GO Enrichment Analysis of Co-expressed Genes with
AT1G73060
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 2 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 3 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 4 | GO:0060416: response to growth hormone | 0.00E+00 |
| 5 | GO:0000372: Group I intron splicing | 0.00E+00 |
| 6 | GO:0099131: ATP hydrolysis coupled ion transmembrane transport | 0.00E+00 |
| 7 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 8 | GO:0006429: leucyl-tRNA aminoacylation | 0.00E+00 |
| 9 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 10 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.77E-06 |
| 11 | GO:0032544: plastid translation | 3.84E-06 |
| 12 | GO:0006412: translation | 6.00E-05 |
| 13 | GO:0000476: maturation of 4.5S rRNA | 1.93E-04 |
| 14 | GO:0000967: rRNA 5'-end processing | 1.93E-04 |
| 15 | GO:0070509: calcium ion import | 1.93E-04 |
| 16 | GO:0007263: nitric oxide mediated signal transduction | 1.93E-04 |
| 17 | GO:0043266: regulation of potassium ion transport | 1.93E-04 |
| 18 | GO:0006723: cuticle hydrocarbon biosynthetic process | 1.93E-04 |
| 19 | GO:0042547: cell wall modification involved in multidimensional cell growth | 1.93E-04 |
| 20 | GO:2000021: regulation of ion homeostasis | 1.93E-04 |
| 21 | GO:0010206: photosystem II repair | 2.36E-04 |
| 22 | GO:0034755: iron ion transmembrane transport | 4.33E-04 |
| 23 | GO:0016560: protein import into peroxisome matrix, docking | 4.33E-04 |
| 24 | GO:0080148: negative regulation of response to water deprivation | 4.33E-04 |
| 25 | GO:0010270: photosystem II oxygen evolving complex assembly | 4.33E-04 |
| 26 | GO:0034470: ncRNA processing | 4.33E-04 |
| 27 | GO:0048527: lateral root development | 4.74E-04 |
| 28 | GO:0009767: photosynthetic electron transport chain | 5.01E-04 |
| 29 | GO:0043447: alkane biosynthetic process | 7.06E-04 |
| 30 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 7.06E-04 |
| 31 | GO:0006954: inflammatory response | 7.06E-04 |
| 32 | GO:0006518: peptide metabolic process | 7.06E-04 |
| 33 | GO:2001295: malonyl-CoA biosynthetic process | 7.06E-04 |
| 34 | GO:0005977: glycogen metabolic process | 7.06E-04 |
| 35 | GO:0006011: UDP-glucose metabolic process | 7.06E-04 |
| 36 | GO:0006418: tRNA aminoacylation for protein translation | 8.55E-04 |
| 37 | GO:0016556: mRNA modification | 1.01E-03 |
| 38 | GO:0055070: copper ion homeostasis | 1.01E-03 |
| 39 | GO:2001141: regulation of RNA biosynthetic process | 1.01E-03 |
| 40 | GO:0006515: misfolded or incompletely synthesized protein catabolic process | 1.01E-03 |
| 41 | GO:0042254: ribosome biogenesis | 1.11E-03 |
| 42 | GO:0006749: glutathione metabolic process | 1.34E-03 |
| 43 | GO:0006808: regulation of nitrogen utilization | 1.34E-03 |
| 44 | GO:0032543: mitochondrial translation | 1.70E-03 |
| 45 | GO:0006564: L-serine biosynthetic process | 1.70E-03 |
| 46 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.70E-03 |
| 47 | GO:0035434: copper ion transmembrane transport | 1.70E-03 |
| 48 | GO:0006828: manganese ion transport | 2.10E-03 |
| 49 | GO:0010190: cytochrome b6f complex assembly | 2.10E-03 |
| 50 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 2.10E-03 |
