co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G71220

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043201: response to leucine	0.00E+00
2	GO:0080052: response to histidine	0.00E+00
3	GO:0080053: response to phenylalanine	0.00E+00
4	GO:0002376: immune system process	0.00E+00
5	GO:0030149: sphingolipid catabolic process	0.00E+00
6	GO:0072722: response to amitrole	0.00E+00
7	GO:0006042: glucosamine biosynthetic process	0.00E+00
8	GO:0006592: ornithine biosynthetic process	0.00E+00
9	GO:1901137: carbohydrate derivative biosynthetic process	0.00E+00
10	GO:0034976: response to endoplasmic reticulum stress	1.01E-10
11	GO:0009627: systemic acquired resistance	1.72E-08
12	GO:0042742: defense response to bacterium	1.57E-07
13	GO:0006457: protein folding	1.98E-07
14	GO:0045454: cell redox homeostasis	4.08E-07
15	GO:0006102: isocitrate metabolic process	2.56E-06
16	GO:0010150: leaf senescence	5.71E-06
17	GO:0072334: UDP-galactose transmembrane transport	1.47E-05
18	GO:0000162: tryptophan biosynthetic process	3.46E-05
19	GO:0009697: salicylic acid biosynthetic process	4.37E-05
20	GO:0018279: protein N-linked glycosylation via asparagine	4.37E-05
21	GO:0006099: tricarboxylic acid cycle	4.81E-05
22	GO:0046686: response to cadmium ion	5.97E-05
23	GO:0009306: protein secretion	8.38E-05
24	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	9.02E-05
25	GO:0006605: protein targeting	1.53E-04
26	GO:0000302: response to reactive oxygen species	1.61E-04
27	GO:0009700: indole phytoalexin biosynthetic process	1.91E-04
28	GO:0043687: post-translational protein modification	1.91E-04
29	GO:0010230: alternative respiration	1.91E-04
30	GO:0051775: response to redox state	1.91E-04
31	GO:0046244: salicylic acid catabolic process	1.91E-04
32	GO:0030968: endoplasmic reticulum unfolded protein response	1.91E-04
33	GO:0010266: response to vitamin B1	1.91E-04
34	GO:0019276: UDP-N-acetylgalactosamine metabolic process	1.91E-04
35	GO:0080120: CAAX-box protein maturation	1.91E-04
36	GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine	1.91E-04
37	GO:0034975: protein folding in endoplasmic reticulum	1.91E-04
38	GO:0071586: CAAX-box protein processing	1.91E-04
39	GO:0006047: UDP-N-acetylglucosamine metabolic process	1.91E-04
40	GO:1990641: response to iron ion starvation	1.91E-04
41	GO:0006979: response to oxidative stress	3.76E-04
42	GO:0006101: citrate metabolic process	4.29E-04
43	GO:0019752: carboxylic acid metabolic process	4.29E-04
44	GO:0030003: cellular cation homeostasis	4.29E-04
45	GO:0042939: tripeptide transport	4.29E-04
46	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	4.29E-04
47	GO:0008535: respiratory chain complex IV assembly	4.29E-04
48	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	6.99E-04
49	GO:0006011: UDP-glucose metabolic process	6.99E-04
50	GO:0010272: response to silver ion	6.99E-04
51	GO:0006487: protein N-linked glycosylation	7.65E-04
52	GO:0033014: tetrapyrrole biosynthetic process	9.97E-04
53	GO:0010116: positive regulation of abscisic acid biosynthetic process	9.97E-04
54	GO:0002239: response to oomycetes	9.97E-04
55	GO:0030433: ubiquitin-dependent ERAD pathway	1.00E-03
56	GO:0031348: negative regulation of defense response	1.00E-03
57	GO:0071456: cellular response to hypoxia	1.00E-03
58	GO:0009625: response to insect	1.09E-03
59	GO:0042938: dipeptide transport	1.32E-03
60	GO:0080037: negative regulation of cytokinin-activated signaling pathway	1.32E-03
61	GO:0010483: pollen tube reception	1.32E-03
