co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G01890

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
2	GO:0000372: Group I intron splicing	0.00E+00
3	GO:1900000: regulation of anthocyanin catabolic process	0.00E+00
4	GO:0002184: cytoplasmic translational termination	0.00E+00
5	GO:0006780: uroporphyrinogen III biosynthetic process	0.00E+00
6	GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation	0.00E+00
7	GO:0000476: maturation of 4.5S rRNA	5.18E-05
8	GO:0000967: rRNA 5'-end processing	5.18E-05
9	GO:0043266: regulation of potassium ion transport	5.18E-05
10	GO:2000021: regulation of ion homeostasis	5.18E-05
11	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	5.18E-05
12	GO:0034470: ncRNA processing	1.27E-04
13	GO:0006695: cholesterol biosynthetic process	1.27E-04
14	GO:0043617: cellular response to sucrose starvation	2.17E-04
15	GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement	2.17E-04
16	GO:0009741: response to brassinosteroid	2.71E-04
17	GO:0006424: glutamyl-tRNA aminoacylation	3.17E-04
18	GO:0034059: response to anoxia	3.17E-04
19	GO:0032543: mitochondrial translation	5.39E-04
20	GO:0015995: chlorophyll biosynthetic process	5.66E-04
21	GO:0016554: cytidine to uridine editing	6.60E-04
22	GO:0000741: karyogamy	6.60E-04
23	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	6.60E-04
24	GO:0006751: glutathione catabolic process	6.60E-04
25	GO:0051510: regulation of unidimensional cell growth	9.18E-04
26	GO:0009690: cytokinin metabolic process	1.06E-03
27	GO:0032544: plastid translation	1.20E-03
28	GO:0045337: farnesyl diphosphate biosynthetic process	1.35E-03
29	GO:0033384: geranyl diphosphate biosynthetic process	1.35E-03
30	GO:0000373: Group II intron splicing	1.35E-03
31	GO:0046685: response to arsenic-containing substance	1.35E-03
32	GO:1900865: chloroplast RNA modification	1.50E-03
33	GO:0006779: porphyrin-containing compound biosynthetic process	1.50E-03
34	GO:0006782: protoporphyrinogen IX biosynthetic process	1.67E-03
35	GO:0018119: peptidyl-cysteine S-nitrosylation	1.84E-03
36	GO:0009742: brassinosteroid mediated signaling pathway	1.97E-03
37	GO:0012501: programmed cell death	2.01E-03
38	GO:0006418: tRNA aminoacylation for protein translation	3.16E-03
39	GO:0042631: cellular response to water deprivation	4.49E-03
40	GO:0010197: polar nucleus fusion	4.72E-03
41	GO:0009826: unidimensional cell growth	4.72E-03
42	GO:0009646: response to absence of light	4.96E-03
43	GO:0009791: post-embryonic development	5.21E-03
44	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	5.46E-03
45	GO:0002229: defense response to oomycetes	5.46E-03
46	GO:0030163: protein catabolic process	5.97E-03
47	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	6.28E-03
48	GO:0045454: cell redox homeostasis	7.27E-03
49	GO:0009817: defense response to fungus, incompatible interaction	8.46E-03
50	GO:0048481: plant ovule development	8.46E-03
51	GO:0030001: metal ion transport	1.09E-02
52	GO:0009640: photomorphogenesis	1.19E-02
53	GO:0009744: response to sucrose	1.19E-02
54	GO:0042538: hyperosmotic salinity response	1.40E-02
55	GO:0051603: proteolysis involved in cellular protein catabolic process	1.51E-02
56	GO:0007165: signal transduction	1.65E-02
57	GO:0048316: seed development	1.70E-02
58	GO:0009740: gibberellic acid mediated signaling pathway	1.81E-02
59	GO:0042545: cell wall modification	1.85E-02
60	GO:0009790: embryo development	2.48E-02
61	GO:0006508: proteolysis	2.68E-02
62	GO:0040008: regulation of growth	2.70E-02
63	GO:0006468: protein phosphorylation	2.70E-02
64	GO:0045490: pectin catabolic process	2.79E-02
65	GO:0009451: RNA modification	2.84E-02
66	GO:0007166: cell surface receptor signaling pathway	3.07E-02
