GO Enrichment Analysis of Co-expressed Genes with
AT1G76100
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 2 | GO:2000121: regulation of removal of superoxide radicals | 0.00E+00 |
| 3 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 4 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 5 | GO:0015979: photosynthesis | 3.80E-24 |
| 6 | GO:0009735: response to cytokinin | 3.45E-11 |
| 7 | GO:0042254: ribosome biogenesis | 3.24E-08 |
| 8 | GO:0006412: translation | 6.73E-08 |
| 9 | GO:0015976: carbon utilization | 8.07E-08 |
| 10 | GO:0015995: chlorophyll biosynthetic process | 4.02E-07 |
| 11 | GO:0009773: photosynthetic electron transport in photosystem I | 7.91E-06 |
| 12 | GO:2000122: negative regulation of stomatal complex development | 1.97E-05 |
| 13 | GO:0010037: response to carbon dioxide | 1.97E-05 |
| 14 | GO:0042742: defense response to bacterium | 3.37E-05 |
| 15 | GO:0010019: chloroplast-nucleus signaling pathway | 6.70E-05 |
| 16 | GO:0009409: response to cold | 8.65E-05 |
| 17 | GO:0009658: chloroplast organization | 1.02E-04 |
| 18 | GO:0009657: plastid organization | 1.44E-04 |
| 19 | GO:0032544: plastid translation | 1.44E-04 |
| 20 | GO:0043489: RNA stabilization | 1.58E-04 |
| 21 | GO:0071588: hydrogen peroxide mediated signaling pathway | 1.58E-04 |
| 22 | GO:0010206: photosystem II repair | 1.77E-04 |
| 23 | GO:0006949: syncytium formation | 2.50E-04 |
| 24 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.91E-04 |
| 25 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 3.60E-04 |
| 26 | GO:0009725: response to hormone | 3.82E-04 |
| 27 | GO:0019253: reductive pentose-phosphate cycle | 4.31E-04 |
| 28 | GO:0010207: photosystem II assembly | 4.31E-04 |
| 29 | GO:0006636: unsaturated fatty acid biosynthetic process | 5.37E-04 |
| 30 | GO:0006000: fructose metabolic process | 5.89E-04 |
| 31 | GO:0015714: phosphoenolpyruvate transport | 5.89E-04 |
| 32 | GO:0009768: photosynthesis, light harvesting in photosystem I | 6.55E-04 |
| 33 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 8.43E-04 |
| 34 | GO:0055070: copper ion homeostasis | 8.43E-04 |
| 35 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 8.43E-04 |
| 36 | GO:0051513: regulation of monopolar cell growth | 8.43E-04 |
| 37 | GO:0071484: cellular response to light intensity | 8.43E-04 |
| 38 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 8.52E-04 |
| 39 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.12E-03 |
| 40 | GO:0045727: positive regulation of translation | 1.12E-03 |
| 41 | GO:0015713: phosphoglycerate transport | 1.12E-03 |
| 42 | GO:0006546: glycine catabolic process | 1.12E-03 |
| 43 | GO:0034052: positive regulation of plant-type hypersensitive response | 1.41E-03 |
| 44 | GO:0032543: mitochondrial translation | 1.41E-03 |
| 45 | GO:0031365: N-terminal protein amino acid modification | 1.41E-03 |
| 46 | GO:0009828: plant-type cell wall loosening | 1.71E-03 |
| 47 | GO:0042549: photosystem II stabilization | 1.74E-03 |
| 48 | GO:0017148: negative regulation of translation | 2.09E-03 |
| 49 | GO:0010189: vitamin E biosynthetic process | 2.09E-03 |
| 50 | GO:0009772: photosynthetic electron transport in photosystem II | 2.45E-03 |
| 51 | GO:0010196: nonphotochemical quenching | 2.45E-03 |
| 52 | GO:0050829: defense response to Gram-negative bacterium | 2.45E-03 |
| 53 | GO:0018298: protein-chromophore linkage | 2.64E-03 |
