co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G71710

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
2	GO:0006780: uroporphyrinogen III biosynthetic process	0.00E+00
3	GO:0007638: mechanosensory behavior	0.00E+00
4	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
5	GO:0033614: chloroplast proton-transporting ATP synthase complex assembly	0.00E+00
6	GO:2000605: positive regulation of secondary growth	0.00E+00
7	GO:0090042: tubulin deacetylation	0.00E+00
8	GO:0090279: regulation of calcium ion import	0.00E+00
9	GO:0015805: S-adenosyl-L-methionine transport	0.00E+00
10	GO:0006114: glycerol biosynthetic process	0.00E+00
11	GO:1904526: regulation of microtubule binding	0.00E+00
12	GO:0071474: cellular hyperosmotic response	0.00E+00
13	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	5.75E-05
14	GO:2000021: regulation of ion homeostasis	2.13E-04
15	GO:0000025: maltose catabolic process	2.13E-04
16	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	2.13E-04
17	GO:0015808: L-alanine transport	2.13E-04
18	GO:0043266: regulation of potassium ion transport	2.13E-04
19	GO:0010480: microsporocyte differentiation	2.13E-04
20	GO:0031338: regulation of vesicle fusion	2.13E-04
21	GO:0010289: homogalacturonan biosynthetic process	4.76E-04
22	GO:0015804: neutral amino acid transport	4.76E-04
23	GO:0051262: protein tetramerization	4.76E-04
24	GO:0055129: L-proline biosynthetic process	4.76E-04
25	GO:0045717: negative regulation of fatty acid biosynthetic process	4.76E-04
26	GO:0010541: acropetal auxin transport	4.76E-04
27	GO:0098712: L-glutamate import across plasma membrane	4.76E-04
28	GO:0090630: activation of GTPase activity	7.74E-04
29	GO:2001295: malonyl-CoA biosynthetic process	7.74E-04
30	GO:0010160: formation of animal organ boundary	7.74E-04
31	GO:0016998: cell wall macromolecule catabolic process	1.07E-03
32	GO:0007231: osmosensory signaling pathway	1.10E-03
33	GO:0080170: hydrogen peroxide transmembrane transport	1.10E-03
34	GO:0043481: anthocyanin accumulation in tissues in response to UV light	1.10E-03
35	GO:0051016: barbed-end actin filament capping	1.10E-03
36	GO:0010306: rhamnogalacturonan II biosynthetic process	1.10E-03
37	GO:0033500: carbohydrate homeostasis	1.47E-03
38	GO:0031122: cytoplasmic microtubule organization	1.47E-03
39	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	1.47E-03
40	GO:0010021: amylopectin biosynthetic process	1.47E-03
41	GO:0007094: mitotic spindle assembly checkpoint	1.87E-03
42	GO:0000304: response to singlet oxygen	1.87E-03
43	GO:0048497: maintenance of floral organ identity	1.87E-03
44	GO:0019252: starch biosynthetic process	1.99E-03
45	GO:0006561: proline biosynthetic process	2.31E-03
46	GO:0010304: PSII associated light-harvesting complex II catabolic process	2.31E-03
47	GO:0006751: glutathione catabolic process	2.31E-03
48	GO:0042549: photosystem II stabilization	2.31E-03
49	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	2.31E-03
50	GO:0009913: epidermal cell differentiation	2.31E-03
51	GO:0006655: phosphatidylglycerol biosynthetic process	2.31E-03
52	GO:0060918: auxin transport	2.31E-03
53	GO:0006796: phosphate-containing compound metabolic process	2.31E-03
54	GO:1901657: glycosyl compound metabolic process	2.43E-03
55	GO:0045926: negative regulation of growth	2.77E-03
56	GO:2000033: regulation of seed dormancy process	2.77E-03
57	GO:0016042: lipid catabolic process	3.20E-03
58	GO:0043090: amino acid import	3.26E-03
59	GO:0051693: actin filament capping	3.26E-03
60	GO:0048437: floral organ development	3.26E-03
61	GO:0006633: fatty acid biosynthetic process	3.50E-03
62	GO:0015995: chlorophyll biosynthetic process	3.61E-03
63	GO:0010411: xyloglucan metabolic process	3.61E-03
64	GO:0000105: histidine biosynthetic process	3.78E-03
65	GO:0016559: peroxisome fission	3.78E-03
66	GO:0007155: cell adhesion	3.78E-03
67	GO:0008610: lipid biosynthetic process	3.78E-03
68	GO:0071482: cellular response to light stimulus	4.33E-03
69	GO:0015996: chlorophyll catabolic process	4.33E-03
70	GO:0009827: plant-type cell wall modification	4.33E-03
