Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G78040

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0019323: pentose catabolic process0.00E+00
2GO:0042493: response to drug0.00E+00
3GO:0006085: acetyl-CoA biosynthetic process5.16E-06
4GO:0006869: lipid transport2.82E-05
5GO:0060627: regulation of vesicle-mediated transport7.23E-05
6GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process7.23E-05
7GO:0000032: cell wall mannoprotein biosynthetic process7.23E-05
8GO:0032025: response to cobalt ion7.23E-05
9GO:0044262: cellular carbohydrate metabolic process7.23E-05
10GO:1902458: positive regulation of stomatal opening7.23E-05
11GO:0007568: aging7.44E-05
12GO:0010015: root morphogenesis9.43E-05
13GO:1903426: regulation of reactive oxygen species biosynthetic process1.74E-04
14GO:0005975: carbohydrate metabolic process2.12E-04
15GO:0033591: response to L-ascorbic acid2.93E-04
16GO:0045793: positive regulation of cell size2.93E-04
17GO:0006065: UDP-glucuronate biosynthetic process2.93E-04
18GO:0009831: plant-type cell wall modification involved in multidimensional cell growth3.04E-04
19GO:0016042: lipid catabolic process3.32E-04
20GO:0043481: anthocyanin accumulation in tissues in response to UV light4.23E-04
21GO:0009052: pentose-phosphate shunt, non-oxidative branch4.23E-04
22GO:0009650: UV protection4.23E-04
23GO:0010306: rhamnogalacturonan II biosynthetic process4.23E-04
24GO:0050482: arachidonic acid secretion4.23E-04
25GO:0009298: GDP-mannose biosynthetic process4.23E-04
26GO:0071555: cell wall organization4.94E-04
27GO:0010583: response to cyclopentenone5.49E-04
28GO:0006183: GTP biosynthetic process5.65E-04
29GO:0009956: radial pattern formation5.65E-04
30GO:0009828: plant-type cell wall loosening6.19E-04
31GO:0045038: protein import into chloroplast thylakoid membrane7.14E-04
32GO:0015995: chlorophyll biosynthetic process8.59E-04
33GO:0010411: xyloglucan metabolic process8.59E-04
34GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway8.73E-04
35GO:0009826: unidimensional cell growth1.01E-03
36GO:0009612: response to mechanical stimulus1.04E-03
37GO:0009645: response to low light intensity stimulus1.21E-03
38GO:0045995: regulation of embryonic development1.21E-03
39GO:2000070: regulation of response to water deprivation1.40E-03
40GO:0006644: phospholipid metabolic process1.40E-03
41GO:0042546: cell wall biogenesis1.57E-03
42GO:0015996: chlorophyll catabolic process1.59E-03
43GO:0007186: G-protein coupled receptor signaling pathway1.59E-03
44GO:0009664: plant-type cell wall organization1.89E-03
45GO:0042761: very long-chain fatty acid biosynthetic process2.01E-03
46GO:0006949: syncytium formation2.23E-03
47GO:0009773: photosynthetic electron transport in photosystem I2.46E-03
48GO:0002213: defense response to insect2.70E-03
49GO:0016024: CDP-diacylglycerol biosynthetic process2.70E-03
50GO:0045037: protein import into chloroplast stroma2.70E-03
51GO:0009624: response to nematode2.86E-03
52GO:0010143: cutin biosynthetic process3.19E-03
53GO:0009933: meristem structural organization3.19E-03
54GO:0010207: photosystem II assembly3.19E-03
55GO:0010025: wax biosynthetic process3.71E-03
56GO:0006636: unsaturated fatty acid biosynthetic process3.71E-03
57GO:0006833: water transport3.71E-03
58GO:0019762: glucosinolate catabolic process3.71E-03
59GO:0051017: actin filament bundle assembly3.98E-03
60GO:0007017: microtubule-based process4.26E-03
61GO:0009738: abscisic acid-activated signaling pathway4.44E-03
62GO:0030245: cellulose catabolic process4.83E-03
63GO:0031348: negative regulation of defense response4.83E-03
64GO:0045490: pectin catabolic process4.91E-03
65GO:0009411: response to UV5.13E-03
66GO:0019722: calcium-mediated signaling5.43E-03
67GO:0016117: carotenoid biosynthetic process5.74E-03
68GO:0009789: positive regulation of abscisic acid-activated signaling pathway5.74E-03
69GO:0042335: cuticle development6.05E-03
70GO:0034220: ion transmembrane transport6.05E-03
71GO:0010305: leaf vascular tissue pattern formation6.38E-03
72GO:0010182: sugar mediated signaling pathway6.38E-03
73GO:0048868: pollen tube development6.38E-03
74GO:0019252: starch biosynthetic process7.04E-03
75GO:0007267: cell-cell signaling8.79E-03
76GO:0009911: positive regulation of flower development9.54E-03
77GO:0010027: thylakoid membrane organization9.54E-03
78GO:0009627: systemic acquired resistance1.03E-02
79GO:0015979: photosynthesis1.08E-02
80GO:0045454: cell redox homeostasis1.13E-02
