GO Enrichment Analysis of Co-expressed Genes with
AT1G71030
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 2 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 3 | GO:0015979: photosynthesis | 5.57E-07 |
| 4 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 6.65E-06 |
| 5 | GO:0010206: photosystem II repair | 1.20E-04 |
| 6 | GO:0000481: maturation of 5S rRNA | 1.22E-04 |
| 7 | GO:0034337: RNA folding | 1.22E-04 |
| 8 | GO:0043085: positive regulation of catalytic activity | 2.00E-04 |
| 9 | GO:0009773: photosynthetic electron transport in photosystem I | 2.00E-04 |
| 10 | GO:0006810: transport | 2.01E-04 |
| 11 | GO:0006094: gluconeogenesis | 2.65E-04 |
| 12 | GO:0080151: positive regulation of salicylic acid mediated signaling pathway | 2.82E-04 |
| 13 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 2.82E-04 |
| 14 | GO:0010207: photosystem II assembly | 3.00E-04 |
| 15 | GO:0006000: fructose metabolic process | 4.65E-04 |
| 16 | GO:0006013: mannose metabolic process | 4.65E-04 |
| 17 | GO:1901332: negative regulation of lateral root development | 6.66E-04 |
| 18 | GO:0006546: glycine catabolic process | 8.84E-04 |
| 19 | GO:0045727: positive regulation of translation | 8.84E-04 |
| 20 | GO:0015994: chlorophyll metabolic process | 8.84E-04 |
| 21 | GO:2000762: regulation of phenylpropanoid metabolic process | 1.12E-03 |
| 22 | GO:0006461: protein complex assembly | 1.12E-03 |
| 23 | GO:0016120: carotene biosynthetic process | 1.12E-03 |
| 24 | GO:0008152: metabolic process | 1.17E-03 |
| 25 | GO:1902456: regulation of stomatal opening | 1.37E-03 |
| 26 | GO:0042549: photosystem II stabilization | 1.37E-03 |
| 27 | GO:0000741: karyogamy | 1.37E-03 |
| 28 | GO:0010019: chloroplast-nucleus signaling pathway | 1.64E-03 |
| 29 | GO:0018298: protein-chromophore linkage | 1.84E-03 |
| 30 | GO:1900057: positive regulation of leaf senescence | 1.92E-03 |
| 31 | GO:0009645: response to low light intensity stimulus | 1.92E-03 |
| 32 | GO:0009772: photosynthetic electron transport in photosystem II | 1.92E-03 |
| 33 | GO:0010196: nonphotochemical quenching | 1.92E-03 |
| 34 | GO:0006402: mRNA catabolic process | 2.22E-03 |
| 35 | GO:0009850: auxin metabolic process | 2.22E-03 |
| 36 | GO:0032508: DNA duplex unwinding | 2.22E-03 |
| 37 | GO:0009642: response to light intensity | 2.22E-03 |
| 38 | GO:0032544: plastid translation | 2.54E-03 |
| 39 | GO:0009932: cell tip growth | 2.54E-03 |
| 40 | GO:0006002: fructose 6-phosphate metabolic process | 2.54E-03 |
| 41 | GO:0009657: plastid organization | 2.54E-03 |
| 42 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 2.87E-03 |
| 43 | GO:0010205: photoinhibition | 3.21E-03 |
| 44 | GO:0009638: phototropism | 3.21E-03 |
| 45 | GO:0009644: response to high light intensity | 3.23E-03 |
| 46 | GO:0009750: response to fructose | 3.94E-03 |
| 47 | GO:0009698: phenylpropanoid metabolic process | 3.94E-03 |
| 48 | GO:0045454: cell redox homeostasis | 4.17E-03 |
| 49 | GO:0005983: starch catabolic process | 4.32E-03 |
| 50 | GO:2000028: regulation of photoperiodism, flowering | 4.71E-03 |
| 51 | GO:0018107: peptidyl-threonine phosphorylation | 4.71E-03 |
| 52 | GO:0009767: photosynthetic electron transport chain | 4.71E-03 |
| 53 | GO:0005986: sucrose biosynthetic process | 4.71E-03 |
| 54 | GO:0010053: root epidermal cell differentiation | 5.54E-03 |
| 55 | GO:0009768: photosynthesis, light harvesting in photosystem I | 6.87E-03 |
| 56 | GO:0006418: tRNA aminoacylation for protein translation | 6.87E-03 |
| 57 | GO:0061077: chaperone-mediated protein folding | 7.34E-03 |
| 58 | GO:0010017: red or far-red light signaling pathway | 7.81E-03 |
