co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G78870

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
2	GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	0.00E+00
3	GO:0043201: response to leucine	0.00E+00
4	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
5	GO:0080052: response to histidine	0.00E+00
6	GO:0080053: response to phenylalanine	0.00E+00
7	GO:0002376: immune system process	0.00E+00
8	GO:0010360: negative regulation of anion channel activity	0.00E+00
9	GO:0006983: ER overload response	0.00E+00
10	GO:0010150: leaf senescence	4.29E-07
11	GO:0009627: systemic acquired resistance	8.67E-07
12	GO:0043069: negative regulation of programmed cell death	1.09E-05
13	GO:0006979: response to oxidative stress	1.72E-05
14	GO:0006952: defense response	2.50E-05
15	GO:0009697: salicylic acid biosynthetic process	4.82E-05
16	GO:0006014: D-ribose metabolic process	7.11E-05
17	GO:0046686: response to cadmium ion	7.87E-05
18	GO:0042742: defense response to bacterium	9.94E-05
19	GO:0006102: isocitrate metabolic process	1.67E-04
20	GO:0030091: protein repair	1.67E-04
21	GO:0000302: response to reactive oxygen species	1.81E-04
22	GO:0010266: response to vitamin B1	2.02E-04
23	GO:0035266: meristem growth	2.02E-04
24	GO:0007292: female gamete generation	2.02E-04
25	GO:1902361: mitochondrial pyruvate transmembrane transport	2.02E-04
26	GO:0010230: alternative respiration	2.02E-04
27	GO:0046244: salicylic acid catabolic process	2.02E-04
28	GO:0045454: cell redox homeostasis	4.36E-04
29	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	4.52E-04
30	GO:0051788: response to misfolded protein	4.52E-04
31	GO:0031349: positive regulation of defense response	4.52E-04
32	GO:0006101: citrate metabolic process	4.52E-04
33	GO:0043066: negative regulation of apoptotic process	4.52E-04
34	GO:0006850: mitochondrial pyruvate transport	4.52E-04
35	GO:0042939: tripeptide transport	4.52E-04
36	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	4.52E-04
37	GO:0007154: cell communication	4.52E-04
38	GO:0019441: tryptophan catabolic process to kynurenine	4.52E-04
39	GO:0010043: response to zinc ion	5.14E-04
40	GO:0006099: tricarboxylic acid cycle	6.10E-04
41	GO:0090351: seedling development	6.71E-04
42	GO:0060968: regulation of gene silencing	7.36E-04
43	GO:0002230: positive regulation of defense response to virus by host	7.36E-04
44	GO:0000162: tryptophan biosynthetic process	7.47E-04
45	GO:0034976: response to endoplasmic reticulum stress	7.47E-04
46	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.05E-03
47	GO:0007231: osmosensory signaling pathway	1.05E-03
48	GO:0002239: response to oomycetes	1.05E-03
49	GO:0072334: UDP-galactose transmembrane transport	1.05E-03
50	GO:0009399: nitrogen fixation	1.05E-03
51	GO:0033014: tetrapyrrole biosynthetic process	1.05E-03
52	GO:1902290: positive regulation of defense response to oomycetes	1.05E-03
53	GO:0031348: negative regulation of defense response	1.08E-03
54	GO:0051603: proteolysis involved in cellular protein catabolic process	1.20E-03
55	GO:0006542: glutamine biosynthetic process	1.40E-03
56	GO:1902584: positive regulation of response to water deprivation	1.40E-03
57	GO:0033500: carbohydrate homeostasis	1.40E-03
58	GO:0010188: response to microbial phytotoxin	1.40E-03
59	GO:0042938: dipeptide transport	1.40E-03
60	GO:0006662: glycerol ether metabolic process	1.61E-03
61	GO:0006097: glyoxylate cycle	1.78E-03
62	GO:0045927: positive regulation of growth	1.78E-03
63	GO:0000304: response to singlet oxygen	1.78E-03
64	GO:0006564: L-serine biosynthetic process	1.78E-03
65	GO:0005513: detection of calcium ion	1.78E-03
66	GO:0019252: starch biosynthetic process	1.85E-03
67	GO:0009651: response to salt stress	2.17E-03
68	GO:0048827: phyllome development	2.19E-03
69	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	2.19E-03
70	GO:0048232: male gamete generation	2.19E-03
71	GO:0043248: proteasome assembly	2.19E-03