71	GO:0009657: plastid organization	4.33E-03
72	GO:0005975: carbohydrate metabolic process	4.42E-03
73	GO:0000902: cell morphogenesis	4.90E-03
74	GO:0005982: starch metabolic process	5.50E-03
75	GO:0009638: phototropism	5.50E-03
76	GO:0006779: porphyrin-containing compound biosynthetic process	5.50E-03
77	GO:0007346: regulation of mitotic cell cycle	5.50E-03
78	GO:0045036: protein targeting to chloroplast	6.12E-03
79	GO:0006949: syncytium formation	6.12E-03
80	GO:0010215: cellulose microfibril organization	6.12E-03
81	GO:0010162: seed dormancy process	6.12E-03
82	GO:0006782: protoporphyrinogen IX biosynthetic process	6.12E-03
83	GO:0019538: protein metabolic process	6.12E-03
84	GO:0006535: cysteine biosynthetic process from serine	6.12E-03
85	GO:0006816: calcium ion transport	6.77E-03
86	GO:0006415: translational termination	6.77E-03
87	GO:1903507: negative regulation of nucleic acid-templated transcription	6.77E-03
88	GO:0048229: gametophyte development	6.77E-03
89	GO:0042546: cell wall biogenesis	6.79E-03
90	GO:0008361: regulation of cell size	7.44E-03
91	GO:0012501: programmed cell death	7.44E-03
92	GO:0006820: anion transport	7.44E-03
93	GO:0005983: starch catabolic process	7.44E-03
94	GO:0016024: CDP-diacylglycerol biosynthetic process	7.44E-03
95	GO:0006468: protein phosphorylation	7.55E-03
96	GO:0030036: actin cytoskeleton organization	8.13E-03
97	GO:0010075: regulation of meristem growth	8.13E-03
98	GO:0009785: blue light signaling pathway	8.13E-03
99	GO:0006006: glucose metabolic process	8.13E-03
100	GO:0042538: hyperosmotic salinity response	8.20E-03
101	GO:0006813: potassium ion transport	8.80E-03
102	GO:0010540: basipetal auxin transport	8.84E-03
103	GO:0009934: regulation of meristem structural organization	8.84E-03
104	GO:0010020: chloroplast fission	8.84E-03
105	GO:0007015: actin filament organization	8.84E-03
106	GO:0009825: multidimensional cell growth	9.58E-03
107	GO:0019853: L-ascorbic acid biosynthetic process	9.58E-03
108	GO:0070588: calcium ion transmembrane transport	9.58E-03
109	GO:0006833: water transport	1.03E-02
110	GO:0019344: cysteine biosynthetic process	1.11E-02
111	GO:0008299: isoprenoid biosynthetic process	1.19E-02
112	GO:0016575: histone deacetylation	1.19E-02
113	GO:0007017: microtubule-based process	1.19E-02
114	GO:0009624: response to nematode	1.26E-02
115	GO:0031408: oxylipin biosynthetic process	1.27E-02
116	GO:0009742: brassinosteroid mediated signaling pathway	1.33E-02
117	GO:0035428: hexose transmembrane transport	1.36E-02
118	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.36E-02
119	GO:0006012: galactose metabolic process	1.45E-02
120	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.45E-02
121	GO:0048443: stamen development	1.53E-02
122	GO:0016117: carotenoid biosynthetic process	1.62E-02
123	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.62E-02
124	GO:0048653: anther development	1.72E-02
125	GO:0034220: ion transmembrane transport	1.72E-02
126	GO:0010182: sugar mediated signaling pathway	1.81E-02
127	GO:0048868: pollen tube development	1.81E-02
128	GO:0046323: glucose import	1.81E-02
129	GO:0045489: pectin biosynthetic process	1.81E-02
130	GO:0009958: positive gravitropism	1.81E-02
131	GO:0007018: microtubule-based movement	1.91E-02
132	GO:0009791: post-embryonic development	2.00E-02
133	GO:0048825: cotyledon development	2.00E-02
134	GO:0071554: cell wall organization or biogenesis	2.10E-02
135	GO:0030163: protein catabolic process	2.31E-02
136	GO:0009639: response to red or far red light	2.41E-02
137	GO:0009828: plant-type cell wall loosening	2.41E-02
138	GO:0009739: response to gibberellin	2.44E-02
139	GO:0006470: protein dephosphorylation	2.49E-02
140	GO:0071805: potassium ion transmembrane transport	2.52E-02
141	GO:0016126: sterol biosynthetic process	2.73E-02
142	GO:0010027: thylakoid membrane organization	2.73E-02
143	GO:0009816: defense response to bacterium, incompatible interaction	2.84E-02
144	GO:0016311: dephosphorylation	3.18E-02
145	GO:0030244: cellulose biosynthetic process	3.30E-02
146	GO:0048767: root hair elongation	3.42E-02
147	GO:0009834: plant-type secondary cell wall biogenesis	3.54E-02