| 51 | GO:0010942: positive regulation of cell death | 2.10E-03 |
| 52 | GO:0006354: DNA-templated transcription, elongation | 2.10E-03 |
| 53 | GO:0006751: glutathione catabolic process | 2.10E-03 |
| 54 | GO:0000470: maturation of LSU-rRNA | 2.10E-03 |
| 55 | GO:0016554: cytidine to uridine editing | 2.10E-03 |
| 56 | GO:0009793: embryo development ending in seed dormancy | 2.44E-03 |
| 57 | GO:0042026: protein refolding | 2.52E-03 |
| 58 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.52E-03 |
| 59 | GO:0006458: 'de novo' protein folding | 2.52E-03 |
| 60 | GO:0006629: lipid metabolic process | 2.69E-03 |
| 61 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 2.96E-03 |
| 62 | GO:0006821: chloride transport | 2.96E-03 |
| 63 | GO:0051510: regulation of unidimensional cell growth | 2.96E-03 |
| 64 | GO:0010078: maintenance of root meristem identity | 3.43E-03 |
| 65 | GO:0009704: de-etiolation | 3.43E-03 |
| 66 | GO:0052543: callose deposition in cell wall | 3.43E-03 |
| 67 | GO:0008610: lipid biosynthetic process | 3.43E-03 |
| 68 | GO:0018298: protein-chromophore linkage | 3.47E-03 |
| 69 | GO:0043562: cellular response to nitrogen levels | 3.93E-03 |
| 70 | GO:0071482: cellular response to light stimulus | 3.93E-03 |
| 71 | GO:0009821: alkaloid biosynthetic process | 4.44E-03 |
| 72 | GO:0000373: Group II intron splicing | 4.44E-03 |
| 73 | GO:1900865: chloroplast RNA modification | 4.99E-03 |
| 74 | GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | 4.99E-03 |
| 75 | GO:0006779: porphyrin-containing compound biosynthetic process | 4.99E-03 |
| 76 | GO:0006782: protoporphyrinogen IX biosynthetic process | 5.55E-03 |
| 77 | GO:0006535: cysteine biosynthetic process from serine | 5.55E-03 |
| 78 | GO:0009073: aromatic amino acid family biosynthetic process | 6.13E-03 |
| 79 | GO:0006879: cellular iron ion homeostasis | 6.13E-03 |
| 80 | GO:0006352: DNA-templated transcription, initiation | 6.13E-03 |
| 81 | GO:0016485: protein processing | 6.13E-03 |
| 82 | GO:0009684: indoleacetic acid biosynthetic process | 6.13E-03 |
| 83 | GO:0006816: calcium ion transport | 6.13E-03 |
| 84 | GO:0010588: cotyledon vascular tissue pattern formation | 7.36E-03 |
| 85 | GO:0006364: rRNA processing | 7.63E-03 |
| 86 | GO:0010207: photosystem II assembly | 8.01E-03 |
| 87 | GO:0048768: root hair cell tip growth | 8.01E-03 |
| 88 | GO:0048467: gynoecium development | 8.01E-03 |
| 89 | GO:0006096: glycolytic process | 9.03E-03 |
| 90 | GO:0010025: wax biosynthetic process | 9.35E-03 |
| 91 | GO:0019344: cysteine biosynthetic process | 1.01E-02 |
| 92 | GO:0016575: histone deacetylation | 1.08E-02 |
| 93 | GO:0019915: lipid storage | 1.15E-02 |
| 94 | GO:0061077: chaperone-mediated protein folding | 1.15E-02 |
| 95 | GO:0035428: hexose transmembrane transport | 1.23E-02 |
| 96 | GO:0009814: defense response, incompatible interaction | 1.23E-02 |
| 97 | GO:0016226: iron-sulfur cluster assembly | 1.23E-02 |
| 98 | GO:0040007: growth | 1.31E-02 |
| 99 | GO:0042335: cuticle development | 1.55E-02 |
| 100 | GO:0042391: regulation of membrane potential | 1.55E-02 |
| 101 | GO:0080022: primary root development | 1.55E-02 |
| 102 | GO:0010087: phloem or xylem histogenesis | 1.55E-02 |