72	GO:0035435: phosphate ion transmembrane transport	2.19E-03
73	GO:1900425: negative regulation of defense response to bacterium	2.19E-03
74	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	2.19E-03
75	GO:0034389: lipid particle organization	2.63E-03
76	GO:0042372: phylloquinone biosynthetic process	2.63E-03
77	GO:0009612: response to mechanical stimulus	2.63E-03
78	GO:0006694: steroid biosynthetic process	2.63E-03
79	GO:0098655: cation transmembrane transport	2.63E-03
80	GO:0009751: response to salicylic acid	2.90E-03
81	GO:1902074: response to salt	3.09E-03
82	GO:0050790: regulation of catalytic activity	3.09E-03
83	GO:0043090: amino acid import	3.09E-03
84	GO:0080186: developmental vegetative growth	3.09E-03
85	GO:1900057: positive regulation of leaf senescence	3.09E-03
86	GO:0009787: regulation of abscisic acid-activated signaling pathway	3.59E-03
87	GO:0009819: drought recovery	3.59E-03
88	GO:1900150: regulation of defense response to fungus	3.59E-03
89	GO:0010078: maintenance of root meristem identity	3.59E-03
90	GO:2000070: regulation of response to water deprivation	3.59E-03
91	GO:0030968: endoplasmic reticulum unfolded protein response	4.10E-03
92	GO:0009617: response to bacterium	4.47E-03
93	GO:0009821: alkaloid biosynthetic process	4.65E-03
94	GO:0006783: heme biosynthetic process	4.65E-03
95	GO:0045087: innate immune response	4.69E-03
96	GO:0034599: cellular response to oxidative stress	4.90E-03
97	GO:0071577: zinc II ion transmembrane transport	5.21E-03
98	GO:1900426: positive regulation of defense response to bacterium	5.21E-03
99	GO:0010205: photoinhibition	5.21E-03
100	GO:0043067: regulation of programmed cell death	5.21E-03
101	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.21E-03
102	GO:0048829: root cap development	5.80E-03
103	GO:0010015: root morphogenesis	6.41E-03
104	GO:0000038: very long-chain fatty acid metabolic process	6.41E-03
105	GO:0009089: lysine biosynthetic process via diaminopimelate	6.41E-03
106	GO:0072593: reactive oxygen species metabolic process	6.41E-03
107	GO:0009737: response to abscisic acid	7.34E-03
108	GO:0009846: pollen germination	7.58E-03
109	GO:0006812: cation transport	7.58E-03
110	GO:0009933: meristem structural organization	8.37E-03
111	GO:0009409: response to cold	1.01E-02
112	GO:2000377: regulation of reactive oxygen species metabolic process	1.05E-02
113	GO:0009863: salicylic acid mediated signaling pathway	1.05E-02
114	GO:0009620: response to fungus	1.06E-02
115	GO:0055114: oxidation-reduction process	1.12E-02
116	GO:0006825: copper ion transport	1.13E-02
117	GO:0006511: ubiquitin-dependent protein catabolic process	1.13E-02
118	GO:0071456: cellular response to hypoxia	1.29E-02
119	GO:0019748: secondary metabolic process	1.29E-02
120	GO:0030433: ubiquitin-dependent ERAD pathway	1.29E-02
121	GO:0009408: response to heat	1.34E-02
122	GO:0009625: response to insect	1.37E-02
123	GO:0006012: galactose metabolic process	1.37E-02
124	GO:0010584: pollen exine formation	1.45E-02
125	GO:0019722: calcium-mediated signaling	1.45E-02
126	GO:0009753: response to jasmonic acid	1.47E-02
127	GO:0006468: protein phosphorylation	1.53E-02
128	GO:0000413: protein peptidyl-prolyl isomerization	1.62E-02
129	GO:0010118: stomatal movement	1.62E-02
130	GO:0042631: cellular response to water deprivation	1.62E-02
131	GO:0009790: embryo development	1.70E-02
132	GO:0006885: regulation of pH	1.71E-02
133	GO:0009646: response to absence of light	1.80E-02
134	GO:0009414: response to water deprivation	1.98E-02
135	GO:0002229: defense response to oomycetes	1.99E-02
136	GO:0030163: protein catabolic process	2.18E-02
137	GO:0007166: cell surface receptor signaling pathway	2.30E-02
138	GO:0009615: response to virus	2.58E-02
139	GO:0009607: response to biotic stimulus	2.69E-02
140	GO:0042128: nitrate assimilation	2.80E-02
141	GO:0015995: chlorophyll biosynthetic process	2.90E-02
142	GO:0008219: cell death	3.12E-02
143	GO:0010311: lateral root formation	3.23E-02