148	GO:0010218: response to far red light	3.54E-02
149	GO:0006970: response to osmotic stress	3.63E-02
150	GO:0048527: lateral root development	3.66E-02
151	GO:0009637: response to blue light	3.91E-02
152	GO:0016051: carbohydrate biosynthetic process	3.91E-02
153	GO:0006839: mitochondrial transport	4.29E-02
154	GO:0046686: response to cadmium ion	4.40E-02
155	GO:0010114: response to red light	4.68E-02
156	GO:0009926: auxin polar transport	4.68E-02
157	GO:0051707: response to other organism	4.68E-02
158	GO:0009640: photomorphogenesis	4.68E-02
159	GO:0015979: photosynthesis	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0004852: uroporphyrinogen-III synthase activity	0.00E+00
2	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
3	GO:0043136: glycerol-3-phosphatase activity	0.00E+00
4	GO:0000121: glycerol-1-phosphatase activity	0.00E+00
5	GO:0005227: calcium activated cation channel activity	0.00E+00
6	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
7	GO:0051721: protein phosphatase 2A binding	0.00E+00
8	GO:0042903: tubulin deacetylase activity	0.00E+00
9	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
10	GO:0043014: alpha-tubulin binding	0.00E+00
11	GO:0033201: alpha-1,4-glucan synthase activity	2.14E-06
12	GO:0004373: glycogen (starch) synthase activity	7.85E-06
13	GO:0009011: starch synthase activity	3.29E-05
14	GO:0004033: aldo-keto reductase (NADP) activity	1.82E-04
15	GO:0003879: ATP phosphoribosyltransferase activity	2.13E-04
16	GO:0030941: chloroplast targeting sequence binding	2.13E-04
17	GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity	2.13E-04
18	GO:0015194: L-serine transmembrane transporter activity	2.13E-04
19	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	2.13E-04
20	GO:0004349: glutamate 5-kinase activity	2.13E-04
21	GO:0004350: glutamate-5-semialdehyde dehydrogenase activity	2.13E-04
22	GO:0004134: 4-alpha-glucanotransferase activity	2.13E-04
23	GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity	2.13E-04
24	GO:0008568: microtubule-severing ATPase activity	2.13E-04
25	GO:0034256: chlorophyll(ide) b reductase activity	2.13E-04
26	GO:0004163: diphosphomevalonate decarboxylase activity	2.13E-04
27	GO:0016788: hydrolase activity, acting on ester bonds	2.50E-04
28	GO:0003839: gamma-glutamylcyclotransferase activity	4.76E-04
29	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	4.76E-04
30	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	4.76E-04
31	GO:0015180: L-alanine transmembrane transporter activity	4.76E-04
32	GO:0050017: L-3-cyanoalanine synthase activity	4.76E-04
33	GO:0004565: beta-galactosidase activity	5.75E-04
34	GO:0070402: NADPH binding	7.74E-04
35	GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity	7.74E-04
36	GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity	7.74E-04
37	GO:0015193: L-proline transmembrane transporter activity	7.74E-04
38	GO:0004075: biotin carboxylase activity	7.74E-04
39	GO:0030267: glyoxylate reductase (NADP) activity	7.74E-04
40	GO:0001872: (1->3)-beta-D-glucan binding	1.10E-03
41	GO:0015186: L-glutamine transmembrane transporter activity	1.10E-03
42	GO:0015175: neutral amino acid transmembrane transporter activity	1.10E-03
43	GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity	1.10E-03
44	GO:0048487: beta-tubulin binding	1.10E-03
45	GO:0016149: translation release factor activity, codon specific	1.10E-03
46	GO:0016836: hydro-lyase activity	1.47E-03
47	GO:0051861: glycolipid binding	1.47E-03
48	GO:0005313: L-glutamate transmembrane transporter activity	1.47E-03
49	GO:0008526: phosphatidylinositol transporter activity	1.47E-03
50	GO:0003989: acetyl-CoA carboxylase activity	1.87E-03
51	GO:0008381: mechanically-gated ion channel activity	1.87E-03
52	GO:0017137: Rab GTPase binding	1.87E-03
53	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.13E-03
54	GO:0052689: carboxylic ester hydrolase activity	2.15E-03
55	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.31E-03
56	GO:0004124: cysteine synthase activity	2.77E-03
57	GO:0015631: tubulin binding	2.77E-03