| 54 | GO:0042255: ribosome assembly | 2.84E-03 |
| 55 | GO:0046620: regulation of organ growth | 2.84E-03 |
| 56 | GO:0043068: positive regulation of programmed cell death | 2.84E-03 |
| 57 | GO:0009631: cold acclimation | 3.04E-03 |
| 58 | GO:0010119: regulation of stomatal movement | 3.04E-03 |
| 59 | GO:0006002: fructose 6-phosphate metabolic process | 3.25E-03 |
| 60 | GO:0009245: lipid A biosynthetic process | 3.67E-03 |
| 61 | GO:0000373: Group II intron splicing | 3.67E-03 |
| 62 | GO:0009826: unidimensional cell growth | 3.83E-03 |
| 63 | GO:0010205: photoinhibition | 4.12E-03 |
| 64 | GO:0010114: response to red light | 4.29E-03 |
| 65 | GO:0009744: response to sucrose | 4.29E-03 |
| 66 | GO:0009299: mRNA transcription | 4.58E-03 |
| 67 | GO:0019684: photosynthesis, light reaction | 5.05E-03 |
| 68 | GO:0009089: lysine biosynthetic process via diaminopimelate | 5.05E-03 |
| 69 | GO:0043085: positive regulation of catalytic activity | 5.05E-03 |
| 70 | GO:0000272: polysaccharide catabolic process | 5.05E-03 |
| 71 | GO:0009750: response to fructose | 5.05E-03 |
| 72 | GO:0010015: root morphogenesis | 5.05E-03 |
| 73 | GO:0009664: plant-type cell wall organization | 5.38E-03 |
| 74 | GO:0006006: glucose metabolic process | 6.06E-03 |
| 75 | GO:0006094: gluconeogenesis | 6.06E-03 |
| 76 | GO:0005986: sucrose biosynthetic process | 6.06E-03 |
| 77 | GO:0006417: regulation of translation | 6.39E-03 |
| 78 | GO:0046688: response to copper ion | 7.13E-03 |
| 79 | GO:0019762: glucosinolate catabolic process | 7.69E-03 |
| 80 | GO:0009740: gibberellic acid mediated signaling pathway | 7.73E-03 |
| 81 | GO:0042545: cell wall modification | 7.97E-03 |
| 82 | GO:0000027: ribosomal large subunit assembly | 8.27E-03 |
| 83 | GO:0045333: cellular respiration | 8.27E-03 |
| 84 | GO:0006396: RNA processing | 8.46E-03 |
| 85 | GO:0006397: mRNA processing | 9.14E-03 |
| 86 | GO:0061077: chaperone-mediated protein folding | 9.46E-03 |
| 87 | GO:0031408: oxylipin biosynthetic process | 9.46E-03 |
| 88 | GO:0048511: rhythmic process | 9.46E-03 |
| 89 | GO:0009814: defense response, incompatible interaction | 1.01E-02 |
| 90 | GO:0009411: response to UV | 1.07E-02 |
| 91 | GO:0006284: base-excision repair | 1.14E-02 |
| 92 | GO:0042631: cellular response to water deprivation | 1.27E-02 |
| 93 | GO:0042335: cuticle development | 1.27E-02 |
| 94 | GO:0000413: protein peptidyl-prolyl isomerization | 1.27E-02 |
| 95 | GO:0006633: fatty acid biosynthetic process | 1.30E-02 |
| 96 | GO:0015986: ATP synthesis coupled proton transport | 1.41E-02 |
| 97 | GO:0042752: regulation of circadian rhythm | 1.41E-02 |
| 98 | GO:0045490: pectin catabolic process | 1.42E-02 |
| 99 | GO:0009749: response to glucose | 1.48E-02 |
| 100 | GO:0019252: starch biosynthetic process | 1.48E-02 |
| 101 | GO:0000302: response to reactive oxygen species | 1.56E-02 |
| 102 | GO:0032502: developmental process | 1.63E-02 |
| 103 | GO:0055114: oxidation-reduction process | 1.73E-02 |
| 104 | GO:0009416: response to light stimulus | 1.79E-02 |
| 105 | GO:0010027: thylakoid membrane organization | 2.02E-02 |
| 106 | GO:0006810: transport | 2.17E-02 |
| 107 | GO:0009627: systemic acquired resistance | 2.19E-02 |
| 108 | GO:0009817: defense response to fungus, incompatible interaction | 2.44E-02 |
| 109 | GO:0010218: response to far red light | 2.62E-02 |
| 110 | GO:0080167: response to karrikin | 2.74E-02 |
