co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G78610

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071474: cellular hyperosmotic response	0.00E+00
2	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
3	GO:0002184: cytoplasmic translational termination	0.00E+00
4	GO:0006780: uroporphyrinogen III biosynthetic process	0.00E+00
5	GO:0007638: mechanosensory behavior	0.00E+00
6	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
7	GO:0090279: regulation of calcium ion import	0.00E+00
8	GO:0015805: S-adenosyl-L-methionine transport	0.00E+00
9	GO:0099131: ATP hydrolysis coupled ion transmembrane transport	0.00E+00
10	GO:0010480: microsporocyte differentiation	0.00E+00
11	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.43E-06
12	GO:0048437: floral organ development	2.30E-04
13	GO:0080051: cutin transport	2.92E-04
14	GO:2000021: regulation of ion homeostasis	2.92E-04
15	GO:0060627: regulation of vesicle-mediated transport	2.92E-04
16	GO:0015808: L-alanine transport	2.92E-04
17	GO:0043266: regulation of potassium ion transport	2.92E-04
18	GO:0031338: regulation of vesicle fusion	2.92E-04
19	GO:0071554: cell wall organization or biogenesis	3.69E-04
20	GO:0098712: L-glutamate import across plasma membrane	6.40E-04
21	GO:0010289: homogalacturonan biosynthetic process	6.40E-04
22	GO:0015804: neutral amino acid transport	6.40E-04
23	GO:0051262: protein tetramerization	6.40E-04
24	GO:0010198: synergid death	6.40E-04
25	GO:0015908: fatty acid transport	6.40E-04
26	GO:0045717: negative regulation of fatty acid biosynthetic process	6.40E-04
27	GO:0010541: acropetal auxin transport	6.40E-04
28	GO:0048229: gametophyte development	6.86E-04
29	GO:0015995: chlorophyll biosynthetic process	7.31E-04
30	GO:0010411: xyloglucan metabolic process	7.31E-04
31	GO:0010075: regulation of meristem growth	8.88E-04
32	GO:0009934: regulation of meristem structural organization	9.97E-04
33	GO:0010020: chloroplast fission	9.97E-04
34	GO:0090630: activation of GTPase activity	1.04E-03
35	GO:2001295: malonyl-CoA biosynthetic process	1.04E-03
36	GO:0006518: peptide metabolic process	1.04E-03
37	GO:0010160: formation of animal organ boundary	1.04E-03
38	GO:0005975: carbohydrate metabolic process	1.18E-03
39	GO:0043572: plastid fission	1.48E-03
40	GO:0055070: copper ion homeostasis	1.48E-03
41	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.48E-03
42	GO:0007231: osmosensory signaling pathway	1.48E-03
43	GO:0051639: actin filament network formation	1.48E-03
44	GO:0043481: anthocyanin accumulation in tissues in response to UV light	1.48E-03
45	GO:0051016: barbed-end actin filament capping	1.48E-03
46	GO:0042546: cell wall biogenesis	1.61E-03
47	GO:0016998: cell wall macromolecule catabolic process	1.66E-03
48	GO:0010021: amylopectin biosynthetic process	1.99E-03
49	GO:0010222: stem vascular tissue pattern formation	1.99E-03
50	GO:0051764: actin crosslink formation	1.99E-03
51	GO:0033500: carbohydrate homeostasis	1.99E-03
52	GO:0006552: leucine catabolic process	1.99E-03
53	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	1.99E-03
54	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.32E-03
55	GO:0048653: anther development	2.51E-03
56	GO:0035434: copper ion transmembrane transport	2.54E-03
57	GO:0007094: mitotic spindle assembly checkpoint	2.54E-03
58	GO:0016123: xanthophyll biosynthetic process	2.54E-03
59	GO:0000304: response to singlet oxygen	2.54E-03
