GO Enrichment Analysis of Co-expressed Genes with
AT1G78860
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042593: glucose homeostasis | 0.00E+00 |
| 2 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 3 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 4 | GO:0009735: response to cytokinin | 5.82E-06 |
| 5 | GO:0015979: photosynthesis | 7.86E-06 |
| 6 | GO:0006833: water transport | 1.16E-05 |
| 7 | GO:0006810: transport | 3.02E-05 |
| 8 | GO:0034220: ion transmembrane transport | 3.85E-05 |
| 9 | GO:0010196: nonphotochemical quenching | 5.63E-05 |
| 10 | GO:0010206: photosystem II repair | 1.14E-04 |
| 11 | GO:0071370: cellular response to gibberellin stimulus | 1.18E-04 |
| 12 | GO:0051247: positive regulation of protein metabolic process | 1.18E-04 |
| 13 | GO:2000905: negative regulation of starch metabolic process | 1.18E-04 |
| 14 | GO:0071588: hydrogen peroxide mediated signaling pathway | 1.18E-04 |
| 15 | GO:0046520: sphingoid biosynthetic process | 1.18E-04 |
| 16 | GO:0009773: photosynthetic electron transport in photosystem I | 1.91E-04 |
| 17 | GO:0009725: response to hormone | 2.53E-04 |
| 18 | GO:0006521: regulation of cellular amino acid metabolic process | 2.73E-04 |
| 19 | GO:0010143: cutin biosynthetic process | 2.87E-04 |
| 20 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.41E-04 |
| 21 | GO:0015840: urea transport | 4.52E-04 |
| 22 | GO:0048586: regulation of long-day photoperiodism, flowering | 4.52E-04 |
| 23 | GO:1902476: chloride transmembrane transport | 6.47E-04 |
| 24 | GO:0051513: regulation of monopolar cell growth | 6.47E-04 |
| 25 | GO:0080170: hydrogen peroxide transmembrane transport | 6.47E-04 |
| 26 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 6.47E-04 |
| 27 | GO:0009740: gibberellic acid mediated signaling pathway | 6.51E-04 |
| 28 | GO:0010037: response to carbon dioxide | 8.60E-04 |
| 29 | GO:0015976: carbon utilization | 8.60E-04 |
| 30 | GO:2000306: positive regulation of photomorphogenesis | 8.60E-04 |
| 31 | GO:0015994: chlorophyll metabolic process | 8.60E-04 |
| 32 | GO:2000122: negative regulation of stomatal complex development | 8.60E-04 |
| 33 | GO:0030104: water homeostasis | 8.60E-04 |
| 34 | GO:0006461: protein complex assembly | 1.08E-03 |
| 35 | GO:0042549: photosystem II stabilization | 1.33E-03 |
| 36 | GO:1902456: regulation of stomatal opening | 1.33E-03 |
| 37 | GO:0045490: pectin catabolic process | 1.38E-03 |
| 38 | GO:0010019: chloroplast-nucleus signaling pathway | 1.59E-03 |
| 39 | GO:0018298: protein-chromophore linkage | 1.77E-03 |
| 40 | GO:0050829: defense response to Gram-negative bacterium | 1.87E-03 |
| 41 | GO:0006821: chloride transport | 1.87E-03 |
| 42 | GO:0046620: regulation of organ growth | 2.16E-03 |
| 43 | GO:0030091: protein repair | 2.16E-03 |
| 44 | GO:0009657: plastid organization | 2.46E-03 |
| 45 | GO:0009299: mRNA transcription | 3.46E-03 |
| 46 | GO:0009750: response to fructose | 3.82E-03 |
| 47 | GO:0010015: root morphogenesis | 3.82E-03 |
| 48 | GO:0009698: phenylpropanoid metabolic process | 3.82E-03 |
| 49 | GO:0015706: nitrate transport | 4.19E-03 |
| 50 | GO:0010207: photosystem II assembly | 4.97E-03 |
| 51 | GO:0042545: cell wall modification | 5.30E-03 |
