GO Enrichment Analysis of Co-expressed Genes with
AT1G74560
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000478: endonucleolytic cleavage involved in rRNA processing | 0.00E+00 |
| 2 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 3 | GO:0080056: petal vascular tissue pattern formation | 0.00E+00 |
| 4 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 5 | GO:0031564: transcription antitermination | 0.00E+00 |
| 6 | GO:0080057: sepal vascular tissue pattern formation | 0.00E+00 |
| 7 | GO:0006364: rRNA processing | 9.36E-06 |
| 8 | GO:0000494: box C/D snoRNA 3'-end processing | 1.57E-05 |
| 9 | GO:1990258: histone glutamine methylation | 1.57E-05 |
| 10 | GO:0000027: ribosomal large subunit assembly | 2.31E-05 |
| 11 | GO:0045041: protein import into mitochondrial intermembrane space | 4.12E-05 |
| 12 | GO:0006954: inflammatory response | 7.34E-05 |
| 13 | GO:1902626: assembly of large subunit precursor of preribosome | 7.34E-05 |
| 14 | GO:0045039: protein import into mitochondrial inner membrane | 7.34E-05 |
| 15 | GO:0042254: ribosome biogenesis | 8.10E-05 |
| 16 | GO:0009113: purine nucleobase biosynthetic process | 1.11E-04 |
| 17 | GO:0070301: cellular response to hydrogen peroxide | 1.11E-04 |
| 18 | GO:0006241: CTP biosynthetic process | 1.11E-04 |
| 19 | GO:0006165: nucleoside diphosphate phosphorylation | 1.11E-04 |
| 20 | GO:0006228: UTP biosynthetic process | 1.11E-04 |
| 21 | GO:0006164: purine nucleotide biosynthetic process | 1.11E-04 |
| 22 | GO:0006183: GTP biosynthetic process | 1.53E-04 |
| 23 | GO:0031167: rRNA methylation | 1.98E-04 |
| 24 | GO:0046686: response to cadmium ion | 2.30E-04 |
| 25 | GO:0006458: 'de novo' protein folding | 2.97E-04 |
| 26 | GO:0042026: protein refolding | 2.97E-04 |
| 27 | GO:0042255: ribosome assembly | 4.04E-04 |
| 28 | GO:0001510: RNA methylation | 4.60E-04 |
| 29 | GO:0006189: 'de novo' IMP biosynthetic process | 5.18E-04 |
| 30 | GO:0006626: protein targeting to mitochondrion | 8.30E-04 |
| 31 | GO:0010588: cotyledon vascular tissue pattern formation | 8.30E-04 |
| 32 | GO:0048467: gynoecium development | 8.97E-04 |
| 33 | GO:0061077: chaperone-mediated protein folding | 1.25E-03 |
| 34 | GO:0007005: mitochondrion organization | 1.33E-03 |
| 35 | GO:0006412: translation | 1.47E-03 |
| 36 | GO:0008033: tRNA processing | 1.65E-03 |
| 37 | GO:0000413: protein peptidyl-prolyl isomerization | 1.65E-03 |
| 38 | GO:0010305: leaf vascular tissue pattern formation | 1.73E-03 |
| 39 | GO:0016049: cell growth | 2.94E-03 |
| 40 | GO:0048527: lateral root development | 3.36E-03 |
| 41 | GO:0010043: response to zinc ion | 3.36E-03 |
| 42 | GO:0009631: cold acclimation | 3.36E-03 |
| 43 | GO:0009744: response to sucrose | 4.25E-03 |
| 44 | GO:0009651: response to salt stress | 4.40E-03 |
| 45 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 4.84E-03 |
| 46 | GO:0009846: pollen germination | 4.96E-03 |
| 47 | GO:0048367: shoot system development | 5.98E-03 |
| 48 | GO:0009845: seed germination | 8.21E-03 |
| 49 | GO:0009790: embryo development | 8.65E-03 |
| 50 | GO:0006633: fatty acid biosynthetic process | 9.10E-03 |
| 51 | GO:0006413: translational initiation | 9.26E-03 |
| 52 | GO:0006970: response to osmotic stress | 1.39E-02 |
| 53 | GO:0009723: response to ethylene | 1.47E-02 |
| 54 | GO:0048366: leaf development | 1.49E-02 |
| 55 | GO:0048364: root development | 2.09E-02 |
| 56 | GO:0009734: auxin-activated signaling pathway | 2.59E-02 |
| 57 | GO:0009735: response to cytokinin | 2.87E-02 |
| 58 | GO:0051301: cell division | 3.25E-02 |
| 59 | GO:0006457: protein folding | 3.68E-02 |
| 60 | GO:0006511: ubiquitin-dependent protein catabolic process | 3.81E-02 |
| 61 | GO:0006414: translational elongation | 4.07E-02 |
| 62 | GO:0009414: response to water deprivation | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0001072: transcription antitermination factor activity, RNA binding | 0.00E+00 |
