co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G73920

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045176: apical protein localization	0.00E+00
2	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
3	GO:0000372: Group I intron splicing	0.00E+00
4	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
5	GO:0090706: specification of plant organ position	0.00E+00
6	GO:0048507: meristem development	5.55E-06
7	GO:0006000: fructose metabolic process	6.66E-06
8	GO:0006094: gluconeogenesis	2.05E-05
9	GO:0010305: leaf vascular tissue pattern formation	1.25E-04
10	GO:0015808: L-alanine transport	1.95E-04
11	GO:0010480: microsporocyte differentiation	1.95E-04
12	GO:0031338: regulation of vesicle fusion	1.95E-04
13	GO:0000481: maturation of 5S rRNA	1.95E-04
14	GO:0042547: cell wall modification involved in multidimensional cell growth	1.95E-04
15	GO:0034628: 'de novo' NAD biosynthetic process from aspartate	1.95E-04
16	GO:0043609: regulation of carbon utilization	1.95E-04
17	GO:0010028: xanthophyll cycle	1.95E-04
18	GO:0034337: RNA folding	1.95E-04
19	GO:0010450: inflorescence meristem growth	1.95E-04
20	GO:0015969: guanosine tetraphosphate metabolic process	1.95E-04
21	GO:0010493: Lewis a epitope biosynthetic process	1.95E-04
22	GO:0006002: fructose 6-phosphate metabolic process	1.98E-04
23	GO:0000373: Group II intron splicing	2.40E-04
24	GO:0009416: response to light stimulus	3.67E-04
25	GO:0046373: L-arabinose metabolic process	4.38E-04
26	GO:0042325: regulation of phosphorylation	4.38E-04
27	GO:0098712: L-glutamate import across plasma membrane	4.38E-04
28	GO:0016122: xanthophyll metabolic process	4.38E-04
29	GO:0030388: fructose 1,6-bisphosphate metabolic process	4.38E-04
30	GO:0015804: neutral amino acid transport	4.38E-04
31	GO:0055129: L-proline biosynthetic process	4.38E-04
32	GO:0008152: metabolic process	6.93E-04
33	GO:0006013: mannose metabolic process	7.14E-04
34	GO:0006518: peptide metabolic process	7.14E-04
35	GO:0071230: cellular response to amino acid stimulus	7.14E-04
36	GO:0043617: cellular response to sucrose starvation	7.14E-04
37	GO:0051176: positive regulation of sulfur metabolic process	7.14E-04
38	GO:0045493: xylan catabolic process	7.14E-04
39	GO:0090630: activation of GTPase activity	7.14E-04
40	GO:0045165: cell fate commitment	7.14E-04
41	GO:2000082: regulation of L-ascorbic acid biosynthetic process	7.14E-04
42	GO:0005975: carbohydrate metabolic process	1.01E-03
43	GO:1901332: negative regulation of lateral root development	1.02E-03
44	GO:0080170: hydrogen peroxide transmembrane transport	1.02E-03
45	GO:0080092: regulation of pollen tube growth	1.04E-03
46	GO:0045727: positive regulation of translation	1.35E-03
47	GO:0015994: chlorophyll metabolic process	1.35E-03
48	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.60E-03
49	GO:1902183: regulation of shoot apical meristem development	1.72E-03
50	GO:0009435: NAD biosynthetic process	1.72E-03
51	GO:0010438: cellular response to sulfur starvation	1.72E-03
52	GO:0010158: abaxial cell fate specification	1.72E-03
53	GO:0000741: karyogamy	2.12E-03
54	GO:0009759: indole glucosinolate biosynthetic process	2.12E-03
55	GO:0006561: proline biosynthetic process	2.12E-03
56	GO:0048827: phyllome development	2.12E-03
57	GO:0042549: photosystem II stabilization	2.12E-03
58	GO:0000470: maturation of LSU-rRNA	2.12E-03
59	GO:0009942: longitudinal axis specification	2.54E-03
60	GO:1900057: positive regulation of leaf senescence	3.00E-03
61	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	3.00E-03
62	GO:0043090: amino acid import	3.00E-03
63	GO:0048437: floral organ development	3.00E-03
64	GO:0032508: DNA duplex unwinding	3.47E-03
65	GO:0010492: maintenance of shoot apical meristem identity	3.47E-03
66	GO:0034968: histone lysine methylation	3.47E-03
67	GO:0032544: plastid translation	3.97E-03
68	GO:0010093: specification of floral organ identity	3.97E-03
69	GO:0009932: cell tip growth	3.97E-03