| 111 | GO:0045087: innate immune response | 2.89E-02 |
| 112 | GO:0016051: carbohydrate biosynthetic process | 2.89E-02 |
| 113 | GO:0009637: response to blue light | 2.89E-02 |
| 114 | GO:0034599: cellular response to oxidative stress | 2.98E-02 |
| 115 | GO:0030001: metal ion transport | 3.17E-02 |
| 116 | GO:0009926: auxin polar transport | 3.46E-02 |
| 117 | GO:0009793: embryo development ending in seed dormancy | 4.22E-02 |
| 118 | GO:0006364: rRNA processing | 4.28E-02 |
| 119 | GO:0006096: glycolytic process | 4.82E-02 |
| 120 | GO:0009733: response to auxin | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 2 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 3 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 4 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 5 | GO:0019843: rRNA binding | 3.97E-11 |
| 6 | GO:0003735: structural constituent of ribosome | 1.15E-10 |
| 7 | GO:0004089: carbonate dehydratase activity | 1.26E-05 |
| 8 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 1.44E-04 |
| 9 | GO:0015121: phosphoenolpyruvate:phosphate antiporter activity | 1.58E-04 |
| 10 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 1.58E-04 |
| 11 | GO:0046906: tetrapyrrole binding | 1.58E-04 |
| 12 | GO:0016168: chlorophyll binding | 2.04E-04 |
| 13 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 3.60E-04 |
| 14 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 3.60E-04 |
| 15 | GO:0008967: phosphoglycolate phosphatase activity | 3.60E-04 |
| 16 | GO:0016630: protochlorophyllide reductase activity | 3.60E-04 |
| 17 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 3.60E-04 |
| 18 | GO:0042389: omega-3 fatty acid desaturase activity | 3.60E-04 |
| 19 | GO:0010297: heteropolysaccharide binding | 3.60E-04 |
| 20 | GO:0043425: bHLH transcription factor binding | 3.60E-04 |
| 21 | GO:0031409: pigment binding | 5.37E-04 |
| 22 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 5.89E-04 |
| 23 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 5.89E-04 |
| 24 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 6.28E-04 |
| 25 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 8.43E-04 |
| 26 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 8.43E-04 |
| 27 | GO:0003727: single-stranded RNA binding | 9.22E-04 |
| 28 | GO:0015120: phosphoglycerate transmembrane transporter activity | 1.12E-03 |
| 29 | GO:0003959: NADPH dehydrogenase activity | 1.41E-03 |
| 30 | GO:0016651: oxidoreductase activity, acting on NAD(P)H | 1.41E-03 |
| 31 | GO:0008725: DNA-3-methyladenine glycosylase activity | 1.41E-03 |
| 32 | GO:0004130: cytochrome-c peroxidase activity | 1.74E-03 |
| 33 | GO:0042578: phosphoric ester hydrolase activity | 1.74E-03 |
| 34 | GO:0031177: phosphopantetheine binding | 1.74E-03 |
| 35 | GO:0016688: L-ascorbate peroxidase activity | 1.74E-03 |
| 36 | GO:0000035: acyl binding | 2.09E-03 |
| 37 | GO:0051920: peroxiredoxin activity | 2.09E-03 |
| 38 | GO:0008235: metalloexopeptidase activity | 2.45E-03 |
| 39 | GO:0019899: enzyme binding | 2.45E-03 |
| 40 | GO:0005509: calcium ion binding | 2.82E-03 |
| 41 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 2.84E-03 |
| 42 | GO:0016209: antioxidant activity | 2.84E-03 |
| 43 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.64E-03 |
| 44 | GO:0004177: aminopeptidase activity | 5.05E-03 |
| 45 | GO:0031072: heat shock protein binding | 6.06E-03 |