| 52 | GO:0010030: positive regulation of seed germination | 5.37E-03 |
| 53 | GO:0010167: response to nitrate | 5.37E-03 |
| 54 | GO:0005985: sucrose metabolic process | 5.37E-03 |
| 55 | GO:0019762: glucosinolate catabolic process | 5.79E-03 |
| 56 | GO:0005992: trehalose biosynthetic process | 6.22E-03 |
| 57 | GO:0048511: rhythmic process | 7.11E-03 |
| 58 | GO:0061077: chaperone-mediated protein folding | 7.11E-03 |
| 59 | GO:0019748: secondary metabolic process | 7.57E-03 |
| 60 | GO:0035428: hexose transmembrane transport | 7.57E-03 |
| 61 | GO:0006284: base-excision repair | 8.53E-03 |
| 62 | GO:0080022: primary root development | 9.53E-03 |
| 63 | GO:0000413: protein peptidyl-prolyl isomerization | 9.53E-03 |
| 64 | GO:0010087: phloem or xylem histogenesis | 9.53E-03 |
| 65 | GO:0046323: glucose import | 1.00E-02 |
| 66 | GO:0042752: regulation of circadian rhythm | 1.06E-02 |
| 67 | GO:0009749: response to glucose | 1.11E-02 |
| 68 | GO:0008654: phospholipid biosynthetic process | 1.11E-02 |
| 69 | GO:0000302: response to reactive oxygen species | 1.16E-02 |
| 70 | GO:0030163: protein catabolic process | 1.28E-02 |
| 71 | GO:0009651: response to salt stress | 1.30E-02 |
| 72 | GO:0055085: transmembrane transport | 1.44E-02 |
| 73 | GO:0009658: chloroplast organization | 1.46E-02 |
| 74 | GO:0042254: ribosome biogenesis | 1.49E-02 |
| 75 | GO:0010029: regulation of seed germination | 1.57E-02 |
| 76 | GO:0042128: nitrate assimilation | 1.63E-02 |
| 77 | GO:0010411: xyloglucan metabolic process | 1.70E-02 |
| 78 | GO:0015995: chlorophyll biosynthetic process | 1.70E-02 |
| 79 | GO:0080167: response to karrikin | 1.82E-02 |
| 80 | GO:0009817: defense response to fungus, incompatible interaction | 1.82E-02 |
| 81 | GO:0000160: phosphorelay signal transduction system | 1.89E-02 |
| 82 | GO:0010218: response to far red light | 1.96E-02 |
| 83 | GO:0009631: cold acclimation | 2.02E-02 |
| 84 | GO:0010119: regulation of stomatal movement | 2.02E-02 |
| 85 | GO:0009637: response to blue light | 2.16E-02 |
| 86 | GO:0034599: cellular response to oxidative stress | 2.23E-02 |
| 87 | GO:0010114: response to red light | 2.59E-02 |
| 88 | GO:0009926: auxin polar transport | 2.59E-02 |
| 89 | GO:0009744: response to sucrose | 2.59E-02 |
| 90 | GO:0009640: photomorphogenesis | 2.59E-02 |
| 91 | GO:0042742: defense response to bacterium | 2.60E-02 |
| 92 | GO:0006979: response to oxidative stress | 2.62E-02 |
| 93 | GO:0042546: cell wall biogenesis | 2.66E-02 |
| 94 | GO:0006412: translation | 2.75E-02 |
| 95 | GO:0006855: drug transmembrane transport | 2.88E-02 |
| 96 | GO:0008152: metabolic process | 2.96E-02 |
| 97 | GO:0009736: cytokinin-activated signaling pathway | 3.20E-02 |
| 98 | GO:0006857: oligopeptide transport | 3.36E-02 |
| 99 | GO:0006508: proteolysis | 3.50E-02 |
| 100 | GO:0009624: response to nematode | 4.11E-02 |
| 101 | GO:0009742: brassinosteroid mediated signaling pathway | 4.28E-02 |
| 102 | GO:0005975: carbohydrate metabolic process | 4.35E-02 |
| 103 | GO:0009738: abscisic acid-activated signaling pathway | 4.58E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity | 0.00E+00 |
| 2 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 7.07E-07 |
