Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G01140

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006182: cGMP biosynthetic process0.00E+00
2GO:0046109: uridine biosynthetic process0.00E+00
3GO:0006102: isocitrate metabolic process4.35E-05
4GO:1990641: response to iron ion starvation8.43E-05
5GO:0010726: positive regulation of hydrogen peroxide metabolic process8.43E-05
6GO:0010421: hydrogen peroxide-mediated programmed cell death8.43E-05
7GO:0006007: glucose catabolic process8.43E-05
8GO:0006099: tricarboxylic acid cycle1.23E-04
9GO:0044419: interspecies interaction between organisms2.00E-04
10GO:0006101: citrate metabolic process2.00E-04
11GO:0010118: stomatal movement4.74E-04
12GO:0009052: pentose-phosphate shunt, non-oxidative branch4.84E-04
13GO:0006979: response to oxidative stress7.23E-04
14GO:0006097: glyoxylate cycle8.14E-04
15GO:0007029: endoplasmic reticulum organization8.14E-04
16GO:0010225: response to UV-C8.14E-04
17GO:0034052: positive regulation of plant-type hypersensitive response8.14E-04
18GO:0000304: response to singlet oxygen8.14E-04
19GO:0006468: protein phosphorylation8.42E-04
20GO:0009617: response to bacterium9.85E-04
21GO:0006561: proline biosynthetic process9.94E-04
22GO:0010942: positive regulation of cell death9.94E-04
23GO:0006121: mitochondrial electron transport, succinate to ubiquinone9.94E-04
24GO:0010256: endomembrane system organization9.94E-04
25GO:0043248: proteasome assembly9.94E-04
26GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response1.18E-03
27GO:0009094: L-phenylalanine biosynthetic process1.18E-03
28GO:0006744: ubiquinone biosynthetic process1.39E-03
29GO:1900056: negative regulation of leaf senescence1.39E-03
30GO:0019745: pentacyclic triterpenoid biosynthetic process1.39E-03
31GO:0042773: ATP synthesis coupled electron transport1.39E-03
32GO:0009061: anaerobic respiration1.60E-03
33GO:0017004: cytochrome complex assembly1.83E-03
34GO:0015996: chlorophyll catabolic process1.83E-03
35GO:0009657: plastid organization1.83E-03
36GO:0010120: camalexin biosynthetic process1.83E-03
37GO:0010112: regulation of systemic acquired resistance2.06E-03
38GO:0006855: drug transmembrane transport2.14E-03
39GO:0030042: actin filament depolymerization2.30E-03
40GO:0012501: programmed cell death3.09E-03
41GO:0009718: anthocyanin-containing compound biosynthetic process3.37E-03
42GO:0009266: response to temperature stimulus3.66E-03
43GO:0009969: xyloglucan biosynthetic process3.95E-03
44GO:0042343: indole glucosinolate metabolic process3.95E-03
45GO:0005992: trehalose biosynthetic process4.57E-03
46GO:0006406: mRNA export from nucleus4.57E-03
47GO:0098542: defense response to other organism5.22E-03
48GO:0071456: cellular response to hypoxia5.55E-03
49GO:0010227: floral organ abscission5.89E-03
50GO:0019722: calcium-mediated signaling6.24E-03
51GO:0046686: response to cadmium ion6.45E-03
52GO:0016117: carotenoid biosynthetic process6.60E-03
53GO:0008033: tRNA processing6.97E-03
54GO:0048544: recognition of pollen7.72E-03
55GO:0002229: defense response to oomycetes8.50E-03
56GO:0010193: response to ozone8.50E-03
57GO:0000302: response to reactive oxygen species8.50E-03
58GO:0055114: oxidation-reduction process8.71E-03
59GO:0009615: response to virus1.10E-02
60GO:0080167: response to karrikin1.16E-02
61GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.20E-02
62GO:0030244: cellulose biosynthetic process1.33E-02
63GO:0009832: plant-type cell wall biogenesis1.37E-02
64GO:0006499: N-terminal protein myristoylation1.42E-02
65GO:0009407: toxin catabolic process1.42E-02
66GO:0000724: double-strand break repair via homologous recombination1.52E-02
67GO:0009853: photorespiration1.57E-02
68GO:0032259: methylation1.64E-02
69GO:0006839: mitochondrial transport1.72E-02
70GO:0042542: response to hydrogen peroxide1.83E-02
71GO:0009644: response to high light intensity1.99E-02
72GO:0009636: response to toxic substance2.04E-02
73GO:0042538: hyperosmotic salinity response2.21E-02
74GO:0009809: lignin biosynthetic process2.32E-02
75GO:0006486: protein glycosylation2.32E-02
76GO:0010224: response to UV-B2.38E-02
77GO:0006810: transport2.39E-02
78GO:0006096: glycolytic process2.62E-02
79GO:0009626: plant-type hypersensitive response2.74E-02
80GO:0009620: response to fungus2.80E-02
81GO:0009738: abscisic acid-activated signaling pathway2.94E-02
82GO:0009624: response to nematode2.98E-02
83GO:0009555: pollen development3.04E-02
84GO:0009845: seed germination3.70E-02
85GO:0009737: response to abscisic acid3.79E-02
86GO:0010150: leaf senescence4.40E-02
