GO Enrichment Analysis of Co-expressed Genes with
AT1G74670
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:2000121: regulation of removal of superoxide radicals | 0.00E+00 |
| 2 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 3 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 4 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 5 | GO:0015979: photosynthesis | 1.65E-14 |
| 6 | GO:0010207: photosystem II assembly | 1.61E-05 |
| 7 | GO:0015976: carbon utilization | 2.01E-05 |
| 8 | GO:0009735: response to cytokinin | 2.27E-05 |
| 9 | GO:0042549: photosystem II stabilization | 4.89E-05 |
| 10 | GO:0009409: response to cold | 9.15E-05 |
| 11 | GO:0009658: chloroplast organization | 1.07E-04 |
| 12 | GO:0042254: ribosome biogenesis | 1.11E-04 |
| 13 | GO:0043489: RNA stabilization | 1.60E-04 |
| 14 | GO:0071370: cellular response to gibberellin stimulus | 1.60E-04 |
| 15 | GO:0010206: photosystem II repair | 1.80E-04 |
| 16 | GO:0015995: chlorophyll biosynthetic process | 2.43E-04 |
| 17 | GO:0006949: syncytium formation | 2.55E-04 |
| 18 | GO:0009773: photosynthetic electron transport in photosystem I | 2.97E-04 |
| 19 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.97E-04 |
| 20 | GO:0006412: translation | 3.11E-04 |
| 21 | GO:0006521: regulation of cellular amino acid metabolic process | 3.65E-04 |
| 22 | GO:0006006: glucose metabolic process | 3.89E-04 |
| 23 | GO:0009725: response to hormone | 3.89E-04 |
| 24 | GO:0010114: response to red light | 5.29E-04 |
| 25 | GO:0006636: unsaturated fatty acid biosynthetic process | 5.47E-04 |
| 26 | GO:0009768: photosynthesis, light harvesting in photosystem I | 6.66E-04 |
| 27 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 8.53E-04 |
| 28 | GO:0055070: copper ion homeostasis | 8.53E-04 |
| 29 | GO:2001141: regulation of RNA biosynthetic process | 8.53E-04 |
| 30 | GO:1902476: chloride transmembrane transport | 8.53E-04 |
| 31 | GO:0051513: regulation of monopolar cell growth | 8.53E-04 |
| 32 | GO:0071484: cellular response to light intensity | 8.53E-04 |
| 33 | GO:0080170: hydrogen peroxide transmembrane transport | 8.53E-04 |
| 34 | GO:0042742: defense response to bacterium | 8.68E-04 |
| 35 | GO:2000122: negative regulation of stomatal complex development | 1.13E-03 |
| 36 | GO:0030104: water homeostasis | 1.13E-03 |
| 37 | GO:0010037: response to carbon dioxide | 1.13E-03 |
| 38 | GO:0045727: positive regulation of translation | 1.13E-03 |
| 39 | GO:0015994: chlorophyll metabolic process | 1.13E-03 |
| 40 | GO:0034052: positive regulation of plant-type hypersensitive response | 1.43E-03 |
| 41 | GO:0032543: mitochondrial translation | 1.43E-03 |
| 42 | GO:0009828: plant-type cell wall loosening | 1.74E-03 |
| 43 | GO:1902456: regulation of stomatal opening | 1.76E-03 |
| 44 | GO:0017148: negative regulation of translation | 2.11E-03 |
| 45 | GO:0010019: chloroplast-nucleus signaling pathway | 2.11E-03 |
| 46 | GO:0045490: pectin catabolic process | 2.37E-03 |
| 47 | GO:0010196: nonphotochemical quenching | 2.48E-03 |
| 48 | GO:0050829: defense response to Gram-negative bacterium | 2.48E-03 |
| 49 | GO:0006821: chloride transport | 2.48E-03 |
| 50 | GO:0009772: photosynthetic electron transport in photosystem II | 2.48E-03 |
| 51 | GO:0018298: protein-chromophore linkage | 2.69E-03 |
| 52 | GO:0042255: ribosome assembly | 2.88E-03 |
| 53 | GO:0046620: regulation of organ growth | 2.88E-03 |
| 54 | GO:0030091: protein repair | 2.88E-03 |
| 55 | GO:0043068: positive regulation of programmed cell death | 2.88E-03 |
| 56 | GO:0010119: regulation of stomatal movement | 3.10E-03 |
| 57 | GO:0009657: plastid organization | 3.29E-03 |
| 58 | GO:0032544: plastid translation | 3.29E-03 |