| 46 | GO:0045330: aspartyl esterase activity | 6.39E-03 |
| 47 | GO:0008266: poly(U) RNA binding | 6.59E-03 |
| 48 | GO:0008146: sulfotransferase activity | 7.13E-03 |
| 49 | GO:0004650: polygalacturonase activity | 7.50E-03 |
| 50 | GO:0030599: pectinesterase activity | 7.73E-03 |
| 51 | GO:0005528: FK506 binding | 8.27E-03 |
| 52 | GO:0003756: protein disulfide isomerase activity | 1.14E-02 |
| 53 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.34E-02 |
| 54 | GO:0050662: coenzyme binding | 1.41E-02 |
| 55 | GO:0048038: quinone binding | 1.56E-02 |
| 56 | GO:0003723: RNA binding | 1.80E-02 |
| 57 | GO:0016597: amino acid binding | 1.94E-02 |
| 58 | GO:0102483: scopolin beta-glucosidase activity | 2.27E-02 |
| 59 | GO:0003993: acid phosphatase activity | 2.98E-02 |
| 60 | GO:0008422: beta-glucosidase activity | 3.08E-02 |
| 61 | GO:0050661: NADP binding | 3.17E-02 |
| 62 | GO:0043621: protein self-association | 3.66E-02 |
| 63 | GO:0051287: NAD binding | 3.96E-02 |
| 64 | GO:0003690: double-stranded DNA binding | 4.38E-02 |
| 65 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 2 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 3 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 4 | GO:0009507: chloroplast | 4.90E-48 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 7.66E-43 |
| 6 | GO:0009579: thylakoid | 3.14E-34 |
| 7 | GO:0009941: chloroplast envelope | 1.19E-32 |
| 8 | GO:0009534: chloroplast thylakoid | 1.78E-24 |
| 9 | GO:0009570: chloroplast stroma | 6.39E-24 |
| 10 | GO:0009543: chloroplast thylakoid lumen | 9.31E-18 |
| 11 | GO:0005840: ribosome | 1.33E-12 |
| 12 | GO:0031977: thylakoid lumen | 2.33E-11 |
| 13 | GO:0010287: plastoglobule | 1.08E-09 |
| 14 | GO:0030095: chloroplast photosystem II | 2.44E-09 |
| 15 | GO:0009654: photosystem II oxygen evolving complex | 8.82E-09 |
| 16 | GO:0009538: photosystem I reaction center | 1.03E-08 |
| 17 | GO:0031969: chloroplast membrane | 7.09E-08 |
| 18 | GO:0019898: extrinsic component of membrane | 7.44E-08 |
| 19 | GO:0010319: stromule | 1.84E-07 |
| 20 | GO:0000311: plastid large ribosomal subunit | 1.01E-05 |
| 21 | GO:0015935: small ribosomal subunit | 3.72E-05 |
| 22 | GO:0009522: photosystem I | 9.04E-05 |
| 23 | GO:0009783: photosystem II antenna complex | 1.58E-04 |
| 24 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.77E-04 |
| 25 | GO:0016020: membrane | 2.15E-04 |
| 26 | GO:0042170: plastid membrane | 3.60E-04 |
| 27 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 3.60E-04 |
| 28 | GO:0042646: plastid nucleoid | 8.43E-04 |
| 29 | GO:0005960: glycine cleavage complex | 8.43E-04 |
| 30 | GO:0009706: chloroplast inner membrane | 1.16E-03 |
| 31 | GO:0055035: plastid thylakoid membrane | 1.41E-03 |
| 32 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 1.74E-03 |
| 33 | GO:0030529: intracellular ribonucleoprotein complex | 2.03E-03 |
| 34 | GO:0016363: nuclear matrix | 2.09E-03 |
| 35 | GO:0015934: large ribosomal subunit | 3.04E-03 |
| 36 | GO:0048046: apoplast | 3.52E-03 |
| 37 | GO:0030076: light-harvesting complex | 7.13E-03 |
| 38 | GO:0042651: thylakoid membrane | 8.86E-03 |
| 39 | GO:0009523: photosystem II | 1.48E-02 |
| 40 | GO:0071944: cell periphery | 1.71E-02 |
| 41 | GO:0009505: plant-type cell wall | 1.72E-02 |
| 42 | GO:0009295: nucleoid | 1.86E-02 |
| 43 | GO:0005618: cell wall | 3.47E-02 |
| 44 | GO:0005747: mitochondrial respiratory chain complex I | 4.93E-02 |