO:0006887: exocytosis	8.91E-03
137	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	9.79E-03
138	GO:0000266: mitochondrial fission	9.79E-03
139	GO:0002213: defense response to insect	9.79E-03
140	GO:0010105: negative regulation of ethylene-activated signaling pathway	9.79E-03
141	GO:0006807: nitrogen compound metabolic process	1.07E-02
142	GO:0009826: unidimensional cell growth	1.08E-02
143	GO:0009636: response to toxic substance	1.09E-02
144	GO:0031347: regulation of defense response	1.17E-02
145	GO:0002237: response to molecule of bacterial origin	1.17E-02
146	GO:0007034: vacuolar transport	1.17E-02
147	GO:0006970: response to osmotic stress	1.25E-02
148	GO:0009833: plant-type primary cell wall biogenesis	1.37E-02
149	GO:0006508: proteolysis	1.44E-02
150	GO:2000377: regulation of reactive oxygen species metabolic process	1.47E-02
151	GO:0009863: salicylic acid mediated signaling pathway	1.47E-02
152	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.56E-02
153	GO:0016192: vesicle-mediated transport	1.59E-02
154	GO:0044550: secondary metabolite biosynthetic process	1.66E-02
155	GO:0031408: oxylipin biosynthetic process	1.68E-02
156	GO:0048278: vesicle docking	1.68E-02
157	GO:0009620: response to fungus	1.70E-02
158	GO:0016226: iron-sulfur cluster assembly	1.80E-02
159	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.80E-02
160	GO:0035428: hexose transmembrane transport	1.80E-02
161	GO:0006012: galactose metabolic process	1.91E-02
162	GO:0071215: cellular response to abscisic acid stimulus	1.91E-02
163	GO:0009742: brassinosteroid mediated signaling pathway	1.98E-02
164	GO:0010091: trichome branching	2.03E-02
165	GO:0015031: protein transport	2.04E-02
166	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.15E-02
167	GO:0042147: retrograde transport, endosome to Golgi	2.15E-02
168	GO:0000413: protein peptidyl-prolyl isomerization	2.27E-02
169	GO:0010051: xylem and phloem pattern formation	2.27E-02
170	GO:0042631: cellular response to water deprivation	2.27E-02
171	GO:0000271: polysaccharide biosynthetic process	2.27E-02
172	GO:0010197: polar nucleus fusion	2.39E-02
173	GO:0046323: glucose import	2.39E-02
174	GO:0008360: regulation of cell shape	2.39E-02
175	GO:0006885: regulation of pH	2.39E-02
176	GO:0045489: pectin biosynthetic process	2.39E-02
177	GO:0006662: glycerol ether metabolic process	2.39E-02
178	GO:0006629: lipid metabolic process	2.44E-02
179	GO:0009646: response to absence of light	2.52E-02
180	GO:0048544: recognition of pollen	2.52E-02
181	GO:0019252: starch biosynthetic process	2.65E-02
182	GO:0009851: auxin biosynthetic process	2.65E-02
183	GO:0006623: protein targeting to vacuole	2.65E-02
184	GO:0009753: response to jasmonic acid	2.66E-02
185	GO:0010193: response to ozone	2.78E-02
186	GO:0016132: brassinosteroid biosynthetic process	2.78E-02
187	GO:0002229: defense response to oomycetes	2.78E-02
188	GO:0006891: intra-Golgi vesicle-mediated transport	2.78E-02
189	GO:0016032: viral process	2.91E-02
190	GO:0019761: glucosinolate biosynthetic process	2.91E-02
191	GO:0006904: vesicle docking involved in exocytosis	3.33E-02
192	GO:0016126: sterol biosynthetic process	3.62E-02
193	GO:0001666: response to hypoxia	3.62E-02
194	GO:0042128: nitrate assimilation	3.91E-02
195	GO:0006906: vesicle fusion	3.91E-02
196	GO:0071555: cell wall organization	4.10E-02
197	GO:0016049: cell growth	4.21E-02
198	GO:0030244: cellulose biosynthetic process	4.37E-02
199	GO:0010311: lateral root formation	4.52E-02
200	GO:0055114: oxidation-reduction process	4.66E-02
201	GO:0010043: response to zinc ion	4.84E-02
202	GO:0010119: regulation of stomatal movement	4.84E-02
203	GO:0009631: cold acclimation	4.84E-02
204	GO:0006865: amino acid transport	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0047598: 7-dehydrocholesterol reductase activity	0.00E+00