| 3 | GO:0015250: water channel activity | 3.92E-06 |
| 4 | GO:0005528: FK506 binding | 1.39E-05 |
| 5 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.66E-05 |
| 6 | GO:0015200: methylammonium transmembrane transporter activity | 1.18E-04 |
| 7 | GO:0000170: sphingosine hydroxylase activity | 1.18E-04 |
| 8 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 1.18E-04 |
| 9 | GO:0009671: nitrate:proton symporter activity | 1.18E-04 |
| 10 | GO:0047746: chlorophyllase activity | 2.73E-04 |
| 11 | GO:0016868: intramolecular transferase activity, phosphotransferases | 2.73E-04 |
| 12 | GO:0043425: bHLH transcription factor binding | 2.73E-04 |
| 13 | GO:0042284: sphingolipid delta-4 desaturase activity | 2.73E-04 |
| 14 | GO:0008967: phosphoglycolate phosphatase activity | 2.73E-04 |
| 15 | GO:0031409: pigment binding | 3.60E-04 |
| 16 | GO:0004324: ferredoxin-NADP+ reductase activity | 4.52E-04 |
| 17 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 4.52E-04 |
| 18 | GO:0050734: hydroxycinnamoyltransferase activity | 4.52E-04 |
| 19 | GO:0005253: anion channel activity | 8.60E-04 |
| 20 | GO:0015204: urea transmembrane transporter activity | 8.60E-04 |
| 21 | GO:0019843: rRNA binding | 9.26E-04 |
| 22 | GO:0008725: DNA-3-methyladenine glycosylase activity | 1.08E-03 |
| 23 | GO:0003959: NADPH dehydrogenase activity | 1.08E-03 |
| 24 | GO:0016688: L-ascorbate peroxidase activity | 1.33E-03 |
| 25 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.33E-03 |
| 26 | GO:0008519: ammonium transmembrane transporter activity | 1.33E-03 |
| 27 | GO:0005247: voltage-gated chloride channel activity | 1.33E-03 |
| 28 | GO:0004130: cytochrome-c peroxidase activity | 1.33E-03 |
| 29 | GO:0016168: chlorophyll binding | 1.44E-03 |
| 30 | GO:0004602: glutathione peroxidase activity | 1.59E-03 |
| 31 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.59E-03 |
| 32 | GO:0004564: beta-fructofuranosidase activity | 2.16E-03 |
| 33 | GO:0003993: acid phosphatase activity | 2.33E-03 |
| 34 | GO:0004185: serine-type carboxypeptidase activity | 2.86E-03 |
| 35 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.09E-03 |
| 36 | GO:0015112: nitrate transmembrane transporter activity | 3.12E-03 |
| 37 | GO:0004575: sucrose alpha-glucosidase activity | 3.12E-03 |
| 38 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.42E-03 |
| 39 | GO:0004805: trehalose-phosphatase activity | 3.46E-03 |
| 40 | GO:0045330: aspartyl esterase activity | 4.25E-03 |
| 41 | GO:0004089: carbonate dehydratase activity | 4.57E-03 |
| 42 | GO:0031072: heat shock protein binding | 4.57E-03 |
| 43 | GO:0008266: poly(U) RNA binding | 4.97E-03 |
| 44 | GO:0030599: pectinesterase activity | 5.14E-03 |
| 45 | GO:0003735: structural constituent of ribosome | 5.25E-03 |
| 46 | GO:0008146: sulfotransferase activity | 5.37E-03 |
| 47 | GO:0004252: serine-type endopeptidase activity | 7.58E-03 |
| 48 | GO:0030570: pectate lyase activity | 8.05E-03 |
| 49 | GO:0003727: single-stranded RNA binding | 8.53E-03 |
| 50 | GO:0003756: protein disulfide isomerase activity | 8.53E-03 |
| 51 | GO:0005355: glucose transmembrane transporter activity | 1.06E-02 |
| 52 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.16E-02 |