70	GO:0090305: nucleic acid phosphodiester bond hydrolysis	4.49E-03
71	GO:0010206: photosystem II repair	4.49E-03
72	GO:2000024: regulation of leaf development	4.49E-03
73	GO:0009060: aerobic respiration	4.49E-03
74	GO:0006098: pentose-phosphate shunt	4.49E-03
75	GO:0016571: histone methylation	5.04E-03
76	GO:0009750: response to fructose	6.20E-03
77	GO:0048229: gametophyte development	6.20E-03
78	GO:0046856: phosphatidylinositol dephosphorylation	6.20E-03
79	GO:0006816: calcium ion transport	6.20E-03
80	GO:0007165: signal transduction	6.39E-03
81	GO:0009737: response to abscisic acid	6.67E-03
82	GO:0005983: starch catabolic process	6.81E-03
83	GO:0002213: defense response to insect	6.81E-03
84	GO:0010229: inflorescence development	7.44E-03
85	GO:0018107: peptidyl-threonine phosphorylation	7.44E-03
86	GO:0009718: anthocyanin-containing compound biosynthetic process	7.44E-03
87	GO:0010075: regulation of meristem growth	7.44E-03
88	GO:0009767: photosynthetic electron transport chain	7.44E-03
89	GO:0005986: sucrose biosynthetic process	7.44E-03
90	GO:0006364: rRNA processing	7.75E-03
91	GO:0009933: meristem structural organization	8.10E-03
92	GO:0010540: basipetal auxin transport	8.10E-03
93	GO:0009934: regulation of meristem structural organization	8.10E-03
94	GO:0010030: positive regulation of seed germination	8.77E-03
95	GO:0010053: root epidermal cell differentiation	8.77E-03
96	GO:0042343: indole glucosinolate metabolic process	8.77E-03
97	GO:0006096: glycolytic process	9.17E-03
98	GO:0006833: water transport	9.46E-03
99	GO:0000162: tryptophan biosynthetic process	9.46E-03
100	GO:0009944: polarity specification of adaxial/abaxial axis	1.02E-02
101	GO:0006289: nucleotide-excision repair	1.02E-02
102	GO:2000377: regulation of reactive oxygen species metabolic process	1.02E-02
103	GO:0006874: cellular calcium ion homeostasis	1.09E-02
104	GO:0098542: defense response to other organism	1.17E-02
105	GO:0061077: chaperone-mediated protein folding	1.17E-02
106	GO:0009814: defense response, incompatible interaction	1.24E-02
107	GO:0016226: iron-sulfur cluster assembly	1.24E-02
108	GO:0009686: gibberellin biosynthetic process	1.32E-02
109	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.48E-02
110	GO:0034220: ion transmembrane transport	1.57E-02
111	GO:0010051: xylem and phloem pattern formation	1.57E-02
112	GO:0048653: anther development	1.57E-02
113	GO:0042631: cellular response to water deprivation	1.57E-02
114	GO:0009790: embryo development	1.62E-02
115	GO:0010154: fruit development	1.65E-02
116	GO:0006662: glycerol ether metabolic process	1.65E-02
117	GO:0010197: polar nucleus fusion	1.65E-02
118	GO:0010268: brassinosteroid homeostasis	1.65E-02
119	GO:0071472: cellular response to salt stress	1.65E-02
120	GO:0009646: response to absence of light	1.74E-02
121	GO:0048825: cotyledon development	1.83E-02
122	GO:0016132: brassinosteroid biosynthetic process	1.92E-02
123	GO:0009734: auxin-activated signaling pathway	1.95E-02
124	GO:0009630: gravitropism	2.01E-02
125	GO:0071281: cellular response to iron ion	2.11E-02
126	GO:0030163: protein catabolic process	2.11E-02
127	GO:0016125: sterol metabolic process	2.20E-02
128	GO:0009908: flower development	2.30E-02
129	GO:0071805: potassium ion transmembrane transport	2.30E-02
130	GO:0009911: positive regulation of flower development	2.50E-02
131	GO:0001666: response to hypoxia	2.50E-02
132	GO:0016126: sterol biosynthetic process	2.50E-02
133	GO:0015995: chlorophyll biosynthetic process	2.80E-02
134	GO:0016311: dephosphorylation	2.91E-02
135	GO:0045893: positive regulation of transcription, DNA-templated	3.09E-02
136	GO:0010311: lateral root formation	3.12E-02
137	GO:0006499: N-terminal protein myristoylation	3.23E-02
138	GO:0009910: negative regulation of flower development	3.34E-02
139	GO:0009723: response to ethylene	3.43E-02
140	GO:0045087: innate immune response	3.57E-02
141	GO:0009853: photorespiration	3.57E-02