144	GO:0006499: N-terminal protein myristoylation	3.35E-02
145	GO:0009407: toxin catabolic process	3.35E-02
146	GO:0007568: aging	3.46E-02
147	GO:0048527: lateral root development	3.46E-02
148	GO:0006865: amino acid transport	3.58E-02
149	GO:0009723: response to ethylene	3.60E-02
150	GO:0016051: carbohydrate biosynthetic process	3.69E-02
151	GO:0006457: protein folding	3.81E-02
152	GO:0050832: defense response to fungus	3.82E-02
153	GO:0080167: response to karrikin	3.86E-02
154	GO:0010200: response to chitin	3.99E-02
155	GO:0006508: proteolysis	4.03E-02
156	GO:0042542: response to hydrogen peroxide	4.30E-02
157	GO:0051707: response to other organism	4.42E-02
158	GO:0009644: response to high light intensity	4.68E-02
159	GO:0009965: leaf morphogenesis	4.80E-02
160	GO:0006855: drug transmembrane transport	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0016603: glutaminyl-peptide cyclotransferase activity	0.00E+00
2	GO:0004298: threonine-type endopeptidase activity	6.32E-05
3	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	9.88E-05
4	GO:0004747: ribokinase activity	9.88E-05
5	GO:0004602: glutathione peroxidase activity	9.88E-05
6	GO:0008865: fructokinase activity	1.67E-04
7	GO:0010285: L,L-diaminopimelate aminotransferase activity	2.02E-04
8	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.02E-04
9	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	2.02E-04
10	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.02E-04
11	GO:0004112: cyclic-nucleotide phosphodiesterase activity	2.02E-04
12	GO:0004048: anthranilate phosphoribosyltransferase activity	2.02E-04
13	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	2.02E-04
14	GO:0004325: ferrochelatase activity	2.02E-04
15	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	2.02E-04
16	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	2.02E-04
17	GO:0008909: isochorismate synthase activity	2.02E-04
18	GO:0005509: calcium ion binding	3.70E-04
19	GO:0004566: beta-glucuronidase activity	4.52E-04
20	GO:0003994: aconitate hydratase activity	4.52E-04
21	GO:0004061: arylformamidase activity	4.52E-04
22	GO:0004338: glucan exo-1,3-beta-glucosidase activity	4.52E-04
23	GO:0042937: tripeptide transporter activity	4.52E-04
24	GO:0004190: aspartic-type endopeptidase activity	6.71E-04
25	GO:0008430: selenium binding	7.36E-04
26	GO:0016531: copper chaperone activity	7.36E-04
27	GO:0016174: NAD(P)H oxidase activity	7.36E-04
28	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	7.36E-04
29	GO:0050833: pyruvate transmembrane transporter activity	7.36E-04
30	GO:0035529: NADH pyrophosphatase activity	1.05E-03
31	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.05E-03
32	GO:0003756: protein disulfide isomerase activity	1.28E-03
33	GO:0047134: protein-disulfide reductase activity	1.38E-03
34	GO:0042936: dipeptide transporter activity	1.40E-03
35	GO:0008233: peptidase activity	1.60E-03
36	GO:0004791: thioredoxin-disulfide reductase activity	1.72E-03
37	GO:0004356: glutamate-ammonia ligase activity	1.78E-03
38	GO:0005459: UDP-galactose transmembrane transporter activity	1.78E-03
39	GO:0005496: steroid binding	1.78E-03
40	GO:0047631: ADP-ribose diphosphatase activity	1.78E-03
41	GO:0015035: protein disulfide oxidoreductase activity	1.85E-03
42	GO:0016746: transferase activity, transferring acyl groups	1.85E-03
43	GO:0030976: thiamine pyrophosphate binding	2.19E-03
44	GO:0000210: NAD+ diphosphatase activity	2.19E-03
45	GO:0036402: proteasome-activating ATPase activity	2.19E-03
46	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.25E-03
47	GO:0008483: transaminase activity	2.54E-03
48	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	2.63E-03
49	GO:0008320: protein transmembrane transporter activity	3.09E-03
50	GO:0043295: glutathione binding	3.09E-03
51	GO:0005507: copper ion binding	3.22E-03
52	GO:0030247: polysaccharide binding	3.35E-03
53	GO:0004034: aldose 1-epimerase activity	3.59E-03
54	GO:0016301: kinase activity	3.86E-03
