GO Enrichment Analysis of Co-expressed Genes with
AT1G70780
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1905499: trichome papilla formation | 0.00E+00 |
| 2 | GO:0006437: tyrosyl-tRNA aminoacylation | 0.00E+00 |
| 3 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 4 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 5 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 6 | GO:0097164: ammonium ion metabolic process | 0.00E+00 |
| 7 | GO:0006223: uracil salvage | 0.00E+00 |
| 8 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 9 | GO:0008616: queuosine biosynthetic process | 5.31E-07 |
| 10 | GO:0032544: plastid translation | 7.24E-05 |
| 11 | GO:0010027: thylakoid membrane organization | 7.73E-05 |
| 12 | GO:0042371: vitamin K biosynthetic process | 1.00E-04 |
| 13 | GO:0043686: co-translational protein modification | 1.00E-04 |
| 14 | GO:0019354: siroheme biosynthetic process | 1.00E-04 |
| 15 | GO:0009443: pyridoxal 5'-phosphate salvage | 1.00E-04 |
| 16 | GO:0006633: fatty acid biosynthetic process | 1.08E-04 |
| 17 | GO:0006529: asparagine biosynthetic process | 2.36E-04 |
| 18 | GO:0006568: tryptophan metabolic process | 2.36E-04 |
| 19 | GO:0007000: nucleolus organization | 2.36E-04 |
| 20 | GO:0043039: tRNA aminoacylation | 2.36E-04 |
| 21 | GO:0070981: L-asparagine biosynthetic process | 2.36E-04 |
| 22 | GO:0019344: cysteine biosynthetic process | 3.24E-04 |
| 23 | GO:0051211: anisotropic cell growth | 3.92E-04 |
| 24 | GO:0000280: nuclear division | 3.92E-04 |
| 25 | GO:0090391: granum assembly | 3.92E-04 |
| 26 | GO:0051604: protein maturation | 3.92E-04 |
| 27 | GO:0006241: CTP biosynthetic process | 5.64E-04 |
| 28 | GO:0006165: nucleoside diphosphate phosphorylation | 5.64E-04 |
| 29 | GO:0006228: UTP biosynthetic process | 5.64E-04 |
| 30 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 5.64E-04 |
| 31 | GO:0050482: arachidonic acid secretion | 5.64E-04 |
| 32 | GO:0042335: cuticle development | 5.95E-04 |
| 33 | GO:0006183: GTP biosynthetic process | 7.50E-04 |
| 34 | GO:0030007: cellular potassium ion homeostasis | 7.50E-04 |
| 35 | GO:0044206: UMP salvage | 7.50E-04 |
| 36 | GO:0032502: developmental process | 8.35E-04 |
| 37 | GO:0031365: N-terminal protein amino acid modification | 9.47E-04 |
| 38 | GO:0006665: sphingolipid metabolic process | 9.47E-04 |
| 39 | GO:0043097: pyrimidine nucleoside salvage | 9.47E-04 |
| 40 | GO:0010236: plastoquinone biosynthetic process | 9.47E-04 |
| 41 | GO:0000910: cytokinesis | 1.05E-03 |
| 42 | GO:0006206: pyrimidine nucleobase metabolic process | 1.16E-03 |
| 43 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.16E-03 |
| 44 | GO:0010190: cytochrome b6f complex assembly | 1.16E-03 |
| 45 | GO:0010019: chloroplast-nucleus signaling pathway | 1.38E-03 |
| 46 | GO:0010555: response to mannitol | 1.38E-03 |
| 47 | GO:0042372: phylloquinone biosynthetic process | 1.38E-03 |
| 48 | GO:0048280: vesicle fusion with Golgi apparatus | 1.38E-03 |
| 49 | GO:0009735: response to cytokinin | 1.41E-03 |
| 50 | GO:0009772: photosynthetic electron transport in photosystem II | 1.62E-03 |
| 51 | GO:0010196: nonphotochemical quenching | 1.62E-03 |
| 52 | GO:0009658: chloroplast organization | 1.83E-03 |
| 53 | GO:0006644: phospholipid metabolic process | 1.87E-03 |
| 54 | GO:0009642: response to light intensity | 1.87E-03 |
| 55 | GO:0042255: ribosome assembly | 1.87E-03 |
| 56 | GO:0006353: DNA-templated transcription, termination | 1.87E-03 |
| 57 | GO:0006875: cellular metal ion homeostasis | 1.87E-03 |