| 59 | GO:0071482: cellular response to light stimulus | 3.29E-03 |
| 60 | GO:0009051: pentose-phosphate shunt, oxidative branch | 3.72E-03 |
| 61 | GO:0055114: oxidation-reduction process | 3.88E-03 |
| 62 | GO:0009826: unidimensional cell growth | 3.92E-03 |
| 63 | GO:0009733: response to auxin | 4.11E-03 |
| 64 | GO:0010205: photoinhibition | 4.17E-03 |
| 65 | GO:0009299: mRNA transcription | 4.64E-03 |
| 66 | GO:0019684: photosynthesis, light reaction | 5.12E-03 |
| 67 | GO:0009089: lysine biosynthetic process via diaminopimelate | 5.12E-03 |
| 68 | GO:0043085: positive regulation of catalytic activity | 5.12E-03 |
| 69 | GO:0006352: DNA-templated transcription, initiation | 5.12E-03 |
| 70 | GO:0000272: polysaccharide catabolic process | 5.12E-03 |
| 71 | GO:0010015: root morphogenesis | 5.12E-03 |
| 72 | GO:0009698: phenylpropanoid metabolic process | 5.12E-03 |
| 73 | GO:0009664: plant-type cell wall organization | 5.48E-03 |
| 74 | GO:0015706: nitrate transport | 5.62E-03 |
| 75 | GO:0019253: reductive pentose-phosphate cycle | 6.67E-03 |
| 76 | GO:0010167: response to nitrate | 7.22E-03 |
| 77 | GO:0005985: sucrose metabolic process | 7.22E-03 |
| 78 | GO:0046688: response to copper ion | 7.22E-03 |
| 79 | GO:0019762: glucosinolate catabolic process | 7.79E-03 |
| 80 | GO:0042545: cell wall modification | 8.12E-03 |
| 81 | GO:0045333: cellular respiration | 8.38E-03 |
| 82 | GO:0005992: trehalose biosynthetic process | 8.38E-03 |
| 83 | GO:0006396: RNA processing | 8.62E-03 |
| 84 | GO:0031408: oxylipin biosynthetic process | 9.59E-03 |
| 85 | GO:0048511: rhythmic process | 9.59E-03 |
| 86 | GO:0061077: chaperone-mediated protein folding | 9.59E-03 |
| 87 | GO:0009814: defense response, incompatible interaction | 1.02E-02 |
| 88 | GO:0019748: secondary metabolic process | 1.02E-02 |
| 89 | GO:0009411: response to UV | 1.09E-02 |
| 90 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.09E-02 |
| 91 | GO:0006284: base-excision repair | 1.15E-02 |
| 92 | GO:0080022: primary root development | 1.29E-02 |
| 93 | GO:0034220: ion transmembrane transport | 1.29E-02 |
| 94 | GO:0000413: protein peptidyl-prolyl isomerization | 1.29E-02 |
| 95 | GO:0010087: phloem or xylem histogenesis | 1.29E-02 |
| 96 | GO:0042631: cellular response to water deprivation | 1.29E-02 |
| 97 | GO:0040008: regulation of growth | 1.38E-02 |
| 98 | GO:0015986: ATP synthesis coupled proton transport | 1.43E-02 |
| 99 | GO:0042752: regulation of circadian rhythm | 1.43E-02 |
| 100 | GO:0000302: response to reactive oxygen species | 1.58E-02 |
| 101 | GO:0032502: developmental process | 1.65E-02 |
| 102 | GO:0010027: thylakoid membrane organization | 2.05E-02 |
| 103 | GO:0042128: nitrate assimilation | 2.22E-02 |
| 104 | GO:0006810: transport | 2.23E-02 |
| 105 | GO:0010411: xyloglucan metabolic process | 2.30E-02 |
| 106 | GO:0009817: defense response to fungus, incompatible interaction | 2.47E-02 |
| 107 | GO:0009407: toxin catabolic process | 2.65E-02 |
| 108 | GO:0010218: response to far red light | 2.65E-02 |
| 109 | GO:0009631: cold acclimation | 2.74E-02 |
| 110 | GO:0045087: innate immune response | 2.93E-02 |
| 111 | GO:0009637: response to blue light | 2.93E-02 |
| 112 | GO:0034599: cellular response to oxidative stress | 3.02E-02 |
| 113 | GO:0009926: auxin polar transport | 3.51E-02 |
| 114 | GO:0009744: response to sucrose | 3.51E-02 |
| 115 | GO:0042546: cell wall biogenesis | 3.61E-02 |
| 116 | GO:0009636: response to toxic substance | 3.81E-02 |
| 117 | GO:0006397: mRNA processing | 4.28E-02 |
| 118 | GO:0009793: embryo development ending in seed dormancy | 4.33E-02 |
| 119 | GO:0006364: rRNA processing | 4.34E-02 |