60	GO:0016120: carotene biosynthetic process	2.54E-03
61	GO:0010405: arabinogalactan protein metabolic process	3.14E-03
62	GO:0006751: glutathione catabolic process	3.14E-03
63	GO:0042549: photosystem II stabilization	3.14E-03
64	GO:0010256: endomembrane system organization	3.14E-03
65	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	3.14E-03
66	GO:0006655: phosphatidylglycerol biosynthetic process	3.14E-03
67	GO:0060918: auxin transport	3.14E-03
68	GO:0006796: phosphate-containing compound metabolic process	3.14E-03
69	GO:0018258: protein O-linked glycosylation via hydroxyproline	3.14E-03
70	GO:0006574: valine catabolic process	3.14E-03
71	GO:0009082: branched-chain amino acid biosynthetic process	3.77E-03
72	GO:2000033: regulation of seed dormancy process	3.77E-03
73	GO:1901657: glycosyl compound metabolic process	3.80E-03
74	GO:0098869: cellular oxidant detoxification	4.45E-03
75	GO:0009395: phospholipid catabolic process	4.45E-03
76	GO:0043090: amino acid import	4.45E-03
77	GO:0051693: actin filament capping	4.45E-03
78	GO:0006468: protein phosphorylation	4.55E-03
79	GO:0010027: thylakoid membrane organization	4.82E-03
80	GO:0016559: peroxisome fission	5.17E-03
81	GO:0071482: cellular response to light stimulus	5.92E-03
82	GO:0009657: plastid organization	5.92E-03
83	GO:0006526: arginine biosynthetic process	5.92E-03
84	GO:0032544: plastid translation	5.92E-03
85	GO:0009817: defense response to fungus, incompatible interaction	6.29E-03
86	GO:0016042: lipid catabolic process	6.40E-03
87	GO:0006754: ATP biosynthetic process	6.71E-03
88	GO:0000902: cell morphogenesis	6.71E-03
89	GO:0090305: nucleic acid phosphodiester bond hydrolysis	6.71E-03
90	GO:0045490: pectin catabolic process	7.04E-03
91	GO:0006779: porphyrin-containing compound biosynthetic process	7.54E-03
92	GO:1900865: chloroplast RNA modification	7.54E-03
93	GO:0007346: regulation of mitotic cell cycle	7.54E-03
94	GO:0010162: seed dormancy process	8.40E-03
95	GO:0006782: protoporphyrinogen IX biosynthetic process	8.40E-03
96	GO:0030001: metal ion transport	9.10E-03
97	GO:0018119: peptidyl-cysteine S-nitrosylation	9.30E-03
98	GO:0046856: phosphatidylinositol dephosphorylation	9.30E-03
99	GO:0006816: calcium ion transport	9.30E-03
100	GO:0006415: translational termination	9.30E-03
101	GO:0009807: lignan biosynthetic process	9.30E-03
102	GO:1903507: negative regulation of nucleic acid-templated transcription	9.30E-03
103	GO:0008361: regulation of cell size	1.02E-02
104	GO:0012501: programmed cell death	1.02E-02
105	GO:0016310: phosphorylation	1.02E-02
106	GO:0016024: CDP-diacylglycerol biosynthetic process	1.02E-02
107	GO:0030036: actin cytoskeleton organization	1.12E-02
108	GO:0009767: photosynthetic electron transport chain	1.12E-02
109	GO:0010588: cotyledon vascular tissue pattern formation	1.12E-02
110	GO:0010102: lateral root morphogenesis	1.12E-02
111	GO:0010540: basipetal auxin transport	1.22E-02
112	GO:0007015: actin filament organization	1.22E-02
113	GO:0009658: chloroplast organization	1.23E-02
114	GO:0042538: hyperosmotic salinity response	1.30E-02
115	GO:0010030: positive regulation of seed germination	1.32E-02
116	GO:0070588: calcium ion transmembrane transport	1.32E-02
117	GO:0071732: cellular response to nitric oxide	1.32E-02
118	GO:0007010: cytoskeleton organization	1.54E-02
119	GO:0051017: actin filament bundle assembly	1.54E-02