81GO:0009834: plant-type secondary cell wall biogenesis1.23E-02
82GO:0010119: regulation of stomatal movement1.27E-02
83GO:0010043: response to zinc ion1.27E-02
84GO:0045087: innate immune response1.36E-02
85GO:0006629: lipid metabolic process1.39E-02
86GO:0009409: response to cold1.67E-02
87GO:0042538: hyperosmotic salinity response1.91E-02
88GO:0006486: protein glycosylation2.01E-02
89GO:0009740: gibberellic acid mediated signaling pathway2.47E-02
90GO:0007165: signal transduction2.86E-02
91GO:0009737: response to abscisic acid2.94E-02
92GO:0006633: fatty acid biosynthetic process3.56E-02
93GO:0009739: response to gibberellin4.13E-02
94GO:0007166: cell surface receptor signaling pathway4.19E-02
RankGO TermAdjusted P value
1GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
2GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
3GO:0003878: ATP citrate synthase activity2.69E-06
4GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.69E-05
5GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity7.23E-05
6GO:0004476: mannose-6-phosphate isomerase activity7.23E-05
7GO:0008289: lipid binding7.69E-05
8GO:0004750: ribulose-phosphate 3-epimerase activity1.74E-04
9GO:0016630: protochlorophyllide reductase activity1.74E-04
10GO:0003938: IMP dehydrogenase activity1.74E-04
11GO:0003979: UDP-glucose 6-dehydrogenase activity2.93E-04
12GO:0030570: pectate lyase activity3.04E-04
13GO:0016829: lyase activity4.53E-04
14GO:0016762: xyloglucan:xyloglucosyl transferase activity5.15E-04
15GO:0004623: phospholipase A2 activity7.14E-04
16GO:0016798: hydrolase activity, acting on glycosyl bonds8.59E-04
17GO:0004629: phospholipase C activity8.73E-04
18GO:0004366: glycerol-3-phosphate O-acyltransferase activity8.73E-04
19GO:0019137: thioglucosidase activity8.73E-04
20GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity8.73E-04
21GO:0004435: phosphatidylinositol phospholipase C activity1.04E-03
22GO:0051920: peroxiredoxin activity1.04E-03
23GO:0004869: cysteine-type endopeptidase inhibitor activity1.40E-03
24GO:0016209: antioxidant activity1.40E-03
25GO:0052689: carboxylic ester hydrolase activity1.56E-03
26GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water1.59E-03
27GO:0030234: enzyme regulator activity2.23E-03
28GO:0008810: cellulase activity5.13E-03
29GO:0016788: hydrolase activity, acting on ester bonds7.73E-03
30GO:0051015: actin filament binding8.07E-03
31GO:0016791: phosphatase activity8.43E-03
32GO:0005200: structural constituent of cytoskeleton8.79E-03
33GO:0015250: water channel activity9.54E-03
34GO:0004871: signal transducer activity1.18E-02
35GO:0030145: manganese ion binding1.27E-02
36GO:0003924: GTPase activity1.39E-02
37GO:0008422: beta-glucosidase activity1.45E-02
38GO:0009055: electron carrier activity1.50E-02
39GO:0051287: NAD binding1.86E-02
40GO:0045735: nutrient reservoir activity2.26E-02
41GO:0004650: polygalacturonase activity2.42E-02
42GO:0022857: transmembrane transporter activity2.47E-02
43GO:0000166: nucleotide binding2.48E-02
44GO:0016746: transferase activity, transferring acyl groups2.64E-02
45GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.63E-02
46GO:0005516: calmodulin binding3.72E-02
47GO:0005525: GTP binding4.06E-02
RankGO TermAdjusted P value
1GO:0048046: apoplast4.66E-11
2GO:0005576: extracellular region6.80E-10
3GO:0005618: cell wall1.55E-06
4GO:0009505: plant-type cell wall1.63E-06
5GO:0009346: citrate lyase complex2.69E-06
6GO:0031225: anchored component of membrane3.77E-06
7GO:0010319: stromule3.28E-05
8GO:0005886: plasma membrane6.46E-05
9GO:0046658: anchored component of plasma membrane9.56E-05
10GO:0009506: plasmodesma1.70E-04
11GO:0030093: chloroplast photosystem I1.74E-04
12GO:0009528: plastid inner membrane2.93E-04
13GO:0009527: plastid outer membrane5.65E-04
14GO:0009707: chloroplast outer membrane9.46E-04
15GO:0009534: chloroplast thylakoid1.10E-03
16GO:0045298: tubulin complex1.80E-03
17GO:0016020: membrane3.60E-03
18GO:0005875: microtubule associated complex3.71E-03
19GO:0009532: plastid stroma4.54E-03
20GO:0031410: cytoplasmic vesicle4.83E-03
21GO:0015629: actin cytoskeleton5.13E-03
22GO:0009579: thylakoid5.81E-03
23GO:0009522: photosystem I6.70E-03
24GO:0009535: chloroplast thylakoid membrane8.18E-03
25GO:0009570: chloroplast stroma1.32E-02
26GO:0005856: cytoskeleton1.77E-02
27GO:0009941: chloroplast envelope2.49E-02
28GO:0005773: vacuole2.97E-02
29GO:0009543: chloroplast thylakoid lumen3.03E-02
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Gene type



Gene DE type