| 103 | GO:0009958: positive gravitropism | 1.63E-02 |
| 104 | GO:0046323: glucose import | 1.63E-02 |
| 105 | GO:0009741: response to brassinosteroid | 1.63E-02 |
| 106 | GO:0006633: fatty acid biosynthetic process | 1.72E-02 |
| 107 | GO:0009791: post-embryonic development | 1.81E-02 |
| 108 | GO:0048825: cotyledon development | 1.81E-02 |
| 109 | GO:0009851: auxin biosynthetic process | 1.81E-02 |
| 110 | GO:0007623: circadian rhythm | 1.89E-02 |
| 111 | GO:0016032: viral process | 1.99E-02 |
| 112 | GO:0048235: pollen sperm cell differentiation | 1.99E-02 |
| 113 | GO:0030163: protein catabolic process | 2.08E-02 |
| 114 | GO:0009567: double fertilization forming a zygote and endosperm | 2.18E-02 |
| 115 | GO:0009735: response to cytokinin | 2.28E-02 |
| 116 | GO:0015995: chlorophyll biosynthetic process | 2.77E-02 |
| 117 | GO:0009658: chloroplast organization | 2.92E-02 |
| 118 | GO:0048481: plant ovule development | 2.98E-02 |
| 119 | GO:0009407: toxin catabolic process | 3.20E-02 |
| 120 | GO:0009637: response to blue light | 3.53E-02 |
| 121 | GO:0006839: mitochondrial transport | 3.87E-02 |
| 122 | GO:0030001: metal ion transport | 3.87E-02 |
| 123 | GO:0015979: photosynthesis | 4.12E-02 |
| 124 | GO:0010114: response to red light | 4.23E-02 |
| 125 | GO:0051707: response to other organism | 4.23E-02 |
| 126 | GO:0009644: response to high light intensity | 4.47E-02 |
| 127 | GO:0009636: response to toxic substance | 4.59E-02 |
| 128 | GO:0006855: drug transmembrane transport | 4.71E-02 |
| 129 | GO:0042538: hyperosmotic salinity response | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 2 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 3 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 4 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 5 | GO:0004823: leucine-tRNA ligase activity | 0.00E+00 |
| 6 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 7 | GO:0005048: signal sequence binding | 0.00E+00 |
| 8 | GO:0005222: intracellular cAMP activated cation channel activity | 0.00E+00 |
| 9 | GO:0047513: 1,2-alpha-L-fucosidase activity | 0.00E+00 |
| 10 | GO:0019843: rRNA binding | 4.23E-09 |
| 11 | GO:0003735: structural constituent of ribosome | 4.67E-06 |
| 12 | GO:0002161: aminoacyl-tRNA editing activity | 6.53E-06 |
| 13 | GO:0005221: intracellular cyclic nucleotide activated cation channel activity | 1.93E-04 |
| 14 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 1.93E-04 |
| 15 | GO:0008236: serine-type peptidase activity | 3.67E-04 |
| 16 | GO:0080097: L-tryptophan:pyruvate aminotransferase activity | 4.33E-04 |
| 17 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 4.33E-04 |
| 18 | GO:0003839: gamma-glutamylcyclotransferase activity | 4.33E-04 |
| 19 | GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity | 4.33E-04 |
| 20 | GO:0004617: phosphoglycerate dehydrogenase activity | 4.33E-04 |
| 21 | GO:0003913: DNA photolyase activity | 7.06E-04 |
| 22 | GO:0004075: biotin carboxylase activity | 7.06E-04 |
| 23 | GO:0030267: glyoxylate reductase (NADP) activity | 7.06E-04 |
| 24 | GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity | 7.06E-04 |
| 25 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 7.06E-04 |
| 26 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 7.06E-04 |