120	GO:0008299: isoprenoid biosynthetic process	1.65E-02
121	GO:0007017: microtubule-based process	1.65E-02
122	GO:0031408: oxylipin biosynthetic process	1.76E-02
123	GO:0035428: hexose transmembrane transport	1.88E-02
124	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.88E-02
125	GO:0015979: photosynthesis	1.91E-02
126	GO:0042545: cell wall modification	1.93E-02
127	GO:0009624: response to nematode	1.99E-02
128	GO:0071369: cellular response to ethylene stimulus	2.00E-02
129	GO:0009306: protein secretion	2.12E-02
130	GO:0048443: stamen development	2.12E-02
131	GO:0016117: carotenoid biosynthetic process	2.25E-02
132	GO:0000413: protein peptidyl-prolyl isomerization	2.37E-02
133	GO:0042631: cellular response to water deprivation	2.37E-02
134	GO:0010182: sugar mediated signaling pathway	2.50E-02
135	GO:0046323: glucose import	2.50E-02
136	GO:0009958: positive gravitropism	2.50E-02
137	GO:0006520: cellular amino acid metabolic process	2.50E-02
138	GO:0019252: starch biosynthetic process	2.77E-02
139	GO:0042744: hydrogen peroxide catabolic process	2.83E-02
140	GO:0080156: mitochondrial mRNA modification	2.91E-02
141	GO:0006633: fatty acid biosynthetic process	3.13E-02
142	GO:0030163: protein catabolic process	3.19E-02
143	GO:0071281: cellular response to iron ion	3.19E-02
144	GO:0016125: sterol metabolic process	3.34E-02
145	GO:0009639: response to red or far red light	3.34E-02
146	GO:0016126: sterol biosynthetic process	3.78E-02
147	GO:0009627: systemic acquired resistance	4.09E-02
148	GO:0042128: nitrate assimilation	4.09E-02
149	GO:0071555: cell wall organization	4.49E-02
150	GO:0030244: cellulose biosynthetic process	4.57E-02
151	GO:0010218: response to far red light	4.89E-02
152	GO:0009407: toxin catabolic process	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0004852: uroporphyrinogen-III synthase activity	0.00E+00
2	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
3	GO:0005227: calcium activated cation channel activity	0.00E+00
4	GO:0047513: 1,2-alpha-L-fucosidase activity	0.00E+00
5	GO:0004496: mevalonate kinase activity	0.00E+00
6	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
7	GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity	0.00E+00
8	GO:0001872: (1->3)-beta-D-glucan binding	3.12E-05
9	GO:0004565: beta-galactosidase activity	5.13E-05
10	GO:0015245: fatty acid transporter activity	2.92E-04
11	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	2.92E-04
12	GO:0015194: L-serine transmembrane transporter activity	2.92E-04
13	GO:0003867: 4-aminobutyrate transaminase activity	2.92E-04
14	GO:0004856: xylulokinase activity	2.92E-04
15	GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity	2.92E-04
16	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.69E-04
17	GO:0016413: O-acetyltransferase activity	5.53E-04
18	GO:0016788: hydrolase activity, acting on ester bonds	5.78E-04
19	GO:0010283: pinoresinol reductase activity	6.40E-04
20	GO:0003839: gamma-glutamylcyclotransferase activity	6.40E-04
21	GO:0033201: alpha-1,4-glucan synthase activity	6.40E-04
22	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	6.40E-04
23	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	6.40E-04
24	GO:0015180: L-alanine transmembrane transporter activity	6.40E-04
25	GO:0016798: hydrolase activity, acting on glycosyl bonds	7.31E-04
26	GO:0052689: carboxylic ester hydrolase activity	9.75E-04
27	GO:0030267: glyoxylate reductase (NADP) activity	1.04E-03