| 58 | GO:0017004: cytochrome complex assembly | 2.14E-03 |
| 59 | GO:0034765: regulation of ion transmembrane transport | 2.41E-03 |
| 60 | GO:0006783: heme biosynthetic process | 2.41E-03 |
| 61 | GO:0006779: porphyrin-containing compound biosynthetic process | 2.70E-03 |
| 62 | GO:0042761: very long-chain fatty acid biosynthetic process | 2.70E-03 |
| 63 | GO:0006896: Golgi to vacuole transport | 3.00E-03 |
| 64 | GO:0006782: protoporphyrinogen IX biosynthetic process | 3.00E-03 |
| 65 | GO:0006535: cysteine biosynthetic process from serine | 3.00E-03 |
| 66 | GO:0045454: cell redox homeostasis | 3.01E-03 |
| 67 | GO:0000038: very long-chain fatty acid metabolic process | 3.31E-03 |
| 68 | GO:0006415: translational termination | 3.31E-03 |
| 69 | GO:0016024: CDP-diacylglycerol biosynthetic process | 3.63E-03 |
| 70 | GO:0045037: protein import into chloroplast stroma | 3.63E-03 |
| 71 | GO:0006541: glutamine metabolic process | 4.30E-03 |
| 72 | GO:0010207: photosystem II assembly | 4.30E-03 |
| 73 | GO:0008152: metabolic process | 4.44E-03 |
| 74 | GO:0010167: response to nitrate | 4.64E-03 |
| 75 | GO:0010025: wax biosynthetic process | 5.00E-03 |
| 76 | GO:0009116: nucleoside metabolic process | 5.37E-03 |
| 77 | GO:0006418: tRNA aminoacylation for protein translation | 5.75E-03 |
| 78 | GO:0043622: cortical microtubule organization | 5.75E-03 |
| 79 | GO:0007017: microtubule-based process | 5.75E-03 |
| 80 | GO:0051260: protein homooligomerization | 6.14E-03 |
| 81 | GO:0009411: response to UV | 6.94E-03 |
| 82 | GO:0010091: trichome branching | 7.35E-03 |
| 83 | GO:0016117: carotenoid biosynthetic process | 7.78E-03 |
| 84 | GO:0042147: retrograde transport, endosome to Golgi | 7.78E-03 |
| 85 | GO:0000413: protein peptidyl-prolyl isomerization | 8.21E-03 |
| 86 | GO:0009646: response to absence of light | 9.10E-03 |
| 87 | GO:0008654: phospholipid biosynthetic process | 9.56E-03 |
| 88 | GO:0006623: protein targeting to vacuole | 9.56E-03 |
| 89 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.00E-02 |
| 90 | GO:0006457: protein folding | 1.13E-02 |
| 91 | GO:0009567: double fertilization forming a zygote and endosperm | 1.15E-02 |
| 92 | GO:0042254: ribosome biogenesis | 1.20E-02 |
| 93 | GO:0071805: potassium ion transmembrane transport | 1.20E-02 |
| 94 | GO:0010029: regulation of seed germination | 1.35E-02 |
| 95 | GO:0042128: nitrate assimilation | 1.40E-02 |
| 96 | GO:0015995: chlorophyll biosynthetic process | 1.46E-02 |
| 97 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.46E-02 |
| 98 | GO:0009817: defense response to fungus, incompatible interaction | 1.57E-02 |
| 99 | GO:0009813: flavonoid biosynthetic process | 1.62E-02 |
| 100 | GO:0015979: photosynthesis | 1.67E-02 |
| 101 | GO:0009407: toxin catabolic process | 1.68E-02 |
| 102 | GO:0010119: regulation of stomatal movement | 1.74E-02 |
| 103 | GO:0016051: carbohydrate biosynthetic process | 1.86E-02 |
| 104 | GO:0006412: translation | 1.91E-02 |
| 105 | GO:0006631: fatty acid metabolic process | 2.10E-02 |
| 106 | GO:0042542: response to hydrogen peroxide | 2.16E-02 |
| 107 | GO:0009636: response to toxic substance | 2.41E-02 |
| 108 | GO:0042538: hyperosmotic salinity response | 2.61E-02 |
| 109 | GO:0015031: protein transport | 2.68E-02 |
| 110 | GO:0009585: red, far-red light phototransduction | 2.75E-02 |
| 111 | GO:0006096: glycolytic process | 3.09E-02 |
| 112 | GO:0009742: brassinosteroid mediated signaling pathway | 3.68E-02 |
| 113 | GO:0045893: positive regulation of transcription, DNA-templated | 4.40E-02 |