58	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	2.77E-03
59	GO:0005261: cation channel activity	2.77E-03
60	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	2.77E-03
61	GO:0016413: O-acetyltransferase activity	2.90E-03
62	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.23E-03
63	GO:0004427: inorganic diphosphatase activity	3.26E-03
64	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.61E-03
65	GO:0102483: scopolin beta-glucosidase activity	3.61E-03
66	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	4.33E-03
67	GO:0003747: translation release factor activity	4.90E-03
68	GO:0047617: acyl-CoA hydrolase activity	5.50E-03
69	GO:0008422: beta-glucosidase activity	5.53E-03
70	GO:0004674: protein serine/threonine kinase activity	6.47E-03
71	GO:0047372: acylglycerol lipase activity	6.77E-03
72	GO:0008378: galactosyltransferase activity	7.44E-03
73	GO:0005262: calcium channel activity	8.13E-03
74	GO:0010329: auxin efflux transmembrane transporter activity	8.13E-03
75	GO:0004190: aspartic-type endopeptidase activity	9.58E-03
76	GO:0016301: kinase activity	1.09E-02
77	GO:0004407: histone deacetylase activity	1.11E-02
78	GO:0003714: transcription corepressor activity	1.11E-02
79	GO:0015079: potassium ion transmembrane transporter activity	1.19E-02
80	GO:0008324: cation transmembrane transporter activity	1.19E-02
81	GO:0004707: MAP kinase activity	1.27E-02
82	GO:0033612: receptor serine/threonine kinase binding	1.27E-02
83	GO:0004672: protein kinase activity	1.33E-02
84	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.36E-02
85	GO:0030570: pectate lyase activity	1.45E-02
86	GO:0005524: ATP binding	1.70E-02
87	GO:0016853: isomerase activity	1.91E-02
88	GO:0005355: glucose transmembrane transporter activity	1.91E-02
89	GO:0019901: protein kinase binding	2.00E-02
90	GO:0008017: microtubule binding	2.28E-02
91	GO:0051015: actin filament binding	2.31E-02
92	GO:0005200: structural constituent of cytoskeleton	2.52E-02
93	GO:0016787: hydrolase activity	2.53E-02
94	GO:0015250: water channel activity	2.73E-02
95	GO:0042802: identical protein binding	2.77E-02
96	GO:0005515: protein binding	2.80E-02
97	GO:0004721: phosphoprotein phosphatase activity	3.07E-02
98	GO:0030247: polysaccharide binding	3.07E-02
99	GO:0008236: serine-type peptidase activity	3.18E-02
100	GO:0000287: magnesium ion binding	3.31E-02
101	GO:0005096: GTPase activator activity	3.42E-02
102	GO:0030145: manganese ion binding	3.66E-02
103	GO:0043621: protein self-association	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0009930: longitudinal side of cell surface	0.00E+00
2	GO:0009507: chloroplast	1.10E-08
3	GO:0009501: amyloplast	3.37E-06
4	GO:0009570: chloroplast stroma	1.90E-05
5	GO:0005886: plasma membrane	6.90E-05
6	GO:0008290: F-actin capping protein complex	4.76E-04
7	GO:0016328: lateral plasma membrane	7.74E-04
8	GO:0009897: external side of plasma membrane	7.74E-04
9	GO:0015630: microtubule cytoskeleton	1.10E-03
10	GO:0005618: cell wall	1.37E-03
11	GO:0005828: kinetochore microtubule	1.47E-03
12	GO:0000776: kinetochore	1.87E-03
13	GO:0010369: chromocenter	2.77E-03
14	GO:0009534: chloroplast thylakoid	2.77E-03
15	GO:0000777: condensed chromosome kinetochore	2.77E-03
16	GO:0031359: integral component of chloroplast outer membrane	3.26E-03
17	GO:0009707: chloroplast outer membrane	4.00E-03
18	GO:0005876: spindle microtubule	5.50E-03
19	GO:0005576: extracellular region	5.55E-03
20	GO:0009941: chloroplast envelope	5.81E-03
21	GO:0005884: actin filament	6.77E-03
22	GO:0005578: proteinaceous extracellular matrix	8.13E-03
23	GO:0009508: plastid chromosome	8.13E-03
24	GO:0048046: apoplast	8.87E-03
25	GO:0031969: chloroplast membrane	9.04E-03
26	GO:0009505: plant-type cell wall	1.01E-02
27	GO:0043234: protein complex	1.03E-02
28	GO:0005871: kinesin complex	1.62E-02
29	GO:0005768: endosome	1.97E-02
30	GO:0009295: nucleoid	2.52E-02
31	GO:0009506: plasmodesma	2.79E-02
32	GO:0046658: anchored component of plasma membrane	2.88E-02
33	GO:0000139: Golgi membrane	3.60E-02
34	GO:0005874: microtubule	4.03E-02
35	GO:0016021: integral component of membrane	4.89E-02