87GO:0007166: cell surface receptor signaling pathway4.84E-02
RankGO TermAdjusted P value
1GO:0010181: FMN binding2.40E-05
2GO:0005524: ATP binding4.91E-05
3GO:0004674: protein serine/threonine kinase activity5.90E-05
4GO:0031127: alpha-(1,2)-fucosyltransferase activity8.43E-05
5GO:0004733: pyridoxamine-phosphate oxidase activity8.43E-05
6GO:0051539: 4 iron, 4 sulfur cluster binding1.39E-04
7GO:0003994: aconitate hydratase activity2.00E-04
8GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity2.00E-04
9GO:0043141: ATP-dependent 5'-3' DNA helicase activity2.00E-04
10GO:0015036: disulfide oxidoreductase activity2.00E-04
11GO:0008517: folic acid transporter activity2.00E-04
12GO:0004751: ribose-5-phosphate isomerase activity3.35E-04
13GO:0004383: guanylate cyclase activity3.35E-04
14GO:0004449: isocitrate dehydrogenase (NAD+) activity4.84E-04
15GO:0042299: lupeol synthase activity4.84E-04
16GO:0009055: electron carrier activity5.32E-04
17GO:0047769: arogenate dehydratase activity6.44E-04
18GO:0004664: prephenate dehydratase activity6.44E-04
19GO:0016866: intramolecular transferase activity6.44E-04
20GO:0009916: alternative oxidase activity6.44E-04
21GO:0000104: succinate dehydrogenase activity8.14E-04
22GO:0008177: succinate dehydrogenase (ubiquinone) activity8.14E-04
23GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.32E-03
24GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity1.39E-03
25GO:0050660: flavin adenine dinucleotide binding1.63E-03
26GO:0008417: fucosyltransferase activity2.06E-03
27GO:0003678: DNA helicase activity2.06E-03
28GO:0045309: protein phosphorylated amino acid binding2.30E-03
29GO:0008171: O-methyltransferase activity2.56E-03
30GO:0008559: xenobiotic-transporting ATPase activity2.82E-03
31GO:0019904: protein domain specific binding2.82E-03
32GO:0015114: phosphate ion transmembrane transporter activity3.37E-03
33GO:0051536: iron-sulfur cluster binding4.57E-03
34GO:0003954: NADH dehydrogenase activity4.57E-03
35GO:0043424: protein histidine kinase binding4.89E-03
36GO:0016491: oxidoreductase activity5.00E-03
37GO:0016853: isomerase activity7.72E-03
38GO:0008137: NADH dehydrogenase (ubiquinone) activity8.50E-03
39GO:0030246: carbohydrate binding8.75E-03
40GO:0004197: cysteine-type endopeptidase activity8.90E-03
41GO:0016597: amino acid binding1.06E-02
42GO:0030247: polysaccharide binding1.23E-02
43GO:0008757: S-adenosylmethionine-dependent methyltransferase activity1.28E-02
44GO:0015238: drug transmembrane transporter activity1.37E-02
45GO:0016301: kinase activity1.42E-02
46GO:0004222: metalloendopeptidase activity1.42E-02
47GO:0030145: manganese ion binding1.47E-02
48GO:0050897: cobalt ion binding1.47E-02
49GO:0005215: transporter activity1.67E-02
50GO:0003924: GTPase activity1.71E-02
51GO:0004364: glutathione transferase activity1.83E-02
52GO:0051537: 2 iron, 2 sulfur cluster binding1.99E-02
53GO:0016757: transferase activity, transferring glycosyl groups2.09E-02
54GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.10E-02
55GO:0003779: actin binding2.92E-02
56GO:0016829: lyase activity3.70E-02
57GO:0016740: transferase activity3.70E-02
58GO:0015297: antiporter activity4.26E-02
59GO:0008194: UDP-glycosyltransferase activity4.77E-02
60GO:0005525: GTP binding4.96E-02
RankGO TermAdjusted P value
1GO:0046862: chromoplast membrane0.00E+00
2GO:0031314: extrinsic component of mitochondrial inner membrane2.00E-04
3GO:0005746: mitochondrial respiratory chain8.14E-04
4GO:0045273: respiratory chain complex II1.60E-03
5GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)1.60E-03
6GO:0016021: integral component of membrane1.99E-03
7GO:0031966: mitochondrial membrane2.30E-03
8GO:0005743: mitochondrial inner membrane2.65E-03
9GO:0008541: proteasome regulatory particle, lid subcomplex2.82E-03
10GO:0090404: pollen tube tip2.82E-03
11GO:0005750: mitochondrial respiratory chain complex III3.66E-03
12GO:0005886: plasma membrane4.84E-03
13GO:0045271: respiratory chain complex I4.89E-03
14GO:0070469: respiratory chain4.89E-03
15GO:0015629: actin cytoskeleton5.89E-03
16GO:0005794: Golgi apparatus6.16E-03
17GO:0032580: Golgi cisterna membrane9.72E-03
18GO:0000325: plant-type vacuole1.47E-02
19GO:0009536: plastid1.91E-02
20GO:0000502: proteasome complex2.32E-02
21GO:0005635: nuclear envelope2.44E-02
22GO:0005747: mitochondrial respiratory chain complex I2.68E-02
23GO:0005739: mitochondrion3.16E-02
24GO:0005777: peroxisome3.48E-02
25GO:0009705: plant-type vacuole membrane4.40E-02
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Gene type



Gene DE type