28	GO:0070402: NADPH binding	1.04E-03
29	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	1.04E-03
30	GO:0016531: copper chaperone activity	1.04E-03
31	GO:0004373: glycogen (starch) synthase activity	1.04E-03
32	GO:0019829: cation-transporting ATPase activity	1.04E-03
33	GO:0015193: L-proline transmembrane transporter activity	1.04E-03
34	GO:0004075: biotin carboxylase activity	1.04E-03
35	GO:0004674: protein serine/threonine kinase activity	1.22E-03
36	GO:0005528: FK506 binding	1.37E-03
37	GO:0043023: ribosomal large subunit binding	1.48E-03
38	GO:0052654: L-leucine transaminase activity	1.48E-03
39	GO:0052655: L-valine transaminase activity	1.48E-03
40	GO:0015186: L-glutamine transmembrane transporter activity	1.48E-03
41	GO:0015175: neutral amino acid transmembrane transporter activity	1.48E-03
42	GO:0004445: inositol-polyphosphate 5-phosphatase activity	1.48E-03
43	GO:0016149: translation release factor activity, codon specific	1.48E-03
44	GO:0016851: magnesium chelatase activity	1.48E-03
45	GO:0052656: L-isoleucine transaminase activity	1.48E-03
46	GO:0033612: receptor serine/threonine kinase binding	1.66E-03
47	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.86E-03
48	GO:0016836: hydro-lyase activity	1.99E-03
49	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.99E-03
50	GO:0005313: L-glutamate transmembrane transporter activity	1.99E-03
51	GO:0052793: pectin acetylesterase activity	1.99E-03
52	GO:0004084: branched-chain-amino-acid transaminase activity	1.99E-03
53	GO:0009011: starch synthase activity	1.99E-03
54	GO:0008526: phosphatidylinositol transporter activity	1.99E-03
55	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.06E-03
56	GO:0003989: acetyl-CoA carboxylase activity	2.54E-03
57	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.54E-03
58	GO:0017137: Rab GTPase binding	2.54E-03
59	GO:1990714: hydroxyproline O-galactosyltransferase activity	3.14E-03
60	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	3.14E-03
61	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	3.14E-03
62	GO:0042578: phosphoric ester hydrolase activity	3.14E-03
63	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	3.77E-03
64	GO:0051920: peroxiredoxin activity	3.77E-03
65	GO:0015631: tubulin binding	3.77E-03
66	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	3.77E-03
67	GO:0005261: cation channel activity	3.77E-03
68	GO:0051015: actin filament binding	3.80E-03
69	GO:0004427: inorganic diphosphatase activity	4.45E-03
70	GO:0016301: kinase activity	4.58E-03
71	GO:0016209: antioxidant activity	5.17E-03
72	GO:0004033: aldo-keto reductase (NADP) activity	5.17E-03
73	GO:0102483: scopolin beta-glucosidase activity	5.68E-03
74	GO:0030247: polysaccharide binding	5.68E-03
75	GO:0005375: copper ion transmembrane transporter activity	5.92E-03
76	GO:0005524: ATP binding	6.56E-03
77	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	6.71E-03
78	GO:0003747: translation release factor activity	6.71E-03
79	GO:0004222: metalloendopeptidase activity	6.94E-03
80	GO:0030145: manganese ion binding	7.28E-03
81	GO:0008017: microtubule binding	7.46E-03
82	GO:0008422: beta-glucosidase activity	8.72E-03
83	GO:0047372: acylglycerol lipase activity	9.30E-03
84	GO:0008378: galactosyltransferase activity	1.02E-02
85	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	1.02E-02
86	GO:0005262: calcium channel activity	1.12E-02