55	GO:0071949: FAD binding	4.65E-03
56	GO:0030955: potassium ion binding	5.21E-03
57	GO:0016844: strictosidine synthase activity	5.21E-03
58	GO:0004743: pyruvate kinase activity	5.21E-03
59	GO:0004364: glutathione transferase activity	5.80E-03
60	GO:0004129: cytochrome-c oxidase activity	6.41E-03
61	GO:0008794: arsenate reductase (glutaredoxin) activity	6.41E-03
62	GO:0005315: inorganic phosphate transmembrane transporter activity	7.70E-03
63	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	8.37E-03
64	GO:0016298: lipase activity	8.43E-03
65	GO:0017025: TBP-class protein binding	9.07E-03
66	GO:0005385: zinc ion transmembrane transporter activity	1.05E-02
67	GO:0008324: cation transmembrane transporter activity	1.13E-02
68	GO:0008810: cellulase activity	1.37E-02
69	GO:0004674: protein serine/threonine kinase activity	1.43E-02
70	GO:0005451: monovalent cation:proton antiporter activity	1.62E-02
71	GO:0046873: metal ion transmembrane transporter activity	1.71E-02
72	GO:0016853: isomerase activity	1.80E-02
73	GO:0015299: solute:proton antiporter activity	1.80E-02
74	GO:0004197: cysteine-type endopeptidase activity	2.08E-02
75	GO:0015385: sodium:proton antiporter activity	2.18E-02
76	GO:0051213: dioxygenase activity	2.58E-02
77	GO:0004683: calmodulin-dependent protein kinase activity	2.90E-02
78	GO:0004806: triglyceride lipase activity	2.90E-02
79	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.01E-02
80	GO:0004601: peroxidase activity	3.12E-02
81	GO:0016788: hydrolase activity, acting on ester bonds	3.18E-02
82	GO:0015238: drug transmembrane transporter activity	3.23E-02
83	GO:0050897: cobalt ion binding	3.46E-02
84	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.69E-02
85	GO:0000987: core promoter proximal region sequence-specific DNA binding	3.81E-02
86	GO:0043565: sequence-specific DNA binding	3.86E-02
87	GO:0051539: 4 iron, 4 sulfur cluster binding	4.05E-02
88	GO:0052689: carboxylic ester hydrolase activity	4.26E-02
89	GO:0004185: serine-type carboxypeptidase activity	4.42E-02
90	GO:0015293: symporter activity	4.80E-02
91	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
2	GO:0005783: endoplasmic reticulum	3.63E-06
3	GO:0005886: plasma membrane	4.91E-06
4	GO:0005839: proteasome core complex	6.32E-05
5	GO:0005773: vacuole	8.48E-05
6	GO:0000502: proteasome complex	1.42E-04
7	GO:0005829: cytosol	1.66E-04
8	GO:0045252: oxoglutarate dehydrogenase complex	2.02E-04
9	GO:0019773: proteasome core complex, alpha-subunit complex	2.08E-04
10	GO:0005765: lysosomal membrane	4.10E-04
11	GO:0009536: plastid	7.04E-04
12	GO:0030660: Golgi-associated vesicle membrane	1.40E-03
13	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	1.40E-03
14	GO:0005746: mitochondrial respiratory chain	1.78E-03
15	GO:0031597: cytosolic proteasome complex	2.63E-03
16	GO:0030173: integral component of Golgi membrane	2.63E-03
17	GO:0005788: endoplasmic reticulum lumen	3.01E-03
18	GO:0031595: nuclear proteasome complex	3.09E-03
19	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	3.09E-03
20	GO:0005618: cell wall	3.22E-03
21	GO:0031305: integral component of mitochondrial inner membrane	3.59E-03
22	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	3.59E-03
23	GO:0005789: endoplasmic reticulum membrane	3.83E-03
24	GO:0000326: protein storage vacuole	4.10E-03
25	GO:0005811: lipid particle	4.10E-03
26	GO:0008540: proteasome regulatory particle, base subcomplex	5.21E-03
27	GO:0048046: apoplast	7.49E-03
28	GO:0031969: chloroplast membrane	8.18E-03
29	GO:0005764: lysosome	8.37E-03
30	GO:0016021: integral component of membrane	8.46E-03
31	GO:0009507: chloroplast	8.94E-03
32	GO:0030176: integral component of endoplasmic reticulum membrane	9.07E-03
33	GO:0005758: mitochondrial intermembrane space	1.05E-02
34	GO:0005737: cytoplasm	1.94E-02
35	GO:0032580: Golgi cisterna membrane	2.28E-02
36	GO:0005778: peroxisomal membrane	2.38E-02
37	GO:0009505: plant-type cell wall	2.87E-02