62	GO:0010387: COP9 signalosome assembly	1.32E-03
63	GO:0045088: regulation of innate immune response	1.32E-03
64	GO:0009553: embryo sac development	1.55E-03
65	GO:0000304: response to singlet oxygen	1.68E-03
66	GO:2000762: regulation of phenylpropanoid metabolic process	1.68E-03
67	GO:0006564: L-serine biosynthetic process	1.68E-03
68	GO:0006097: glyoxylate cycle	1.68E-03
69	GO:0006886: intracellular protein transport	2.00E-03
70	GO:0047484: regulation of response to osmotic stress	2.07E-03
71	GO:0006014: D-ribose metabolic process	2.07E-03
72	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	2.07E-03
73	GO:0042372: phylloquinone biosynthetic process	2.49E-03
74	GO:0009751: response to salicylic acid	2.56E-03
75	GO:0006511: ubiquitin-dependent protein catabolic process	2.57E-03
76	GO:0000338: protein deneddylation	2.93E-03
77	GO:1902074: response to salt	2.93E-03
78	GO:0030091: protein repair	3.40E-03
79	GO:0030162: regulation of proteolysis	3.40E-03
80	GO:0006875: cellular metal ion homeostasis	3.40E-03
81	GO:0009407: toxin catabolic process	3.77E-03
82	GO:0010120: camalexin biosynthetic process	3.88E-03
83	GO:0006526: arginine biosynthetic process	3.88E-03
84	GO:0010204: defense response signaling pathway, resistance gene-independent	3.88E-03
85	GO:0010043: response to zinc ion	3.95E-03
86	GO:0009617: response to bacterium	4.04E-03
87	GO:0006783: heme biosynthetic process	4.40E-03
88	GO:0010112: regulation of systemic acquired resistance	4.40E-03
89	GO:0015780: nucleotide-sugar transport	4.40E-03
90	GO:0046685: response to arsenic-containing substance	4.40E-03
91	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	4.93E-03
92	GO:0010205: photoinhibition	4.93E-03
93	GO:0043067: regulation of programmed cell death	4.93E-03
94	GO:0042542: response to hydrogen peroxide	5.35E-03
95	GO:0009870: defense response signaling pathway, resistance gene-dependent	5.48E-03
96	GO:0006032: chitin catabolic process	5.48E-03
97	GO:0006952: defense response	5.86E-03
98	GO:0006816: calcium ion transport	6.06E-03
99	GO:0052544: defense response by callose deposition in cell wall	6.06E-03
100	GO:0009089: lysine biosynthetic process via diaminopimelate	6.06E-03
101	GO:0000272: polysaccharide catabolic process	6.06E-03
102	GO:0009636: response to toxic substance	6.26E-03
103	GO:0016925: protein sumoylation	6.66E-03
104	GO:0006790: sulfur compound metabolic process	6.66E-03
105	GO:0010075: regulation of meristem growth	7.28E-03
106	GO:0006094: gluconeogenesis	7.28E-03
107	GO:0010200: response to chitin	7.70E-03
108	GO:0015031: protein transport	7.86E-03
109	GO:0009934: regulation of meristem structural organization	7.91E-03
110	GO:0046854: phosphatidylinositol phosphorylation	8.57E-03
111	GO:0009409: response to cold	8.76E-03
112	GO:0006096: glycolytic process	8.88E-03
113	GO:0048316: seed development	9.17E-03
114	GO:0006874: cellular calcium ion homeostasis	1.07E-02
115	GO:0009695: jasmonic acid biosynthetic process	1.07E-02
116	GO:0031408: oxylipin biosynthetic process	1.14E-02
117	GO:0016998: cell wall macromolecule catabolic process	1.14E-02
118	GO:0019748: secondary metabolic process	1.21E-02
119	GO:0009753: response to jasmonic acid	1.32E-02
120	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.45E-02
121	GO:0009651: response to salt stress	1.51E-02
122	GO:0000413: protein peptidyl-prolyl isomerization	1.53E-02
123	GO:0010118: stomatal movement	1.53E-02
124	GO:0042631: cellular response to water deprivation	1.53E-02