| 114 | GO:0016036: cellular response to phosphate starvation | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity | 0.00E+00 |
| 2 | GO:0047889: ferredoxin-nitrate reductase activity | 0.00E+00 |
| 3 | GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity | 0.00E+00 |
| 4 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 5 | GO:0015269: calcium-activated potassium channel activity | 0.00E+00 |
| 6 | GO:0000979: RNA polymerase II core promoter sequence-specific DNA binding | 0.00E+00 |
| 7 | GO:0004851: uroporphyrin-III C-methyltransferase activity | 0.00E+00 |
| 8 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 9 | GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity | 0.00E+00 |
| 10 | GO:0048307: ferredoxin-nitrite reductase activity | 0.00E+00 |
| 11 | GO:0050421: nitrite reductase (NO-forming) activity | 0.00E+00 |
| 12 | GO:0008479: queuine tRNA-ribosyltransferase activity | 5.31E-07 |
| 13 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 1.00E-04 |
| 14 | GO:0004560: alpha-L-fucosidase activity | 1.00E-04 |
| 15 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 1.00E-04 |
| 16 | GO:0004831: tyrosine-tRNA ligase activity | 1.00E-04 |
| 17 | GO:0004071: aspartate-ammonia ligase activity | 1.00E-04 |
| 18 | GO:0004853: uroporphyrinogen decarboxylase activity | 1.00E-04 |
| 19 | GO:0042586: peptide deformylase activity | 1.00E-04 |
| 20 | GO:0015088: copper uptake transmembrane transporter activity | 1.00E-04 |
| 21 | GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity | 2.36E-04 |
| 22 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 2.36E-04 |
| 23 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 2.91E-04 |
| 24 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 2.91E-04 |
| 25 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 2.91E-04 |
| 26 | GO:0070402: NADPH binding | 3.92E-04 |
| 27 | GO:0005504: fatty acid binding | 3.92E-04 |
| 28 | GO:0004751: ribose-5-phosphate isomerase activity | 3.92E-04 |
| 29 | GO:0004550: nucleoside diphosphate kinase activity | 5.64E-04 |
| 30 | GO:0008097: 5S rRNA binding | 5.64E-04 |
| 31 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 5.64E-04 |
| 32 | GO:0048487: beta-tubulin binding | 5.64E-04 |
| 33 | GO:0016149: translation release factor activity, codon specific | 5.64E-04 |
| 34 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 5.64E-04 |
| 35 | GO:0004659: prenyltransferase activity | 7.50E-04 |
| 36 | GO:0004845: uracil phosphoribosyltransferase activity | 7.50E-04 |
| 37 | GO:0045430: chalcone isomerase activity | 7.50E-04 |
| 38 | GO:0009922: fatty acid elongase activity | 9.47E-04 |
| 39 | GO:0004040: amidase activity | 9.47E-04 |
| 40 | GO:0030414: peptidase inhibitor activity | 9.47E-04 |
| 41 | GO:0004623: phospholipase A2 activity | 9.47E-04 |
| 42 | GO:0015271: outward rectifier potassium channel activity | 1.16E-03 |
| 43 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.16E-03 |
| 44 | GO:0004124: cysteine synthase activity | 1.38E-03 |
| 45 | GO:0004849: uridine kinase activity | 1.38E-03 |
| 46 | GO:0043295: glutathione binding | 1.62E-03 |
| 47 | GO:0004033: aldo-keto reductase (NADP) activity | 1.87E-03 |
| 48 | GO:0005267: potassium channel activity | 2.14E-03 |
| 49 | GO:0003747: translation release factor activity | 2.41E-03 |
| 50 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 2.41E-03 |
| 51 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.70E-03 |
| 52 | GO:0005381: iron ion transmembrane transporter activity | 2.70E-03 |
| 53 | GO:0015020: glucuronosyltransferase activity | 3.00E-03 |