| 27 | GO:0016531: copper chaperone activity | 7.06E-04 |
| 28 | GO:0019829: cation-transporting ATPase activity | 7.06E-04 |
| 29 | GO:0017150: tRNA dihydrouridine synthase activity | 7.06E-04 |
| 30 | GO:0005528: FK506 binding | 7.77E-04 |
| 31 | GO:0048487: beta-tubulin binding | 1.01E-03 |
| 32 | GO:0008097: 5S rRNA binding | 1.01E-03 |
| 33 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 1.01E-03 |
| 34 | GO:0004812: aminoacyl-tRNA ligase activity | 1.30E-03 |
| 35 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 1.34E-03 |
| 36 | GO:0001053: plastid sigma factor activity | 1.34E-03 |
| 37 | GO:0016836: hydro-lyase activity | 1.34E-03 |
| 38 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 1.34E-03 |
| 39 | GO:0016987: sigma factor activity | 1.34E-03 |
| 40 | GO:0003989: acetyl-CoA carboxylase activity | 1.70E-03 |
| 41 | GO:0008374: O-acyltransferase activity | 1.70E-03 |
| 42 | GO:0016846: carbon-sulfur lyase activity | 1.70E-03 |
| 43 | GO:0042578: phosphoric ester hydrolase activity | 2.10E-03 |
| 44 | GO:0005247: voltage-gated chloride channel activity | 2.10E-03 |
| 45 | GO:0004252: serine-type endopeptidase activity | 2.50E-03 |
| 46 | GO:0005261: cation channel activity | 2.52E-03 |
| 47 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.52E-03 |
| 48 | GO:0005242: inward rectifier potassium channel activity | 2.52E-03 |
| 49 | GO:0004124: cysteine synthase activity | 2.52E-03 |
| 50 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.52E-03 |
| 51 | GO:0009881: photoreceptor activity | 2.96E-03 |
| 52 | GO:0004033: aldo-keto reductase (NADP) activity | 3.43E-03 |
| 53 | GO:0043022: ribosome binding | 3.43E-03 |
| 54 | GO:0008312: 7S RNA binding | 3.43E-03 |
| 55 | GO:0005375: copper ion transmembrane transporter activity | 3.93E-03 |
| 56 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 3.93E-03 |
| 57 | GO:0005384: manganese ion transmembrane transporter activity | 4.99E-03 |
| 58 | GO:0047617: acyl-CoA hydrolase activity | 4.99E-03 |
| 59 | GO:0016844: strictosidine synthase activity | 4.99E-03 |
| 60 | GO:0005381: iron ion transmembrane transporter activity | 4.99E-03 |
| 61 | GO:0016788: hydrolase activity, acting on ester bonds | 5.87E-03 |
| 62 | GO:0044183: protein binding involved in protein folding | 6.13E-03 |
| 63 | GO:0016787: hydrolase activity | 6.54E-03 |
| 64 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 6.60E-03 |
| 65 | GO:0000049: tRNA binding | 6.73E-03 |
| 66 | GO:0004565: beta-galactosidase activity | 7.36E-03 |
| 67 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 7.36E-03 |
| 68 | GO:0004022: alcohol dehydrogenase (NAD) activity | 7.36E-03 |
| 69 | GO:0015095: magnesium ion transmembrane transporter activity | 7.36E-03 |
| 70 | GO:0005262: calcium channel activity | 7.36E-03 |
| 71 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 7.63E-03 |
| 72 | GO:0008266: poly(U) RNA binding | 8.01E-03 |
| 73 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 8.01E-03 |
| 74 | GO:0030552: cAMP binding | 8.67E-03 |
| 75 | GO:0030553: cGMP binding | 8.67E-03 |
| 76 | GO:0051536: iron-sulfur cluster binding | 1.01E-02 |
| 77 | GO:0004407: histone deacetylase activity | 1.01E-02 |