142	GO:0034599: cellular response to oxidative stress	3.68E-02
143	GO:0055114: oxidation-reduction process	3.88E-02
144	GO:0046777: protein autophosphorylation	3.93E-02
145	GO:0006631: fatty acid metabolic process	4.03E-02
146	GO:0009640: photomorphogenesis	4.27E-02
147	GO:0009744: response to sucrose	4.27E-02
148	GO:0045454: cell redox homeostasis	4.39E-02
149	GO:0006855: drug transmembrane transport	4.77E-02

Rank	GO Term	Adjusted P value
1	GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity	0.00E+00
2	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
3	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
4	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
5	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
6	GO:0047513: 1,2-alpha-L-fucosidase activity	0.00E+00
7	GO:0046422: violaxanthin de-epoxidase activity	0.00E+00
8	GO:0008987: quinolinate synthetase A activity	0.00E+00
9	GO:0005528: FK506 binding	1.02E-06
10	GO:0004565: beta-galactosidase activity	2.05E-05
11	GO:0004332: fructose-bisphosphate aldolase activity	6.73E-05
12	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.01E-04
13	GO:0051777: ent-kaurenoate oxidase activity	1.95E-04
14	GO:0004856: xylulokinase activity	1.95E-04
15	GO:0050139: nicotinate-N-glucosyltransferase activity	1.95E-04
16	GO:0015194: L-serine transmembrane transporter activity	1.95E-04
17	GO:0004349: glutamate 5-kinase activity	1.95E-04
18	GO:0046920: alpha-(1->3)-fucosyltransferase activity	1.95E-04
19	GO:0008066: glutamate receptor activity	1.95E-04
20	GO:0004350: glutamate-5-semialdehyde dehydrogenase activity	1.95E-04
21	GO:0005089: Rho guanyl-nucleotide exchange factor activity	3.91E-04
22	GO:0005096: GTPase activator activity	4.27E-04
23	GO:0008728: GTP diphosphokinase activity	4.38E-04
24	GO:0015180: L-alanine transmembrane transporter activity	4.38E-04
25	GO:0016868: intramolecular transferase activity, phosphotransferases	4.38E-04
26	GO:0005094: Rho GDP-dissociation inhibitor activity	4.38E-04
27	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	4.38E-04
28	GO:0004148: dihydrolipoyl dehydrogenase activity	7.14E-04
29	GO:0015193: L-proline transmembrane transporter activity	7.14E-04
30	GO:0016805: dipeptidase activity	7.14E-04
31	GO:0010429: methyl-CpNpN binding	7.14E-04
32	GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity	7.14E-04
33	GO:0004180: carboxypeptidase activity	7.14E-04
34	GO:0010428: methyl-CpNpG binding	7.14E-04
35	GO:0015186: L-glutamine transmembrane transporter activity	1.02E-03
36	GO:0019201: nucleotide kinase activity	1.02E-03
37	GO:0015175: neutral amino acid transmembrane transporter activity	1.02E-03
38	GO:0070628: proteasome binding	1.35E-03
39	GO:0009044: xylan 1,4-beta-xylosidase activity	1.35E-03
40	GO:0046556: alpha-L-arabinofuranosidase activity	1.35E-03
41	GO:0008453: alanine-glyoxylate transaminase activity	1.35E-03
42	GO:0005313: L-glutamate transmembrane transporter activity	1.35E-03
43	GO:0004506: squalene monooxygenase activity	1.35E-03
44	GO:0016301: kinase activity	1.41E-03
45	GO:0016773: phosphotransferase activity, alcohol group as acceptor	1.72E-03
46	GO:0017137: Rab GTPase binding	1.72E-03
47	GO:0031593: polyubiquitin binding	2.12E-03
48	GO:0042578: phosphoric ester hydrolase activity	2.12E-03
49	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	2.12E-03
50	GO:2001070: starch binding	2.12E-03
51	GO:0004017: adenylate kinase activity	2.54E-03
52	GO:0004559: alpha-mannosidase activity	2.54E-03
53	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	2.54E-03
54	GO:0043022: ribosome binding	3.47E-03
55	GO:0008417: fucosyltransferase activity	4.49E-03
56	GO:0071949: FAD binding	4.49E-03
57	GO:0008047: enzyme activator activity	5.61E-03
58	GO:0008327: methyl-CpG binding	6.20E-03
59	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	6.81E-03
60	GO:0008081: phosphoric diester hydrolase activity	7.44E-03
61	GO:0005262: calcium channel activity	7.44E-03