| 59 | GO:0006413: translational initiation | 9.19E-03 |
| 60 | GO:0016117: carotenoid biosynthetic process | 9.31E-03 |
| 61 | GO:0007623: circadian rhythm | 9.86E-03 |
| 62 | GO:0009958: positive gravitropism | 1.04E-02 |
| 63 | GO:0006662: glycerol ether metabolic process | 1.04E-02 |
| 64 | GO:0010197: polar nucleus fusion | 1.04E-02 |
| 65 | GO:0010193: response to ozone | 1.20E-02 |
| 66 | GO:0006508: proteolysis | 1.21E-02 |
| 67 | GO:0030163: protein catabolic process | 1.32E-02 |
| 68 | GO:0071805: potassium ion transmembrane transport | 1.44E-02 |
| 69 | GO:0009658: chloroplast organization | 1.53E-02 |
| 70 | GO:0015995: chlorophyll biosynthetic process | 1.75E-02 |
| 71 | GO:0016311: dephosphorylation | 1.82E-02 |
| 72 | GO:0048481: plant ovule development | 1.88E-02 |
| 73 | GO:0009817: defense response to fungus, incompatible interaction | 1.88E-02 |
| 74 | GO:0010311: lateral root formation | 1.95E-02 |
| 75 | GO:0010218: response to far red light | 2.02E-02 |
| 76 | GO:0034599: cellular response to oxidative stress | 2.30E-02 |
| 77 | GO:0045892: negative regulation of transcription, DNA-templated | 2.31E-02 |
| 78 | GO:0010114: response to red light | 2.67E-02 |
| 79 | GO:0009664: plant-type cell wall organization | 3.14E-02 |
| 80 | GO:0006364: rRNA processing | 3.30E-02 |
| 81 | GO:0009585: red, far-red light phototransduction | 3.30E-02 |
| 82 | GO:0006813: potassium ion transport | 3.30E-02 |
| 83 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.38E-02 |
| 84 | GO:0010224: response to UV-B | 3.38E-02 |
| 85 | GO:0006096: glycolytic process | 3.72E-02 |
| 86 | GO:0009626: plant-type hypersensitive response | 3.89E-02 |
| 87 | GO:0009734: auxin-activated signaling pathway | 3.94E-02 |
| 88 | GO:0018105: peptidyl-serine phosphorylation | 4.33E-02 |
| 89 | GO:0009735: response to cytokinin | 4.53E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity | 0.00E+00 |
| 2 | GO:0045436: lycopene beta cyclase activity | 0.00E+00 |
| 3 | GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity | 0.00E+00 |
| 4 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 5 | GO:0005528: FK506 binding | 2.32E-07 |
| 6 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.25E-05 |
| 7 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.91E-05 |
| 8 | GO:0052638: indole-3-butyrate beta-glucosyltransferase activity | 1.22E-04 |
| 9 | GO:0046906: tetrapyrrole binding | 1.22E-04 |
| 10 | GO:0047746: chlorophyllase activity | 2.82E-04 |
| 11 | GO:0016868: intramolecular transferase activity, phosphotransferases | 2.82E-04 |
| 12 | GO:0005094: Rho GDP-dissociation inhibitor activity | 2.82E-04 |
| 13 | GO:0004047: aminomethyltransferase activity | 2.82E-04 |
| 14 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 2.82E-04 |
| 15 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 2.82E-04 |
| 16 | GO:0002161: aminoacyl-tRNA editing activity | 4.65E-04 |
| 17 | GO:0004176: ATP-dependent peptidase activity | 5.06E-04 |
| 18 | GO:0048038: quinone binding | 9.99E-04 |
| 19 | GO:0004332: fructose-bisphosphate aldolase activity | 1.37E-03 |
| 20 | GO:0016168: chlorophyll binding | 1.50E-03 |
| 21 | GO:0004559: alpha-mannosidase activity | 1.64E-03 |
| 22 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.64E-03 |
| 23 | GO:0016787: hydrolase activity | 1.81E-03 |
| 24 | GO:0019899: enzyme binding | 1.92E-03 |
| 25 | GO:0005096: GTPase activator activity | 1.94E-03 |
| 26 | GO:0004185: serine-type carboxypeptidase activity | 2.99E-03 |
| 27 | GO:0008047: enzyme activator activity | 3.57E-03 |
| 28 | GO:0000049: tRNA binding | 4.32E-03 |
| 29 | GO:0031072: heat shock protein binding | 4.71E-03 |
