co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G80640

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0060416: response to growth hormone	0.00E+00
2	GO:0006429: leucyl-tRNA aminoacylation	0.00E+00
3	GO:0002184: cytoplasmic translational termination	0.00E+00
4	GO:0006642: triglyceride mobilization	0.00E+00
5	GO:0032544: plastid translation	5.54E-05
6	GO:0046166: glyceraldehyde-3-phosphate biosynthetic process	8.43E-05
7	GO:1903409: reactive oxygen species biosynthetic process	8.43E-05
8	GO:0006430: lysyl-tRNA aminoacylation	8.43E-05
9	GO:0010020: chloroplast fission	1.80E-04
10	GO:0045717: negative regulation of fatty acid biosynthetic process	2.00E-04
11	GO:0080148: negative regulation of response to water deprivation	2.00E-04
12	GO:0006418: tRNA aminoacylation for protein translation	2.83E-04
13	GO:0016998: cell wall macromolecule catabolic process	3.11E-04
14	GO:0006954: inflammatory response	3.35E-04
15	GO:0019563: glycerol catabolic process	3.35E-04
16	GO:0032504: multicellular organism reproduction	3.35E-04
17	GO:0016556: mRNA modification	4.84E-04
18	GO:0010371: regulation of gibberellin biosynthetic process	4.84E-04
19	GO:0010239: chloroplast mRNA processing	4.84E-04
20	GO:0006749: glutathione metabolic process	6.44E-04
21	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	6.44E-04
22	GO:0006808: regulation of nitrogen utilization	6.44E-04
23	GO:0045487: gibberellin catabolic process	8.14E-04
24	GO:0000304: response to singlet oxygen	8.14E-04
25	GO:0032543: mitochondrial translation	8.14E-04
26	GO:0018258: protein O-linked glycosylation via hydroxyproline	9.94E-04
27	GO:0006655: phosphatidylglycerol biosynthetic process	9.94E-04
28	GO:0010405: arabinogalactan protein metabolic process	9.94E-04
29	GO:0016554: cytidine to uridine editing	9.94E-04
30	GO:0042026: protein refolding	1.18E-03
31	GO:1901259: chloroplast rRNA processing	1.18E-03
32	GO:0006458: 'de novo' protein folding	1.18E-03
33	GO:0006955: immune response	1.39E-03
34	GO:0009395: phospholipid catabolic process	1.39E-03
35	GO:0006353: DNA-templated transcription, termination	1.60E-03
36	GO:0009690: cytokinin metabolic process	1.60E-03
37	GO:0009704: de-etiolation	1.60E-03
38	GO:0009657: plastid organization	1.83E-03
39	GO:0051707: response to other organism	1.84E-03
40	GO:0010206: photosystem II repair	2.06E-03
41	GO:0048589: developmental growth	2.06E-03
42	GO:1900865: chloroplast RNA modification	2.30E-03
43	GO:0006415: translational termination	2.82E-03
44	GO:0018119: peptidyl-cysteine S-nitrosylation	2.82E-03
45	GO:0006096: glycolytic process	2.91E-03
46	GO:0016024: CDP-diacylglycerol biosynthetic process	3.09E-03
47	GO:0006094: gluconeogenesis	3.37E-03
48	GO:0042545: cell wall modification	3.39E-03
49	GO:0019253: reductive pentose-phosphate cycle	3.66E-03
50	GO:0048768: root hair cell tip growth	3.66E-03
51	GO:0071732: cellular response to nitric oxide	3.95E-03
52	GO:0007010: cytoskeleton organization	4.57E-03
53	GO:0031408: oxylipin biosynthetic process	5.22E-03
54	GO:0061077: chaperone-mediated protein folding	5.22E-03
55	GO:0016226: iron-sulfur cluster assembly	5.55E-03
56	GO:0071369: cellular response to ethylene stimulus	5.89E-03
57	GO:0045490: pectin catabolic process	6.01E-03
58	GO:0009306: protein secretion	6.24E-03
59	GO:0016117: carotenoid biosynthetic process	6.60E-03
60	GO:0080022: primary root development	6.97E-03
61	GO:0006814: sodium ion transport	7.72E-03
62	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	8.50E-03
63	GO:0071554: cell wall organization or biogenesis	8.50E-03
64	GO:0032502: developmental process	8.90E-03
65	GO:0007264: small GTPase mediated signal transduction	8.90E-03
66	GO:0071281: cellular response to iron ion	9.30E-03
67	GO:0009658: chloroplast organization	9.31E-03
68	GO:0042254: ribosome biogenesis	9.48E-03
69	GO:0016125: sterol metabolic process	9.72E-03
70	GO:0010027: thylakoid membrane organization	1.10E-02
71	GO:0016126: sterol biosynthetic process	1.10E-02
72	GO:0009793: embryo development ending in seed dormancy	1.17E-02
73	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.20E-02
74	GO:0015995: chlorophyll biosynthetic process	1.23E-02
75	GO:0010411: xyloglucan metabolic process	1.23E-02
76	GO:0006412: translation	1.27E-02
77	GO:0015979: photosynthesis	1.32E-02
78	GO:0048481: plant ovule development	1.33E-02
79	GO:0018298: protein-chromophore linkage	1.33E-02
80	GO:0009817: defense response to fungus, incompatible interaction	1.33E-02
81	GO:0048767: root hair elongation	1.37E-02
82	GO:0009407: toxin catabolic process	1.42E-02
83	GO:0048527: lateral root development	1.47E-02
84	GO:0006508: proteolysis	1.80E-02
85	GO:0042546: cell wall biogenesis	1.93E-02
86	GO:0009636: response to toxic substance	2.04E-02
87	GO:0006813: potassium ion transport	2.32E-02
88	GO:0051603: proteolysis involved in cellular protein catabolic process	2.38E-02
