Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G01190

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1900490: positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity0.00E+00
2GO:0000244: spliceosomal tri-snRNP complex assembly0.00E+00
3GO:1903798: regulation of production of miRNAs involved in gene silencing by miRNA0.00E+00
4GO:0008361: regulation of cell size2.46E-05
5GO:0071902: positive regulation of protein serine/threonine kinase activity2.64E-05
6GO:0090421: embryonic meristem initiation2.64E-05
7GO:1903648: positive regulation of chlorophyll catabolic process2.64E-05
8GO:0080136: priming of cellular response to stress2.64E-05
9GO:1900036: positive regulation of cellular response to heat2.64E-05
10GO:0043631: RNA polyadenylation6.72E-05
11GO:0010506: regulation of autophagy1.18E-04
12GO:0071230: cellular response to amino acid stimulus1.18E-04
13GO:0031929: TOR signaling1.18E-04
14GO:0043044: ATP-dependent chromatin remodeling1.18E-04
15GO:2000034: regulation of seed maturation1.18E-04
16GO:0080119: ER body organization1.76E-04
17GO:2000114: regulation of establishment of cell polarity1.76E-04
18GO:0072583: clathrin-dependent endocytosis1.76E-04
19GO:2000038: regulation of stomatal complex development2.39E-04
20GO:0010188: response to microbial phytotoxin2.39E-04
21GO:0006346: methylation-dependent chromatin silencing2.39E-04
22GO:0016049: cell growth2.55E-04
23GO:0009697: salicylic acid biosynthetic process3.07E-04
24GO:0016558: protein import into peroxisome matrix3.07E-04
25GO:0007029: endoplasmic reticulum organization3.07E-04
26GO:0000380: alternative mRNA splicing, via spliceosome3.07E-04
27GO:0032876: negative regulation of DNA endoreduplication3.07E-04
28GO:0042742: defense response to bacterium3.27E-04
29GO:0048232: male gamete generation3.78E-04
30GO:0009267: cellular response to starvation3.78E-04
31GO:0010199: organ boundary specification between lateral organs and the meristem4.53E-04
32GO:2000037: regulation of stomatal complex patterning4.53E-04
33GO:0010310: regulation of hydrogen peroxide metabolic process4.53E-04
34GO:1900057: positive regulation of leaf senescence5.30E-04
35GO:0000122: negative regulation of transcription from RNA polymerase II promoter5.30E-04
36GO:0006333: chromatin assembly or disassembly5.30E-04
37GO:0030307: positive regulation of cell growth5.30E-04
38GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway5.30E-04
39GO:0010050: vegetative phase change5.30E-04
40GO:0040029: regulation of gene expression, epigenetic6.10E-04
41GO:0009642: response to light intensity6.10E-04
42GO:0048766: root hair initiation6.10E-04
43GO:0010120: camalexin biosynthetic process6.94E-04
44GO:0010204: defense response signaling pathway, resistance gene-independent6.94E-04
45GO:0009880: embryonic pattern specification6.94E-04
46GO:0001708: cell fate specification7.80E-04
47GO:0010345: suberin biosynthetic process7.80E-04
48GO:0000398: mRNA splicing, via spliceosome9.39E-04
49GO:0009870: defense response signaling pathway, resistance gene-dependent9.59E-04
50GO:0043069: negative regulation of programmed cell death9.59E-04
51GO:0009737: response to abscisic acid1.03E-03
52GO:0006378: mRNA polyadenylation1.05E-03
53GO:0000266: mitochondrial fission1.15E-03
54GO:0010229: inflorescence development1.25E-03
55GO:0010143: cutin biosynthetic process1.35E-03
56GO:0010030: positive regulation of seed germination1.45E-03
57GO:0010053: root epidermal cell differentiation1.45E-03
58GO:0007030: Golgi organization1.45E-03
59GO:0010025: wax biosynthetic process1.56E-03
60GO:0042023: DNA endoreduplication1.56E-03
61GO:0008380: RNA splicing1.63E-03
62GO:0008299: isoprenoid biosynthetic process1.78E-03
63GO:0006366: transcription from RNA polymerase II promoter1.90E-03
64GO:0030433: ubiquitin-dependent ERAD pathway2.02E-03
65GO:0009414: response to water deprivation2.10E-03
66GO:0010091: trichome branching2.26E-03
67GO:0070417: cellular response to cold2.39E-03
68GO:0042335: cuticle development2.52E-03
69GO:0010183: pollen tube guidance2.91E-03
70GO:0000302: response to reactive oxygen species3.05E-03
71GO:0006635: fatty acid beta-oxidation3.05E-03
72GO:0019760: glucosinolate metabolic process3.47E-03
73GO:0006397: mRNA processing3.98E-03
74GO:0006888: ER to Golgi vesicle-mediated transport4.37E-03
75GO:0048481: plant ovule development4.69E-03
76GO:0045087: innate immune response5.52E-03