| 120 | GO:0006979: response to oxidative stress | 4.46E-02 |
| 121 | GO:0008152: metabolic process | 4.52E-02 |
| 122 | GO:0006417: regulation of translation | 4.66E-02 |
| 123 | GO:0006096: glycolytic process | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 2 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 3 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 4 | GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity | 0.00E+00 |
| 5 | GO:0019843: rRNA binding | 1.46E-09 |
| 6 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 1.25E-06 |
| 7 | GO:0003735: structural constituent of ribosome | 9.89E-06 |
| 8 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 6.08E-05 |
| 9 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 1.47E-04 |
| 10 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 1.60E-04 |
| 11 | GO:0009671: nitrate:proton symporter activity | 1.60E-04 |
| 12 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 1.60E-04 |
| 13 | GO:0046906: tetrapyrrole binding | 1.60E-04 |
| 14 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 3.65E-04 |
| 15 | GO:0008967: phosphoglycolate phosphatase activity | 3.65E-04 |
| 16 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 3.65E-04 |
| 17 | GO:0047746: chlorophyllase activity | 3.65E-04 |
| 18 | GO:0042389: omega-3 fatty acid desaturase activity | 3.65E-04 |
| 19 | GO:0010297: heteropolysaccharide binding | 3.65E-04 |
| 20 | GO:0043425: bHLH transcription factor binding | 3.65E-04 |
| 21 | GO:0004089: carbonate dehydratase activity | 3.89E-04 |
| 22 | GO:0031409: pigment binding | 5.47E-04 |
| 23 | GO:0051537: 2 iron, 2 sulfur cluster binding | 5.84E-04 |
| 24 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 5.97E-04 |
| 25 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 5.97E-04 |
| 26 | GO:0005528: FK506 binding | 6.05E-04 |
| 27 | GO:0003727: single-stranded RNA binding | 9.39E-04 |
| 28 | GO:0005253: anion channel activity | 1.13E-03 |
| 29 | GO:0001053: plastid sigma factor activity | 1.13E-03 |
| 30 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 1.13E-03 |
| 31 | GO:0016987: sigma factor activity | 1.13E-03 |
| 32 | GO:0016651: oxidoreductase activity, acting on NAD(P)H | 1.43E-03 |
| 33 | GO:0008725: DNA-3-methyladenine glycosylase activity | 1.43E-03 |
| 34 | GO:0004130: cytochrome-c peroxidase activity | 1.76E-03 |
| 35 | GO:0005247: voltage-gated chloride channel activity | 1.76E-03 |
| 36 | GO:0016597: amino acid binding | 1.95E-03 |
| 37 | GO:0004602: glutathione peroxidase activity | 2.11E-03 |
| 38 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 2.11E-03 |
| 39 | GO:0016168: chlorophyll binding | 2.18E-03 |
| 40 | GO:0019899: enzyme binding | 2.48E-03 |
| 41 | GO:0004564: beta-fructofuranosidase activity | 2.88E-03 |
| 42 | GO:0050661: NADP binding | 3.86E-03 |
| 43 | GO:0015112: nitrate transmembrane transporter activity | 4.17E-03 |
| 44 | GO:0004575: sucrose alpha-glucosidase activity | 4.17E-03 |
| 45 | GO:0004185: serine-type carboxypeptidase activity | 4.37E-03 |
| 46 | GO:0004805: trehalose-phosphatase activity | 4.64E-03 |
| 47 | GO:0031072: heat shock protein binding | 6.14E-03 |
| 48 | GO:0045330: aspartyl esterase activity | 6.51E-03 |
| 49 | GO:0008266: poly(U) RNA binding | 6.67E-03 |
| 50 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 7.18E-03 |
| 51 | GO:0008146: sulfotransferase activity | 7.22E-03 |
| 52 | GO:0030599: pectinesterase activity | 7.88E-03 |
| 53 | GO:0030570: pectate lyase activity | 1.09E-02 |
| 54 | GO:0005509: calcium ion binding | 1.11E-02 |
| 55 | GO:0003756: protein disulfide isomerase activity | 1.15E-02 |
| 56 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.36E-02 |
| 57 | GO:0050662: coenzyme binding | 1.43E-02 |