| 78 | GO:0005216: ion channel activity | 1.08E-02 |
| 79 | GO:0004176: ATP-dependent peptidase activity | 1.15E-02 |
| 80 | GO:0030570: pectate lyase activity | 1.31E-02 |
| 81 | GO:0022891: substrate-specific transmembrane transporter activity | 1.31E-02 |
| 82 | GO:0003723: RNA binding | 1.34E-02 |
| 83 | GO:0004519: endonuclease activity | 1.38E-02 |
| 84 | GO:0030551: cyclic nucleotide binding | 1.55E-02 |
| 85 | GO:0005355: glucose transmembrane transporter activity | 1.72E-02 |
| 86 | GO:0004518: nuclease activity | 1.99E-02 |
| 87 | GO:0016597: amino acid binding | 2.37E-02 |
| 88 | GO:0016168: chlorophyll binding | 2.57E-02 |
| 89 | GO:0016491: oxidoreductase activity | 2.80E-02 |
| 90 | GO:0015238: drug transmembrane transporter activity | 3.09E-02 |
| 91 | GO:0004222: metalloendopeptidase activity | 3.20E-02 |
| 92 | GO:0004364: glutathione transferase activity | 4.11E-02 |
| 93 | GO:0004185: serine-type carboxypeptidase activity | 4.23E-02 |
| 94 | GO:0043621: protein self-association | 4.47E-02 |
| 95 | GO:0051287: NAD binding | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043233: organelle lumen | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.28E-34 |
| 3 | GO:0009570: chloroplast stroma | 9.62E-27 |
| 4 | GO:0009941: chloroplast envelope | 5.72E-15 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 1.72E-08 |
| 6 | GO:0005840: ribosome | 2.15E-07 |
| 7 | GO:0009534: chloroplast thylakoid | 1.71E-06 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 2.31E-06 |
| 9 | GO:0031977: thylakoid lumen | 6.34E-05 |
| 10 | GO:0009579: thylakoid | 1.03E-04 |
| 11 | GO:0000428: DNA-directed RNA polymerase complex | 1.93E-04 |
| 12 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.93E-04 |
| 13 | GO:0009547: plastid ribosome | 1.93E-04 |
| 14 | GO:0080085: signal recognition particle, chloroplast targeting | 4.33E-04 |
| 15 | GO:0000311: plastid large ribosomal subunit | 4.41E-04 |
| 16 | GO:0000312: plastid small ribosomal subunit | 5.65E-04 |
| 17 | GO:0009509: chromoplast | 7.06E-04 |
| 18 | GO:0005782: peroxisomal matrix | 7.06E-04 |
| 19 | GO:0034707: chloride channel complex | 2.10E-03 |
| 20 | GO:0009533: chloroplast stromal thylakoid | 2.96E-03 |
| 21 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 3.93E-03 |
| 22 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 4.44E-03 |
| 23 | GO:0046658: anchored component of plasma membrane | 4.70E-03 |
| 24 | GO:0019013: viral nucleocapsid | 7.36E-03 |
| 25 | GO:0009536: plastid | 7.60E-03 |
| 26 | GO:0030095: chloroplast photosystem II | 8.01E-03 |
| 27 | GO:0009654: photosystem II oxygen evolving complex | 1.08E-02 |
| 28 | GO:0009532: plastid stroma | 1.15E-02 |
| 29 | GO:0009523: photosystem II | 1.81E-02 |
| 30 | GO:0019898: extrinsic component of membrane | 1.81E-02 |
| 31 | GO:0009295: nucleoid | 2.27E-02 |
| 32 | GO:0030529: intracellular ribonucleoprotein complex | 2.47E-02 |
| 33 | GO:0022627: cytosolic small ribosomal subunit | 2.50E-02 |
| 34 | GO:0016020: membrane | 2.57E-02 |
| 35 | GO:0015934: large ribosomal subunit | 3.31E-02 |
| 36 | GO:0031969: chloroplast membrane | 3.62E-02 |
| 37 | GO:0022625: cytosolic large ribosomal subunit | 3.80E-02 |
| 38 | GO:0031225: anchored component of membrane | 4.42E-02 |