87	GO:0010329: auxin efflux transmembrane transporter activity	1.12E-02
88	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.12E-02
89	GO:0015293: symporter activity	1.16E-02
90	GO:0004601: peroxidase activity	1.23E-02
91	GO:0004190: aspartic-type endopeptidase activity	1.32E-02
92	GO:0003714: transcription corepressor activity	1.54E-02
93	GO:0045330: aspartyl esterase activity	1.54E-02
94	GO:0008324: cation transmembrane transporter activity	1.65E-02
95	GO:0004707: MAP kinase activity	1.76E-02
96	GO:0004176: ATP-dependent peptidase activity	1.76E-02
97	GO:0030599: pectinesterase activity	1.87E-02
98	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.88E-02
99	GO:0030570: pectate lyase activity	2.00E-02
100	GO:0016758: transferase activity, transferring hexosyl groups	2.42E-02
101	GO:0003924: GTPase activity	2.64E-02
102	GO:0016853: isomerase activity	2.64E-02
103	GO:0005355: glucose transmembrane transporter activity	2.64E-02
104	GO:0019901: protein kinase binding	2.77E-02
105	GO:0004672: protein kinase activity	2.90E-02
106	GO:0048038: quinone binding	2.91E-02
107	GO:0004518: nuclease activity	3.05E-02
108	GO:0008237: metallopeptidase activity	3.48E-02
109	GO:0005200: structural constituent of cytoskeleton	3.48E-02
110	GO:0004721: phosphoprotein phosphatase activity	4.25E-02
111	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.35E-02
112	GO:0016887: ATPase activity	4.53E-02
113	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.57E-02
114	GO:0005096: GTPase activator activity	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0009570: chloroplast stroma	2.05E-08
2	GO:0009507: chloroplast	1.41E-07
3	GO:0005886: plasma membrane	2.93E-06
4	GO:0009941: chloroplast envelope	8.75E-06
5	GO:0009534: chloroplast thylakoid	1.82E-05
6	GO:0009505: plant-type cell wall	4.95E-05
7	GO:0048046: apoplast	4.95E-04
8	GO:0008290: F-actin capping protein complex	6.40E-04
9	GO:0005618: cell wall	6.44E-04
10	GO:0005884: actin filament	6.86E-04
11	GO:0009536: plastid	7.14E-04
12	GO:0031969: chloroplast membrane	8.19E-04
13	GO:0009543: chloroplast thylakoid lumen	8.44E-04
14	GO:0010007: magnesium chelatase complex	1.04E-03
15	GO:0009897: external side of plasma membrane	1.04E-03
16	GO:0031977: thylakoid lumen	1.38E-03
17	GO:0015630: microtubule cytoskeleton	1.48E-03
18	GO:0032432: actin filament bundle	1.48E-03
19	GO:0009579: thylakoid	1.69E-03
20	GO:0005828: kinetochore microtubule	1.99E-03
21	GO:0005576: extracellular region	2.21E-03
22	GO:0000776: kinetochore	2.54E-03
23	GO:0009535: chloroplast thylakoid membrane	3.00E-03
24	GO:0010369: chromocenter	3.77E-03
25	GO:0000777: condensed chromosome kinetochore	3.77E-03
26	GO:0016021: integral component of membrane	4.82E-03
27	GO:0009501: amyloplast	5.17E-03
28	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	6.71E-03
29	GO:0005876: spindle microtubule	7.54E-03
30	GO:0030095: chloroplast photosystem II	1.22E-02
31	GO:0043234: protein complex	1.43E-02
32	GO:0005874: microtubule	1.55E-02
33	GO:0009654: photosystem II oxygen evolving complex	1.65E-02
34	GO:0010287: plastoglobule	2.36E-02
35	GO:0000139: Golgi membrane	2.53E-02
36	GO:0019898: extrinsic component of membrane	2.77E-02
37	GO:0009705: plant-type vacuole membrane	3.43E-02
38	GO:0005768: endosome	3.86E-02
39	GO:0046658: anchored component of plasma membrane	4.53E-02
40	GO:0009707: chloroplast outer membrane	4.57E-02