125	GO:0009790: embryo development	1.57E-02
126	GO:0010154: fruit development	1.62E-02
127	GO:0006520: cellular amino acid metabolic process	1.62E-02
128	GO:0010197: polar nucleus fusion	1.62E-02
129	GO:0048868: pollen tube development	1.62E-02
130	GO:0009646: response to absence of light	1.70E-02
131	GO:0009414: response to water deprivation	1.76E-02
132	GO:0019252: starch biosynthetic process	1.79E-02
133	GO:0009851: auxin biosynthetic process	1.79E-02
134	GO:0002229: defense response to oomycetes	1.88E-02
135	GO:0010193: response to ozone	1.88E-02
136	GO:0009737: response to abscisic acid	1.91E-02
137	GO:0009630: gravitropism	1.97E-02
138	GO:0030163: protein catabolic process	2.06E-02
139	GO:0006464: cellular protein modification process	2.15E-02
140	GO:0009567: double fertilization forming a zygote and endosperm	2.15E-02
141	GO:0009735: response to cytokinin	2.24E-02
142	GO:0009615: response to virus	2.44E-02
143	GO:0009555: pollen development	2.50E-02
144	GO:0009416: response to light stimulus	2.50E-02
145	GO:0009816: defense response to bacterium, incompatible interaction	2.54E-02
146	GO:0015995: chlorophyll biosynthetic process	2.74E-02
147	GO:0006950: response to stress	2.74E-02
148	GO:0016311: dephosphorylation	2.84E-02
149	GO:0009817: defense response to fungus, incompatible interaction	2.95E-02
150	GO:0048527: lateral root development	3.27E-02
151	GO:0045087: innate immune response	3.49E-02
152	GO:0006508: proteolysis	3.53E-02
153	GO:0016192: vesicle-mediated transport	3.74E-02
154	GO:0009640: photomorphogenesis	4.18E-02
155	GO:0009744: response to sucrose	4.18E-02
156	GO:0051707: response to other organism	4.18E-02
157	GO:0009644: response to high light intensity	4.41E-02
158	GO:0008643: carbohydrate transport	4.41E-02
159	GO:0006855: drug transmembrane transport	4.66E-02
160	GO:0031347: regulation of defense response	4.78E-02
161	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.78E-02
162	GO:0009846: pollen germination	4.90E-02
163	GO:0042538: hyperosmotic salinity response	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0050220: prostaglandin-E synthase activity	0.00E+00
2	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
3	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
4	GO:0008777: acetylornithine deacetylase activity	0.00E+00
5	GO:0004360: glutamine-fructose-6-phosphate transaminase (isomerizing) activity	0.00E+00
6	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
7	GO:0004164: diphthine synthase activity	0.00E+00
8	GO:0051670: inulinase activity	0.00E+00
9	GO:0003756: protein disulfide isomerase activity	7.44E-10
10	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	2.97E-07
11	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.47E-05
12	GO:0005459: UDP-galactose transmembrane transporter activity	4.37E-05
13	GO:0004298: threonine-type endopeptidase activity	5.59E-05
14	GO:0008320: protein transmembrane transporter activity	1.20E-04
15	GO:0051669: fructan beta-fructosidase activity	1.91E-04
16	GO:0004048: anthranilate phosphoribosyltransferase activity	1.91E-04
17	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	1.91E-04
18	GO:0015157: oligosaccharide transmembrane transporter activity	1.91E-04
19	GO:0004325: ferrochelatase activity	1.91E-04
20	GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity	1.91E-04
21	GO:0004321: fatty-acyl-CoA synthase activity	1.91E-04
22	GO:0008909: isochorismate synthase activity	1.91E-04