2	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
3	GO:0016603: glutaminyl-peptide cyclotransferase activity	0.00E+00
4	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
5	GO:0033759: flavone synthase activity	0.00E+00
6	GO:0015370: solute:sodium symporter activity	0.00E+00
7	GO:0003837: beta-ureidopropionase activity	0.00E+00
8	GO:0009918: sterol delta7 reductase activity	0.00E+00
9	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
10	GO:0005212: structural constituent of eye lens	0.00E+00
11	GO:0004012: phospholipid-translocating ATPase activity	2.71E-06
12	GO:0016301: kinase activity	1.37E-05
13	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	4.67E-05
14	GO:0004190: aspartic-type endopeptidase activity	6.79E-05
15	GO:0005524: ATP binding	9.25E-05
16	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.92E-04
17	GO:0043295: glutathione binding	2.16E-04
18	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.73E-04
19	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.80E-04
20	GO:0031127: alpha-(1,2)-fucosyltransferase activity	2.80E-04
21	GO:2001227: quercitrin binding	2.80E-04
22	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.80E-04
23	GO:0015085: calcium ion transmembrane transporter activity	2.80E-04
24	GO:2001147: camalexin binding	2.80E-04
25	GO:0004630: phospholipase D activity	3.35E-04
26	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	3.35E-04
27	GO:0004566: beta-glucuronidase activity	6.14E-04
28	GO:0047364: desulfoglucosinolate sulfotransferase activity	6.14E-04
29	GO:0005388: calcium-transporting ATPase activity	8.37E-04
30	GO:0016595: glutamate binding	9.96E-04
31	GO:0004049: anthranilate synthase activity	9.96E-04
32	GO:0005509: calcium ion binding	1.07E-03
33	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.15E-03
34	GO:0004364: glutathione transferase activity	1.35E-03
35	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	1.42E-03
36	GO:0015086: cadmium ion transmembrane transporter activity	1.42E-03
37	GO:0016656: monodehydroascorbate reductase (NADH) activity	1.42E-03
38	GO:0033612: receptor serine/threonine kinase binding	1.56E-03
39	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.79E-03
40	GO:0015204: urea transmembrane transporter activity	1.91E-03
41	GO:0019825: oxygen binding	2.11E-03
42	GO:0016298: lipase activity	2.16E-03
43	GO:0005516: calmodulin binding	2.35E-03
44	GO:0004356: glutamate-ammonia ligase activity	2.43E-03
45	GO:0045431: flavonol synthase activity	2.43E-03
46	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	2.43E-03
47	GO:0004674: protein serine/threonine kinase activity	2.62E-03
48	GO:0035252: UDP-xylosyltransferase activity	3.00E-03
49	GO:0004747: ribokinase activity	3.62E-03
50	GO:0005506: iron ion binding	4.10E-03
51	GO:0004620: phospholipase activity	4.26E-03
52	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	4.26E-03
53	GO:0008235: metalloexopeptidase activity	4.26E-03
54	GO:0008320: protein transmembrane transporter activity	4.26E-03
55	GO:0008865: fructokinase activity	4.95E-03
56	GO:0004708: MAP kinase kinase activity	4.95E-03
57	GO:0004034: aldose 1-epimerase activity	4.95E-03
58	GO:0004806: triglyceride lipase activity	5.33E-03
59	GO:0003843: 1,3-beta-D-glucan synthase activity	5.67E-03
60	GO:0008417: fucosyltransferase activity	6.43E-03
61	GO:0043565: sequence-specific DNA binding	7.28E-03
62	GO:0004568: chitinase activity	8.04E-03
63	GO:0008047: enzyme activator activity	8.04E-03
64	GO:0004713: protein tyrosine kinase activity	8.04E-03
65	GO:0004177: aminopeptidase activity	8.90E-03
66	GO:0047372: acylglycerol lipase activity	8.90E-03
67	GO:0004672: protein kinase activity	8.96E-03
68	GO:0005484: SNAP receptor activity	9.67E-03
69	GO:0020037: heme binding	1.03E-02
70	GO:0031072: heat shock protein binding	1.07E-02