| 30 | GO:0004565: beta-galactosidase activity | 4.71E-03 |
| 31 | GO:0008266: poly(U) RNA binding | 5.12E-03 |
| 32 | GO:0031409: pigment binding | 5.98E-03 |
| 33 | GO:0015079: potassium ion transmembrane transporter activity | 6.87E-03 |
| 34 | GO:0022891: substrate-specific transmembrane transporter activity | 8.30E-03 |
| 35 | GO:0003756: protein disulfide isomerase activity | 8.80E-03 |
| 36 | GO:0003727: single-stranded RNA binding | 8.80E-03 |
| 37 | GO:0047134: protein-disulfide reductase activity | 9.31E-03 |
| 38 | GO:0004812: aminoacyl-tRNA ligase activity | 9.31E-03 |
| 39 | GO:0050662: coenzyme binding | 1.09E-02 |
| 40 | GO:0004791: thioredoxin-disulfide reductase activity | 1.09E-02 |
| 41 | GO:0003743: translation initiation factor activity | 1.15E-02 |
| 42 | GO:0004518: nuclease activity | 1.26E-02 |
| 43 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.32E-02 |
| 44 | GO:0008483: transaminase activity | 1.44E-02 |
| 45 | GO:0008236: serine-type peptidase activity | 1.82E-02 |
| 46 | GO:0008233: peptidase activity | 1.87E-02 |
| 47 | GO:0030145: manganese ion binding | 2.09E-02 |
| 48 | GO:0046872: metal ion binding | 2.17E-02 |
| 49 | GO:0003993: acid phosphatase activity | 2.30E-02 |
| 50 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.98E-02 |
| 51 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.98E-02 |
| 52 | GO:0051082: unfolded protein binding | 4.24E-02 |
| 53 | GO:0015035: protein disulfide oxidoreductase activity | 4.33E-02 |
| 54 | GO:0003729: mRNA binding | 4.48E-02 |
| 55 | GO:0016758: transferase activity, transferring hexosyl groups | 4.88E-02 |
| 56 | GO:0019843: rRNA binding | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 2 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 3 | GO:0009534: chloroplast thylakoid | 4.49E-23 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 3.33E-20 |
| 5 | GO:0009507: chloroplast | 4.38E-19 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 3.02E-15 |
| 7 | GO:0030095: chloroplast photosystem II | 8.89E-10 |
| 8 | GO:0009941: chloroplast envelope | 2.82E-09 |
| 9 | GO:0009570: chloroplast stroma | 2.92E-09 |
| 10 | GO:0009579: thylakoid | 1.03E-07 |
| 11 | GO:0009533: chloroplast stromal thylakoid | 5.44E-07 |
| 12 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.76E-06 |
| 13 | GO:0009523: photosystem II | 5.83E-05 |
| 14 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.22E-04 |
| 15 | GO:0009782: photosystem I antenna complex | 1.22E-04 |
| 16 | GO:0042651: thylakoid membrane | 4.61E-04 |
| 17 | GO:0009654: photosystem II oxygen evolving complex | 4.61E-04 |
| 18 | GO:0009531: secondary cell wall | 6.66E-04 |
| 19 | GO:0019898: extrinsic component of membrane | 9.36E-04 |
| 20 | GO:0009538: photosystem I reaction center | 2.22E-03 |
| 21 | GO:0031977: thylakoid lumen | 2.76E-03 |
| 22 | GO:0008180: COP9 signalosome | 2.87E-03 |
| 23 | GO:0042644: chloroplast nucleoid | 2.87E-03 |
| 24 | GO:0032040: small-subunit processome | 4.32E-03 |
| 25 | GO:0009508: plastid chromosome | 4.71E-03 |
| 26 | GO:0030076: light-harvesting complex | 5.54E-03 |
| 27 | GO:0010287: plastoglobule | 6.76E-03 |
| 28 | GO:0009295: nucleoid | 1.44E-02 |
| 29 | GO:0030529: intracellular ribonucleoprotein complex | 1.56E-02 |
| 30 | GO:0019005: SCF ubiquitin ligase complex | 1.88E-02 |
| 31 | GO:0031969: chloroplast membrane | 1.90E-02 |
| 32 | GO:0043231: intracellular membrane-bounded organelle | 3.09E-02 |
| 33 | GO:0000502: proteasome complex | 3.30E-02 |
| 34 | GO:0009505: plant-type cell wall | 3.63E-02 |
| 35 | GO:0009706: chloroplast inner membrane | 4.24E-02 |
| 36 | GO:0048046: apoplast | 4.76E-02 |