23	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	1.91E-04
24	GO:0031219: levanase activity	1.91E-04
25	GO:0010285: L,L-diaminopimelate aminotransferase activity	1.91E-04
26	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.91E-04
27	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	1.91E-04
28	GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity	1.91E-04
29	GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	1.91E-04
30	GO:0004425: indole-3-glycerol-phosphate synthase activity	1.91E-04
31	GO:0033984: indole-3-glycerol-phosphate lyase activity	1.91E-04
32	GO:0097367: carbohydrate derivative binding	1.91E-04
33	GO:0008233: peptidase activity	2.60E-04
34	GO:0005509: calcium ion binding	3.05E-04
35	GO:0004338: glucan exo-1,3-beta-glucosidase activity	4.29E-04
36	GO:0042937: tripeptide transporter activity	4.29E-04
37	GO:0003994: aconitate hydratase activity	4.29E-04
38	GO:0004148: dihydrolipoyl dehydrogenase activity	6.99E-04
39	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	6.99E-04
40	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	6.99E-04
41	GO:0000030: mannosyltransferase activity	6.99E-04
42	GO:0008430: selenium binding	6.99E-04
43	GO:0005460: UDP-glucose transmembrane transporter activity	9.97E-04
44	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	9.97E-04
45	GO:0004576: oligosaccharyl transferase activity	1.32E-03
46	GO:0004834: tryptophan synthase activity	1.32E-03
47	GO:0042936: dipeptide transporter activity	1.32E-03
48	GO:0051082: unfolded protein binding	1.61E-03
49	GO:0015035: protein disulfide oxidoreductase activity	1.67E-03
50	GO:0005452: inorganic anion exchanger activity	1.68E-03
51	GO:0015301: anion:anion antiporter activity	1.68E-03
52	GO:0036402: proteasome-activating ATPase activity	2.07E-03
53	GO:0030976: thiamine pyrophosphate binding	2.07E-03
54	GO:0008483: transaminase activity	2.34E-03
55	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.49E-03
56	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.49E-03
57	GO:0004747: ribokinase activity	2.49E-03
58	GO:0005261: cation channel activity	2.49E-03
59	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	2.49E-03
60	GO:0016831: carboxy-lyase activity	2.93E-03
61	GO:0005338: nucleotide-sugar transmembrane transporter activity	2.93E-03
62	GO:0030247: polysaccharide binding	3.09E-03
63	GO:0008865: fructokinase activity	3.40E-03
64	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.42E-03
65	GO:0004222: metalloendopeptidase activity	3.77E-03
66	GO:0050897: cobalt ion binding	3.95E-03
67	GO:0016207: 4-coumarate-CoA ligase activity	4.40E-03
68	GO:0050661: NADP binding	4.92E-03
69	GO:0045309: protein phosphorylated amino acid binding	4.93E-03
70	GO:0030955: potassium ion binding	4.93E-03
71	GO:0004743: pyruvate kinase activity	4.93E-03
72	GO:0004364: glutathione transferase activity	5.35E-03
73	GO:0004568: chitinase activity	5.48E-03
74	GO:0004129: cytochrome-c oxidase activity	6.06E-03
75	GO:0019904: protein domain specific binding	6.06E-03
76	GO:0051287: NAD binding	6.74E-03
77	GO:0005262: calcium channel activity	7.28E-03
78	GO:0004175: endopeptidase activity	7.91E-03
79	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	7.91E-03
80	GO:0017025: TBP-class protein binding	8.57E-03
81	GO:0008061: chitin binding	8.57E-03
82	GO:0005217: intracellular ligand-gated ion channel activity	8.57E-03
83	GO:0004970: ionotropic glutamate receptor activity	8.57E-03
84	GO:0004190: aspartic-type endopeptidase activity	8.57E-03