| 2 | GO:0102132: 3-oxo-pimeloyl-[acp] methyl ester reductase activity | 0.00E+00 |
| 3 | GO:0016018: cyclosporin A binding | 0.00E+00 |
| 4 | GO:0004637: phosphoribosylamine-glycine ligase activity | 0.00E+00 |
| 5 | GO:0004316: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity | 0.00E+00 |
| 6 | GO:0003723: RNA binding | 6.49E-07 |
| 7 | GO:1990259: histone-glutamine methyltransferase activity | 1.57E-05 |
| 8 | GO:0005507: copper ion binding | 5.67E-05 |
| 9 | GO:0008649: rRNA methyltransferase activity | 7.34E-05 |
| 10 | GO:0004550: nucleoside diphosphate kinase activity | 1.11E-04 |
| 11 | GO:0003697: single-stranded DNA binding | 1.77E-04 |
| 12 | GO:0031369: translation initiation factor binding | 2.47E-04 |
| 13 | GO:0030515: snoRNA binding | 3.49E-04 |
| 14 | GO:0001055: RNA polymerase II activity | 5.76E-04 |
| 15 | GO:0001054: RNA polymerase I activity | 7.00E-04 |
| 16 | GO:0044183: protein binding involved in protein folding | 7.00E-04 |
| 17 | GO:0001056: RNA polymerase III activity | 7.65E-04 |
| 18 | GO:0003735: structural constituent of ribosome | 2.27E-03 |
| 19 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.05E-03 |
| 20 | GO:0050897: cobalt ion binding | 3.36E-03 |
| 21 | GO:0005524: ATP binding | 3.52E-03 |
| 22 | GO:0003746: translation elongation factor activity | 3.58E-03 |
| 23 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.72E-03 |
| 24 | GO:0051287: NAD binding | 4.84E-03 |
| 25 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 5.21E-03 |
| 26 | GO:0003690: double-stranded DNA binding | 5.34E-03 |
| 27 | GO:0051082: unfolded protein binding | 6.64E-03 |
| 28 | GO:0008026: ATP-dependent helicase activity | 6.92E-03 |
| 29 | GO:0008565: protein transporter activity | 8.80E-03 |
| 30 | GO:0003729: mRNA binding | 1.07E-02 |
| 31 | GO:0003743: translation initiation factor activity | 1.09E-02 |
| 32 | GO:0008233: peptidase activity | 1.52E-02 |
| 33 | GO:0003924: GTPase activity | 2.03E-02 |
| 34 | GO:0003676: nucleic acid binding | 2.97E-02 |
| 35 | GO:0005525: GTP binding | 4.36E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 2 | GO:0005730: nucleolus | 5.01E-08 |
| 3 | GO:0005747: mitochondrial respiratory chain complex I | 1.31E-05 |
| 4 | GO:0071541: eukaryotic translation initiation factor 3 complex, eIF3m | 1.57E-05 |
| 5 | GO:0005774: vacuolar membrane | 1.15E-04 |
| 6 | GO:0031428: box C/D snoRNP complex | 2.47E-04 |
| 7 | GO:0005739: mitochondrion | 2.59E-04 |
| 8 | GO:0005742: mitochondrial outer membrane translocase complex | 4.60E-04 |
| 9 | GO:0005736: DNA-directed RNA polymerase I complex | 5.18E-04 |
| 10 | GO:0005666: DNA-directed RNA polymerase III complex | 5.76E-04 |
| 11 | GO:0015030: Cajal body | 5.76E-04 |
| 12 | GO:0000418: DNA-directed RNA polymerase IV complex | 6.38E-04 |
| 13 | GO:0005852: eukaryotic translation initiation factor 3 complex | 7.00E-04 |
| 14 | GO:0032040: small-subunit processome | 7.65E-04 |
| 15 | GO:0005665: DNA-directed RNA polymerase II, core complex | 7.65E-04 |
| 16 | GO:0009508: plastid chromosome | 8.30E-04 |
| 17 | GO:0022627: cytosolic small ribosomal subunit | 9.78E-04 |
| 18 | GO:0005758: mitochondrial intermembrane space | 1.10E-03 |
| 19 | GO:0005773: vacuole | 1.51E-03 |
| 20 | GO:0005829: cytosol | 1.63E-03 |
| 21 | GO:0009295: nucleoid | 2.36E-03 |
| 22 | GO:0015934: large ribosomal subunit | 3.36E-03 |
| 23 | GO:0005635: nuclear envelope | 5.46E-03 |
| 24 | GO:0009536: plastid | 8.81E-03 |
| 25 | GO:0009570: chloroplast stroma | 1.03E-02 |
| 26 | GO:0009507: chloroplast | 1.16E-02 |
| 27 | GO:0016020: membrane | 1.56E-02 |
| 28 | GO:0022625: cytosolic large ribosomal subunit | 1.60E-02 |
| 29 | GO:0005743: mitochondrial inner membrane | 1.93E-02 |
| 30 | GO:0005618: cell wall | 2.86E-02 |
| 31 | GO:0005777: peroxisome | 3.38E-02 |
| 32 | GO:0009941: chloroplast envelope | 3.39E-02 |
| 33 | GO:0005622: intracellular | 4.61E-02 |