67	GO:0042742: defense response to bacterium	3.24E-02
68	GO:0009658: chloroplast organization	3.81E-02
69	GO:0042254: ribosome biogenesis	3.86E-02
70	GO:0046777: protein autophosphorylation	4.66E-02
71	GO:0005975: carbohydrate metabolic process	4.88E-02
72	GO:0015979: photosynthesis	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
2	GO:0004852: uroporphyrinogen-III synthase activity	0.00E+00
3	GO:0080062: cytokinin 9-beta-glucosyltransferase activity	5.18E-05
4	GO:0047807: cytokinin 7-beta-glucosyltransferase activity	5.18E-05
5	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	5.18E-05
6	GO:0003839: gamma-glutamylcyclotransferase activity	1.27E-04
7	GO:0002161: aminoacyl-tRNA editing activity	2.17E-04
8	GO:0004148: dihydrolipoyl dehydrogenase activity	2.17E-04
9	GO:0030267: glyoxylate reductase (NADP) activity	2.17E-04
10	GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity	2.17E-04
11	GO:0016851: magnesium chelatase activity	3.17E-04
12	GO:0043023: ribosomal large subunit binding	3.17E-04
13	GO:0001872: (1->3)-beta-D-glucan binding	3.17E-04
14	GO:0042578: phosphoric ester hydrolase activity	6.60E-04
15	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	7.87E-04
16	GO:0051920: peroxiredoxin activity	7.87E-04
17	GO:0016209: antioxidant activity	1.06E-03
18	GO:0004337: geranyltranstransferase activity	1.35E-03
19	GO:0004161: dimethylallyltranstransferase activity	1.84E-03
20	GO:0000049: tRNA binding	2.01E-03
21	GO:0004565: beta-galactosidase activity	2.19E-03
22	GO:0004190: aspartic-type endopeptidase activity	2.56E-03
23	GO:0004812: aminoacyl-tRNA ligase activity	4.26E-03
24	GO:0004518: nuclease activity	5.71E-03
25	GO:0030247: polysaccharide binding	7.88E-03
26	GO:0005096: GTPase activator activity	8.76E-03
27	GO:0004519: endonuclease activity	9.76E-03
28	GO:0004672: protein kinase activity	1.06E-02
29	GO:0004185: serine-type carboxypeptidase activity	1.19E-02
30	GO:0035091: phosphatidylinositol binding	1.26E-02
31	GO:0016298: lipase activity	1.51E-02
32	GO:0045330: aspartyl esterase activity	1.58E-02
33	GO:0016787: hydrolase activity	1.71E-02
34	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.77E-02
35	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.77E-02
36	GO:0030599: pectinesterase activity	1.81E-02
37	GO:0019843: rRNA binding	2.22E-02
38	GO:0004252: serine-type endopeptidase activity	2.39E-02
39	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.66E-02
40	GO:0003723: RNA binding	2.73E-02
41	GO:0008194: UDP-glycosyltransferase activity	3.03E-02
42	GO:0004601: peroxidase activity	3.81E-02
43	GO:0016788: hydrolase activity, acting on ester bonds	3.86E-02
44	GO:0050660: flavin adenine dinucleotide binding	4.23E-02
45	GO:0008233: peptidase activity	4.39E-02
46	GO:0005524: ATP binding	4.40E-02
47	GO:0052689: carboxylic ester hydrolase activity	4.77E-02
48	GO:0004674: protein serine/threonine kinase activity	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0009570: chloroplast stroma	1.85E-06
2	GO:0009507: chloroplast	6.82E-06
3	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	5.18E-05
4	GO:0010007: magnesium chelatase complex	2.17E-04
5	GO:0000311: plastid large ribosomal subunit	2.01E-03
6	GO:0009532: plastid stroma	3.37E-03
7	GO:0030529: intracellular ribonucleoprotein complex	7.04E-03
8	GO:0009536: plastid	8.40E-03
9	GO:0009505: plant-type cell wall	8.64E-03
10	GO:0043231: intracellular membrane-bounded organelle	9.89E-03
11	GO:0005576: extracellular region	1.73E-02
12	GO:0009579: thylakoid	1.91E-02
13	GO:0005759: mitochondrial matrix	2.61E-02
14	GO:0009705: plant-type vacuole membrane	2.79E-02
15	GO:0046658: anchored component of plasma membrane	3.41E-02
16	GO:0009941: chloroplast envelope	4.53E-02
17	GO:0005739: mitochondrion	4.73E-02