85	GO:0005507: copper ion binding	1.07E-02
86	GO:0016746: transferase activity, transferring acyl groups	1.10E-02
87	GO:0016779: nucleotidyltransferase activity	1.21E-02
88	GO:0008810: cellulase activity	1.29E-02
89	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.37E-02
90	GO:0030170: pyridoxal phosphate binding	1.49E-02
91	GO:0016301: kinase activity	1.55E-02
92	GO:0016853: isomerase activity	1.70E-02
93	GO:0015297: antiporter activity	1.77E-02
94	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.06E-02
95	GO:0008237: metallopeptidase activity	2.25E-02
96	GO:0051213: dioxygenase activity	2.44E-02
97	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.64E-02
98	GO:0004683: calmodulin-dependent protein kinase activity	2.74E-02
99	GO:0000287: magnesium ion binding	2.82E-02
100	GO:0015238: drug transmembrane transporter activity	3.05E-02
101	GO:0016740: transferase activity	3.20E-02
102	GO:0050660: flavin adenine dinucleotide binding	3.32E-02
103	GO:0003746: translation elongation factor activity	3.49E-02
104	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.49E-02
105	GO:0004497: monooxygenase activity	3.56E-02
106	GO:0000987: core promoter proximal region sequence-specific DNA binding	3.60E-02
107	GO:0051539: 4 iron, 4 sulfur cluster binding	3.83E-02
108	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.66E-02

Rank	GO Term	Adjusted P value
1	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
2	GO:0005783: endoplasmic reticulum	1.24E-20
3	GO:0005788: endoplasmic reticulum lumen	4.60E-12
4	GO:0008250: oligosaccharyltransferase complex	2.97E-07
5	GO:0030134: ER to Golgi transport vesicle	1.74E-06
6	GO:0009507: chloroplast	5.98E-06
7	GO:0005839: proteasome core complex	5.59E-05
8	GO:0000502: proteasome complex	1.23E-04
9	GO:0045252: oxoglutarate dehydrogenase complex	1.91E-04
10	GO:0019773: proteasome core complex, alpha-subunit complex	1.91E-04
11	GO:0005623: cell	3.42E-04
12	GO:0005829: cytosol	5.49E-04
13	GO:0030176: integral component of endoplasmic reticulum membrane	6.22E-04
14	GO:0048046: apoplast	7.25E-04
15	GO:0005789: endoplasmic reticulum membrane	9.51E-04
16	GO:0030660: Golgi-associated vesicle membrane	1.32E-03
17	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	1.32E-03
18	GO:0016020: membrane	1.57E-03
19	GO:0005746: mitochondrial respiratory chain	1.68E-03
20	GO:0005886: plasma membrane	1.90E-03
21	GO:0005774: vacuolar membrane	1.92E-03
22	GO:0009536: plastid	2.11E-03
23	GO:0005801: cis-Golgi network	2.49E-03
24	GO:0031597: cytosolic proteasome complex	2.49E-03
25	GO:0030173: integral component of Golgi membrane	2.49E-03
26	GO:0031595: nuclear proteasome complex	2.93E-03
27	GO:0016021: integral component of membrane	3.05E-03
28	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	3.40E-03
29	GO:0000326: protein storage vacuole	3.88E-03
30	GO:0008180: COP9 signalosome	4.40E-03
31	GO:0008540: proteasome regulatory particle, base subcomplex	4.93E-03
32	GO:0005740: mitochondrial envelope	5.48E-03
33	GO:0005765: lysosomal membrane	6.06E-03
34	GO:0031969: chloroplast membrane	7.38E-03
35	GO:0009505: plant-type cell wall	7.66E-03
36	GO:0005773: vacuole	1.41E-02
37	GO:0005759: mitochondrial matrix	1.69E-02
38	GO:0016592: mediator complex	1.97E-02
39	GO:0005618: cell wall	2.07E-02
40	GO:0032580: Golgi cisterna membrane	2.15E-02
41	GO:0005739: mitochondrion	2.54E-02
42	GO:0019005: SCF ubiquitin ligase complex	2.95E-02
43	GO:0005794: Golgi apparatus	3.87E-02