| 54 | GO:0008794: arsenate reductase (glutaredoxin) activity | 3.31E-03 |
| 55 | GO:0031072: heat shock protein binding | 3.95E-03 |
| 56 | GO:0009055: electron carrier activity | 4.29E-03 |
| 57 | GO:0005216: ion channel activity | 5.75E-03 |
| 58 | GO:0003727: single-stranded RNA binding | 7.35E-03 |
| 59 | GO:0004812: aminoacyl-tRNA ligase activity | 7.78E-03 |
| 60 | GO:0016740: transferase activity | 1.05E-02 |
| 61 | GO:0005200: structural constituent of cytoskeleton | 1.20E-02 |
| 62 | GO:0008375: acetylglucosaminyltransferase activity | 1.40E-02 |
| 63 | GO:0008236: serine-type peptidase activity | 1.51E-02 |
| 64 | GO:0052689: carboxylic ester hydrolase activity | 1.62E-02 |
| 65 | GO:0005509: calcium ion binding | 1.79E-02 |
| 66 | GO:0042803: protein homodimerization activity | 1.84E-02 |
| 67 | GO:0000149: SNARE binding | 1.97E-02 |
| 68 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.03E-02 |
| 69 | GO:0004364: glutathione transferase activity | 2.16E-02 |
| 70 | GO:0005484: SNAP receptor activity | 2.22E-02 |
| 71 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.35E-02 |
| 72 | GO:0003690: double-stranded DNA binding | 2.81E-02 |
| 73 | GO:0004650: polygalacturonase activity | 3.31E-02 |
| 74 | GO:0051082: unfolded protein binding | 3.53E-02 |
| 75 | GO:0015035: protein disulfide oxidoreductase activity | 3.61E-02 |
| 76 | GO:0016758: transferase activity, transferring hexosyl groups | 4.06E-02 |
| 77 | GO:0019843: rRNA binding | 4.14E-02 |
| 78 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.22E-02 |
| 79 | GO:0030170: pyridoxal phosphate binding | 4.46E-02 |
| 80 | GO:0003735: structural constituent of ribosome | 4.66E-02 |
| 81 | GO:0008565: protein transporter activity | 4.70E-02 |
| 82 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.28E-25 |
| 2 | GO:0009570: chloroplast stroma | 2.18E-20 |
| 3 | GO:0009941: chloroplast envelope | 4.51E-10 |
| 4 | GO:0009579: thylakoid | 3.29E-08 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 9.12E-08 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 3.94E-06 |
| 7 | GO:0031977: thylakoid lumen | 1.07E-05 |
| 8 | GO:0009923: fatty acid elongase complex | 1.00E-04 |
| 9 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 1.00E-04 |
| 10 | GO:0009515: granal stacked thylakoid | 1.00E-04 |
| 11 | GO:0009654: photosystem II oxygen evolving complex | 3.58E-04 |
| 12 | GO:0009509: chromoplast | 3.92E-04 |
| 13 | GO:0019898: extrinsic component of membrane | 7.34E-04 |
| 14 | GO:0031897: Tic complex | 7.50E-04 |
| 15 | GO:0009526: plastid envelope | 7.50E-04 |
| 16 | GO:0055035: plastid thylakoid membrane | 9.47E-04 |
| 17 | GO:0009536: plastid | 1.54E-03 |
| 18 | GO:0012507: ER to Golgi transport vesicle membrane | 1.87E-03 |
| 19 | GO:0009534: chloroplast thylakoid | 2.16E-03 |
| 20 | GO:0031969: chloroplast membrane | 2.40E-03 |
| 21 | GO:0045298: tubulin complex | 2.41E-03 |
| 22 | GO:0048046: apoplast | 3.06E-03 |
| 23 | GO:0009508: plastid chromosome | 3.95E-03 |
| 24 | GO:0031410: cytoplasmic vesicle | 6.54E-03 |
| 25 | GO:0009504: cell plate | 9.56E-03 |
| 26 | GO:0046658: anchored component of plasma membrane | 1.01E-02 |
| 27 | GO:0009295: nucleoid | 1.20E-02 |
| 28 | GO:0009707: chloroplast outer membrane | 1.57E-02 |
| 29 | GO:0031201: SNARE complex | 2.10E-02 |
| 30 | GO:0031902: late endosome membrane | 2.10E-02 |
| 31 | GO:0005840: ribosome | 2.11E-02 |
| 32 | GO:0009706: chloroplast inner membrane | 3.53E-02 |
| 33 | GO:0022626: cytosolic ribosome | 3.68E-02 |
| 34 | GO:0005618: cell wall | 3.71E-02 |