| 58 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.58E-02 |
| 59 | GO:0048038: quinone binding | 1.58E-02 |
| 60 | GO:0015250: water channel activity | 2.05E-02 |
| 61 | GO:0016788: hydrolase activity, acting on ester bonds | 2.29E-02 |
| 62 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.30E-02 |
| 63 | GO:0102483: scopolin beta-glucosidase activity | 2.30E-02 |
| 64 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 2.39E-02 |
| 65 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.60E-02 |
| 66 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 3.02E-02 |
| 67 | GO:0003993: acid phosphatase activity | 3.02E-02 |
| 68 | GO:0008422: beta-glucosidase activity | 3.12E-02 |
| 69 | GO:0004364: glutathione transferase activity | 3.41E-02 |
| 70 | GO:0043621: protein self-association | 3.71E-02 |
| 71 | GO:0051287: NAD binding | 4.02E-02 |
| 72 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.34E-02 |
| 73 | GO:0009055: electron carrier activity | 4.40E-02 |
| 74 | GO:0003690: double-stranded DNA binding | 4.44E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 2 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 3 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 4 | GO:0009507: chloroplast | 6.55E-29 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 1.17E-27 |
| 6 | GO:0009941: chloroplast envelope | 7.28E-21 |
| 7 | GO:0009534: chloroplast thylakoid | 6.89E-20 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 1.05E-17 |
| 9 | GO:0009579: thylakoid | 4.58E-17 |
| 10 | GO:0009570: chloroplast stroma | 8.51E-16 |
| 11 | GO:0031977: thylakoid lumen | 2.52E-11 |
| 12 | GO:0030095: chloroplast photosystem II | 2.57E-09 |
| 13 | GO:0005840: ribosome | 6.10E-07 |
| 14 | GO:0009654: photosystem II oxygen evolving complex | 6.95E-07 |
| 15 | GO:0010287: plastoglobule | 8.87E-07 |
| 16 | GO:0019898: extrinsic component of membrane | 3.73E-06 |
| 17 | GO:0010319: stromule | 7.56E-06 |
| 18 | GO:0031969: chloroplast membrane | 1.81E-05 |
| 19 | GO:0009538: photosystem I reaction center | 1.18E-04 |
| 20 | GO:0009783: photosystem II antenna complex | 1.60E-04 |
| 21 | GO:0043674: columella | 1.60E-04 |
| 22 | GO:0000311: plastid large ribosomal subunit | 3.42E-04 |
| 23 | GO:0042170: plastid membrane | 3.65E-04 |
| 24 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 3.65E-04 |
| 25 | GO:0015935: small ribosomal subunit | 7.30E-04 |
| 26 | GO:0005775: vacuolar lumen | 8.53E-04 |
| 27 | GO:0042646: plastid nucleoid | 8.53E-04 |
| 28 | GO:0009706: chloroplast inner membrane | 1.19E-03 |
| 29 | GO:0009522: photosystem I | 1.26E-03 |
| 30 | GO:0009523: photosystem II | 1.35E-03 |
| 31 | GO:0009505: plant-type cell wall | 1.35E-03 |
| 32 | GO:0055035: plastid thylakoid membrane | 1.43E-03 |
| 33 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 1.76E-03 |
| 34 | GO:0034707: chloride channel complex | 1.76E-03 |
| 35 | GO:0016363: nuclear matrix | 2.11E-03 |
| 36 | GO:0042807: central vacuole | 2.48E-03 |
| 37 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.72E-03 |
| 38 | GO:0005618: cell wall | 4.43E-03 |
| 39 | GO:0030076: light-harvesting complex | 7.22E-03 |
| 40 | GO:0042651: thylakoid membrane | 8.97E-03 |
| 41 | GO:0048046: apoplast | 1.09E-02 |
| 42 | GO:0016020: membrane | 1.09E-02 |
| 43 | GO:0009705: plant-type vacuole membrane | 1.45E-02 |
| 44 | GO:0071944: cell periphery | 1.73E-02 |
| 45 | GO:0030529: intracellular ribonucleoprotein complex | 2.05E-02 |
| 46 | GO:0000325: plant-type vacuole | 2.74E-02 |
| 47 | GO:0015934: large ribosomal subunit | 2.74E-02 |
| 48 | GO:0031902: late endosome membrane | 3.31E-02 |
| 49 | GO:0005747: mitochondrial respiratory chain complex I | 4.99E-02 |