89	GO:0006396: RNA processing	3.05E-02
90	GO:0009742: brassinosteroid mediated signaling pathway	3.11E-02
91	GO:0009790: embryo development	3.91E-02
92	GO:0006633: fatty acid biosynthetic process	4.12E-02
93	GO:0040008: regulation of growth	4.26E-02
94	GO:0007623: circadian rhythm	4.40E-02
95	GO:0016310: phosphorylation	4.50E-02
96	GO:0009739: response to gibberellin	4.77E-02
97	GO:0055114: oxidation-reduction process	4.83E-02
98	GO:0010468: regulation of gene expression	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0004823: leucine-tRNA ligase activity	0.00E+00
2	GO:1990534: thermospermine oxidase activity	0.00E+00
3	GO:0004496: mevalonate kinase activity	0.00E+00
4	GO:0019843: rRNA binding	4.57E-05
5	GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity	8.43E-05
6	GO:0004328: formamidase activity	8.43E-05
7	GO:0004824: lysine-tRNA ligase activity	8.43E-05
8	GO:0004807: triose-phosphate isomerase activity	8.43E-05
9	GO:0001530: lipopolysaccharide binding	8.43E-05
10	GO:0042834: peptidoglycan binding	8.43E-05
11	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	2.00E-04
12	GO:0017150: tRNA dihydrouridine synthase activity	3.35E-04
13	GO:0003913: DNA photolyase activity	3.35E-04
14	GO:0002161: aminoacyl-tRNA editing activity	3.35E-04
15	GO:0004812: aminoacyl-tRNA ligase activity	4.38E-04
16	GO:0016149: translation release factor activity, codon specific	4.84E-04
17	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	4.84E-04
18	GO:0043023: ribosomal large subunit binding	4.84E-04
19	GO:0008097: 5S rRNA binding	4.84E-04
20	GO:0008508: bile acid:sodium symporter activity	4.84E-04
21	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	4.84E-04
22	GO:0016836: hydro-lyase activity	6.44E-04
23	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	9.94E-04
24	GO:1990714: hydroxyproline O-galactosyltransferase activity	9.94E-04
25	GO:0008236: serine-type peptidase activity	1.09E-03
26	GO:0051920: peroxiredoxin activity	1.18E-03
27	GO:0009881: photoreceptor activity	1.39E-03
28	GO:0016209: antioxidant activity	1.60E-03
29	GO:0003747: translation release factor activity	2.06E-03
30	GO:0045330: aspartyl esterase activity	2.73E-03
31	GO:0044183: protein binding involved in protein folding	2.82E-03
32	GO:0030599: pectinesterase activity	3.29E-03
33	GO:0008131: primary amine oxidase activity	3.66E-03
34	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	3.66E-03
35	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.48E-03
36	GO:0051536: iron-sulfur cluster binding	4.57E-03
37	GO:0005528: FK506 binding	4.57E-03
38	GO:0008324: cation transmembrane transporter activity	4.89E-03
39	GO:0004176: ATP-dependent peptidase activity	5.22E-03
40	GO:0003713: transcription coactivator activity	7.34E-03
41	GO:0050662: coenzyme binding	7.72E-03
42	GO:0016762: xyloglucan:xyloglucosyl transferase activity	8.50E-03
43	GO:0003735: structural constituent of ribosome	9.34E-03
44	GO:0008237: metallopeptidase activity	1.01E-02
45	GO:0005200: structural constituent of cytoskeleton	1.01E-02
46	GO:0016413: O-acetyltransferase activity	1.06E-02
47	GO:0004497: monooxygenase activity	1.16E-02
48	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.23E-02
49	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.33E-02
50	GO:0003993: acid phosphatase activity	1.62E-02
51	GO:0004364: glutathione transferase activity	1.83E-02
52	GO:0004519: endonuclease activity	1.86E-02
53	GO:0004185: serine-type carboxypeptidase activity	1.88E-02
54	GO:0043621: protein self-association	1.99E-02
55	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.10E-02
56	GO:0020037: heme binding	2.61E-02
57	GO:0051082: unfolded protein binding	2.98E-02
58	GO:0016758: transferase activity, transferring hexosyl groups	3.44E-02
59	GO:0004252: serine-type endopeptidase activity	3.77E-02
60	GO:0019825: oxygen binding	4.31E-02
61	GO:0005516: calmodulin binding	4.55E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	5.16E-15
2	GO:0009941: chloroplast envelope	8.05E-11
3	GO:0009570: chloroplast stroma	7.63E-10
4	GO:0009579: thylakoid	3.13E-06
5	GO:0009543: chloroplast thylakoid lumen	4.57E-05
6	GO:0031977: thylakoid lumen	1.48E-04
7	GO:0009536: plastid	1.01E-03
8	GO:0009534: chloroplast thylakoid	1.50E-03
9	GO:0005618: cell wall	2.25E-03
10	GO:0000311: plastid large ribosomal subunit	3.09E-03
11	GO:0009706: chloroplast inner membrane	3.50E-03
12	GO:0005840: ribosome	3.54E-03
13	GO:0043234: protein complex	4.26E-03
14	GO:0009505: plant-type cell wall	4.64E-03
15	GO:0005615: extracellular space	6.72E-03
16	GO:0046658: anchored component of plasma membrane	7.96E-03
17	GO:0031969: chloroplast membrane	1.16E-02
18	GO:0015934: large ribosomal subunit	1.47E-02
19	GO:0005856: cytoskeleton	2.04E-02
20	GO:0010287: plastoglobule	3.37E-02
21	GO:0009535: chloroplast thylakoid membrane	4.03E-02
22	GO:0031225: anchored component of membrane	4.71E-02