77GO:0042542: response to hydrogen peroxide6.39E-03
78GO:0009738: abscisic acid-activated signaling pathway6.52E-03
79GO:0031347: regulation of defense response7.50E-03
80GO:0010224: response to UV-B8.28E-03
81GO:0009626: plant-type hypersensitive response9.50E-03
82GO:0009620: response to fungus9.71E-03
83GO:0016569: covalent chromatin modification9.92E-03
84GO:0009651: response to salt stress1.00E-02
85GO:0009845: seed germination1.28E-02
86GO:0030154: cell differentiation1.49E-02
87GO:0010150: leaf senescence1.52E-02
88GO:0006355: regulation of transcription, DNA-templated1.59E-02
89GO:0006470: protein dephosphorylation1.67E-02
90GO:0010468: regulation of gene expression1.73E-02
91GO:0009409: response to cold1.86E-02
92GO:0006970: response to osmotic stress2.19E-02
93GO:0007049: cell cycle2.24E-02
94GO:0009723: response to ethylene2.30E-02
95GO:0045892: negative regulation of transcription, DNA-templated2.78E-02
96GO:0006886: intracellular protein transport2.81E-02
97GO:0009793: embryo development ending in seed dormancy3.17E-02
98GO:0006281: DNA repair3.19E-02
99GO:0048364: root development3.29E-02
100GO:0016310: phosphorylation3.36E-02
101GO:0006357: regulation of transcription from RNA polymerase II promoter3.90E-02
102GO:0016567: protein ubiquitination4.16E-02
103GO:0009908: flower development4.47E-02
104GO:0009735: response to cytokinin4.51E-02
105GO:0009555: pollen development4.80E-02
RankGO TermAdjusted P value
1GO:0005515: protein binding1.05E-06
2GO:0030623: U5 snRNA binding2.64E-05
3GO:0001078: transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding6.72E-05
4GO:0004652: polynucleotide adenylyltransferase activity1.76E-04
5GO:0003682: chromatin binding2.15E-04
6GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway2.39E-04
7GO:0017070: U6 snRNA binding3.07E-04
8GO:0030674: protein binding, bridging6.10E-04
9GO:0016874: ligase activity7.74E-04
10GO:0004386: helicase activity8.91E-04
11GO:0000976: transcription regulatory region sequence-specific DNA binding1.15E-03
12GO:0008094: DNA-dependent ATPase activity1.90E-03
13GO:0004707: MAP kinase activity1.90E-03
14GO:0016779: nucleotidyltransferase activity2.02E-03
15GO:0030276: clathrin binding2.65E-03
16GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.62E-03
17GO:0043565: sequence-specific DNA binding3.88E-03
18GO:0003746: translation elongation factor activity5.52E-03
19GO:0004712: protein serine/threonine/tyrosine kinase activity5.86E-03
20GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.33E-02
21GO:0008270: zinc ion binding1.36E-02
22GO:0044212: transcription regulatory region DNA binding1.37E-02
23GO:0005524: ATP binding1.55E-02
24GO:0008017: microtubule binding1.57E-02
25GO:0003700: transcription factor activity, sequence-specific DNA binding1.82E-02
26GO:0004842: ubiquitin-protein transferase activity1.89E-02
27GO:0004672: protein kinase activity2.01E-02
28GO:0016301: kinase activity2.33E-02
29GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting2.75E-02
30GO:0004722: protein serine/threonine phosphatase activity2.94E-02
31GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding2.97E-02
32GO:0003924: GTPase activity3.19E-02
33GO:0016887: ATPase activity4.36E-02
34GO:0000166: nucleotide binding4.80E-02
RankGO TermAdjusted P value
1GO:0005690: U4atac snRNP0.00E+00
2GO:0045334: clathrin-coated endocytic vesicle2.64E-05
3GO:0031931: TORC1 complex1.18E-04
4GO:0005634: nucleus2.26E-04
5GO:0005687: U4 snRNP3.07E-04
6GO:0097526: spliceosomal tri-snRNP complex3.07E-04
7GO:0030127: COPII vesicle coat3.78E-04
8GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane5.30E-04
9GO:0005681: spliceosomal complex6.87E-04
10GO:0046540: U4/U6 x U5 tri-snRNP complex6.94E-04
11GO:0071011: precatalytic spliceosome8.68E-04
12GO:0015030: Cajal body8.68E-04
13GO:0009574: preprophase band1.25E-03
14GO:0030176: integral component of endoplasmic reticulum membrane1.45E-03
15GO:0080008: Cul4-RING E3 ubiquitin ligase complex2.30E-03
16GO:0009504: cell plate2.91E-03
17GO:0005778: peroxisomal membrane3.62E-03
18GO:0005834: heterotrimeric G-protein complex9.50E-03
19GO:0009706: chloroplast inner membrane1.03E-02
20GO:0005623: cell1.23E-02
21GO:0009524: phragmoplast1.26E-02
22GO:0005773: vacuole1.80E-02
23GO:0005874: microtubule2.36E-02
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Gene type



Gene DE type