62	GO:0019888: protein phosphatase regulator activity	7.44E-03
63	GO:0008266: poly(U) RNA binding	8.10E-03
64	GO:0005217: intracellular ligand-gated ion channel activity	8.77E-03
65	GO:0004970: ionotropic glutamate receptor activity	8.77E-03
66	GO:0004190: aspartic-type endopeptidase activity	8.77E-03
67	GO:0043130: ubiquitin binding	1.02E-02
68	GO:0004871: signal transducer activity	1.03E-02
69	GO:0015079: potassium ion transmembrane transporter activity	1.09E-02
70	GO:0033612: receptor serine/threonine kinase binding	1.17E-02
71	GO:0016779: nucleotidyltransferase activity	1.24E-02
72	GO:0004674: protein serine/threonine kinase activity	1.29E-02
73	GO:0030570: pectate lyase activity	1.32E-02
74	GO:0019843: rRNA binding	1.39E-02
75	GO:0018024: histone-lysine N-methyltransferase activity	1.48E-02
76	GO:0047134: protein-disulfide reductase activity	1.48E-02
77	GO:0016829: lyase activity	1.50E-02
78	GO:0050662: coenzyme binding	1.74E-02
79	GO:0004791: thioredoxin-disulfide reductase activity	1.74E-02
80	GO:0004518: nuclease activity	2.01E-02
81	GO:0016787: hydrolase activity	2.04E-02
82	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.11E-02
83	GO:0003684: damaged DNA binding	2.20E-02
84	GO:0008483: transaminase activity	2.30E-02
85	GO:0042802: identical protein binding	2.44E-02
86	GO:0015250: water channel activity	2.50E-02
87	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.80E-02
88	GO:0008168: methyltransferase activity	2.86E-02
89	GO:0008236: serine-type peptidase activity	2.91E-02
90	GO:0015238: drug transmembrane transporter activity	3.12E-02
91	GO:0004222: metalloendopeptidase activity	3.23E-02
92	GO:0050897: cobalt ion binding	3.34E-02
93	GO:0005524: ATP binding	3.41E-02
94	GO:0050660: flavin adenine dinucleotide binding	3.43E-02
95	GO:0003746: translation elongation factor activity	3.57E-02
96	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.80E-02
97	GO:0051539: 4 iron, 4 sulfur cluster binding	3.92E-02
98	GO:0042393: histone binding	3.92E-02
99	GO:0051537: 2 iron, 2 sulfur cluster binding	4.52E-02
100	GO:0035091: phosphatidylinositol binding	4.52E-02
101	GO:0015293: symporter activity	4.64E-02

Rank	GO Term	Adjusted P value
1	GO:0009543: chloroplast thylakoid lumen	4.52E-09
2	GO:0009507: chloroplast	1.31E-08
3	GO:0009570: chloroplast stroma	3.23E-07
4	GO:0009534: chloroplast thylakoid	1.83E-06
5	GO:0009535: chloroplast thylakoid membrane	4.75E-05
6	GO:0009344: nitrite reductase complex [NAD(P)H]	1.95E-04
7	GO:0005886: plasma membrane	4.02E-04
8	GO:0030095: chloroplast photosystem II	5.74E-04
9	GO:0009505: plant-type cell wall	6.63E-04
10	GO:0048046: apoplast	7.90E-04
11	GO:0009531: secondary cell wall	1.02E-03
12	GO:0030660: Golgi-associated vesicle membrane	1.35E-03
13	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	1.35E-03
14	GO:0005773: vacuole	2.09E-03
15	GO:0009579: thylakoid	2.18E-03
16	GO:0030529: intracellular ribonucleoprotein complex	2.71E-03
17	GO:0009533: chloroplast stromal thylakoid	3.00E-03
18	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	3.47E-03
19	GO:0009941: chloroplast envelope	4.30E-03
20	GO:0008180: COP9 signalosome	4.49E-03
21	GO:0031977: thylakoid lumen	5.31E-03
22	GO:0016324: apical plasma membrane	5.61E-03
23	GO:0000159: protein phosphatase type 2A complex	6.20E-03
24	GO:0005765: lysosomal membrane	6.20E-03
25	GO:0032040: small-subunit processome	6.81E-03
26	GO:0005578: proteinaceous extracellular matrix	7.44E-03
27	GO:0009654: photosystem II oxygen evolving complex	1.09E-02
28	GO:0009532: plastid stroma	1.17E-02
29	GO:0000775: chromosome, centromeric region	1.24E-02
30	GO:0005770: late endosome	1.65E-02
31	GO:0005759: mitochondrial matrix	1.75E-02
32	GO:0019898: extrinsic component of membrane	1.83E-02
33	GO:0032580: Golgi cisterna membrane	2.20E-02
34	GO:0046658: anchored component of plasma membrane	2.54E-02
35	GO:0019005: SCF ubiquitin ligase complex	3.02E-02
36	GO:0005777: peroxisome	3.09E-02
37	GO:0009506: plasmodesma	4.46E-02