71	GO:0005262: calcium channel activity	1.07E-02
72	GO:0015293: symporter activity	1.09E-02
73	GO:0000287: magnesium ion binding	1.11E-02
74	GO:0051119: sugar transmembrane transporter activity	1.26E-02
75	GO:0008061: chitin binding	1.26E-02
76	GO:0003712: transcription cofactor activity	1.26E-02
77	GO:0008146: sulfotransferase activity	1.26E-02
78	GO:0015171: amino acid transmembrane transporter activity	1.45E-02
79	GO:0031625: ubiquitin protein ligase binding	1.45E-02
80	GO:0003954: NADH dehydrogenase activity	1.47E-02
81	GO:0045735: nutrient reservoir activity	1.55E-02
82	GO:0005515: protein binding	1.73E-02
83	GO:0051082: unfolded protein binding	1.86E-02
84	GO:0016760: cellulose synthase (UDP-forming) activity	1.91E-02
85	GO:0008810: cellulase activity	1.91E-02
86	GO:0016746: transferase activity, transferring acyl groups	1.92E-02
87	GO:0003727: single-stranded RNA binding	2.03E-02
88	GO:0047134: protein-disulfide reductase activity	2.15E-02
89	GO:0030246: carbohydrate binding	2.26E-02
90	GO:0005451: monovalent cation:proton antiporter activity	2.27E-02
91	GO:0005507: copper ion binding	2.45E-02
92	GO:0004791: thioredoxin-disulfide reductase activity	2.52E-02
93	GO:0016853: isomerase activity	2.52E-02
94	GO:0005355: glucose transmembrane transporter activity	2.52E-02
95	GO:0015299: solute:proton antiporter activity	2.52E-02
96	GO:0015385: sodium:proton antiporter activity	3.05E-02
97	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.05E-02
98	GO:0016759: cellulose synthase activity	3.19E-02
99	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.33E-02
100	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.91E-02
101	GO:0030247: polysaccharide binding	4.06E-02
102	GO:0004683: calmodulin-dependent protein kinase activity	4.06E-02
103	GO:0003824: catalytic activity	4.68E-02
104	GO:0004222: metalloendopeptidase activity	4.68E-02
105	GO:0030145: manganese ion binding	4.84E-02
106	GO:0050897: cobalt ion binding	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.69E-14
2	GO:0016021: integral component of membrane	3.41E-11
3	GO:0005789: endoplasmic reticulum membrane	2.67E-06
4	GO:0005618: cell wall	4.88E-05
5	GO:0045252: oxoglutarate dehydrogenase complex	2.80E-04
6	GO:0009506: plasmodesma	2.99E-04
7	GO:0016020: membrane	6.04E-04
8	GO:0005950: anthranilate synthase complex	6.14E-04
9	GO:0031304: intrinsic component of mitochondrial inner membrane	6.14E-04
10	GO:0005901: caveola	6.14E-04
11	GO:0031902: late endosome membrane	1.28E-03
12	GO:0070062: extracellular exosome	1.42E-03
13	GO:0005775: vacuolar lumen	1.42E-03
14	GO:0030658: transport vesicle membrane	1.42E-03
15	GO:0005794: Golgi apparatus	2.13E-03
16	GO:0005783: endoplasmic reticulum	2.81E-03
17	GO:0009504: cell plate	2.93E-03
18	GO:0032580: Golgi cisterna membrane	3.80E-03
19	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	4.26E-03
20	GO:0000148: 1,3-beta-D-glucan synthase complex	5.67E-03
21	GO:0030665: clathrin-coated vesicle membrane	7.22E-03
22	GO:0000139: Golgi membrane	7.65E-03
23	GO:0017119: Golgi transport complex	8.04E-03
24	GO:0048046: apoplast	8.07E-03
25	GO:0031225: anchored component of membrane	8.62E-03
26	GO:0005765: lysosomal membrane	8.90E-03
27	GO:0046658: anchored component of plasma membrane	9.29E-03
28	GO:0005887: integral component of plasma membrane	9.66E-03
29	GO:0031012: extracellular matrix	1.07E-02
30	GO:0005829: cytosol	1.18E-02
31	GO:0030176: integral component of endoplasmic reticulum membrane	1.26E-02
32	GO:0009505: plant-type cell wall	1.99E-02
33	GO:0000145: exocyst	2.91E-02
34	GO:0005802: trans-Golgi network	2.92E-02
35	GO:0071944: cell periphery	3.05E-02
36	GO:0005788: endoplasmic reticulum lumen	3.76E-02
37	GO:0000151: ubiquitin ligase complex	4.37E-02
38	GO:0005773: vacuole	4.39E-02
39	GO:0005774: vacuolar membrane	4.50E-02