| 53 | GO:0000156: phosphorelay response regulator activity | 1.28E-02 |
| 54 | GO:0016791: phosphatase activity | 1.33E-02 |
| 55 | GO:0016597: amino acid binding | 1.45E-02 |
| 56 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.70E-02 |
| 57 | GO:0102483: scopolin beta-glucosidase activity | 1.70E-02 |
| 58 | GO:0008236: serine-type peptidase activity | 1.76E-02 |
| 59 | GO:0015238: drug transmembrane transporter activity | 1.89E-02 |
| 60 | GO:0008422: beta-glucosidase activity | 2.30E-02 |
| 61 | GO:0015293: symporter activity | 2.81E-02 |
| 62 | GO:0005215: transporter activity | 2.94E-02 |
| 63 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 3.68E-02 |
| 64 | GO:0046983: protein dimerization activity | 3.72E-02 |
| 65 | GO:0008289: lipid binding | 3.73E-02 |
| 66 | GO:0004650: polygalacturonase activity | 3.85E-02 |
| 67 | GO:0051082: unfolded protein binding | 4.11E-02 |
| 68 | GO:0016746: transferase activity, transferring acyl groups | 4.19E-02 |
| 69 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 4.36E-17 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 1.81E-16 |
| 4 | GO:0009534: chloroplast thylakoid | 1.51E-11 |
| 5 | GO:0009543: chloroplast thylakoid lumen | 9.04E-09 |
| 6 | GO:0009570: chloroplast stroma | 1.47E-07 |
| 7 | GO:0009941: chloroplast envelope | 1.71E-07 |
| 8 | GO:0030095: chloroplast photosystem II | 7.86E-06 |
| 9 | GO:0042807: central vacuole | 5.63E-05 |
| 10 | GO:0009533: chloroplast stromal thylakoid | 5.63E-05 |
| 11 | GO:0009579: thylakoid | 1.12E-04 |
| 12 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.14E-04 |
| 13 | GO:0043674: columella | 1.18E-04 |
| 14 | GO:0009783: photosystem II antenna complex | 1.18E-04 |
| 15 | GO:0009705: plant-type vacuole membrane | 1.84E-04 |
| 16 | GO:0031977: thylakoid lumen | 2.74E-04 |
| 17 | GO:0042651: thylakoid membrane | 4.41E-04 |
| 18 | GO:0005775: vacuolar lumen | 6.47E-04 |
| 19 | GO:0009522: photosystem I | 8.40E-04 |
| 20 | GO:0009523: photosystem II | 8.98E-04 |
| 21 | GO:0016020: membrane | 1.08E-03 |
| 22 | GO:0034707: chloride channel complex | 1.33E-03 |
| 23 | GO:0005887: integral component of plasma membrane | 1.49E-03 |
| 24 | GO:0009505: plant-type cell wall | 2.34E-03 |
| 25 | GO:0000326: protein storage vacuole | 2.46E-03 |
| 26 | GO:0000311: plastid large ribosomal subunit | 4.19E-03 |
| 27 | GO:0030076: light-harvesting complex | 5.37E-03 |
| 28 | GO:0009706: chloroplast inner membrane | 5.46E-03 |
| 29 | GO:0010287: plastoglobule | 6.47E-03 |
| 30 | GO:0009654: photosystem II oxygen evolving complex | 6.66E-03 |
| 31 | GO:0005840: ribosome | 7.03E-03 |
| 32 | GO:0019898: extrinsic component of membrane | 1.11E-02 |
| 33 | GO:0071944: cell periphery | 1.28E-02 |
| 34 | GO:0005774: vacuolar membrane | 1.37E-02 |
| 35 | GO:0005618: cell wall | 1.73E-02 |
| 36 | GO:0031969: chloroplast membrane | 1.82E-02 |
| 37 | GO:0015934: large ribosomal subunit | 2.02E-02 |
| 38 | GO:0000325: plant-type vacuole | 2.02E-02 |
| 39 | GO:0009506: plasmodesma | 2.26E-02 |
| 40 | GO:0031902: late endosome membrane | 2.44E-02 |
| 41 | GO:0005773: vacuole | 2.83E-02 |
| 42 | GO:0016021: integral component of membrane | 3.39E-02 |