GO Enrichment Analysis of Co-expressed Genes with
AT1G70200
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 2 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 3 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 4 | GO:0006412: translation | 6.02E-11 |
| 5 | GO:0043489: RNA stabilization | 5.79E-05 |
| 6 | GO:1904966: positive regulation of vitamin E biosynthetic process | 5.79E-05 |
| 7 | GO:1904964: positive regulation of phytol biosynthetic process | 5.79E-05 |
| 8 | GO:0042371: vitamin K biosynthetic process | 5.79E-05 |
| 9 | GO:1902458: positive regulation of stomatal opening | 5.79E-05 |
| 10 | GO:0034337: RNA folding | 5.79E-05 |
| 11 | GO:0009658: chloroplast organization | 7.41E-05 |
| 12 | GO:0042254: ribosome biogenesis | 7.69E-05 |
| 13 | GO:0009409: response to cold | 8.06E-05 |
| 14 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.35E-04 |
| 15 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.41E-04 |
| 16 | GO:0034755: iron ion transmembrane transport | 1.41E-04 |
| 17 | GO:1900871: chloroplast mRNA modification | 1.41E-04 |
| 18 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 1.41E-04 |
| 19 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.41E-04 |
| 20 | GO:0006954: inflammatory response | 2.40E-04 |
| 21 | GO:0009793: embryo development ending in seed dormancy | 2.76E-04 |
| 22 | GO:0009790: embryo development | 3.42E-04 |
| 23 | GO:0006165: nucleoside diphosphate phosphorylation | 3.49E-04 |
| 24 | GO:0006228: UTP biosynthetic process | 3.49E-04 |
| 25 | GO:2001141: regulation of RNA biosynthetic process | 3.49E-04 |
| 26 | GO:0006241: CTP biosynthetic process | 3.49E-04 |
| 27 | GO:0006183: GTP biosynthetic process | 4.66E-04 |
| 28 | GO:0010027: thylakoid membrane organization | 5.54E-04 |
| 29 | GO:0032543: mitochondrial translation | 5.92E-04 |
| 30 | GO:0045038: protein import into chloroplast thylakoid membrane | 5.92E-04 |
| 31 | GO:0009247: glycolipid biosynthetic process | 5.92E-04 |
| 32 | GO:0015995: chlorophyll biosynthetic process | 6.49E-04 |
| 33 | GO:0032973: amino acid export | 7.24E-04 |
| 34 | GO:0042549: photosystem II stabilization | 7.24E-04 |
| 35 | GO:1901259: chloroplast rRNA processing | 8.63E-04 |
| 36 | GO:0045087: innate immune response | 8.97E-04 |
| 37 | GO:0043090: amino acid import | 1.01E-03 |
| 38 | GO:0019375: galactolipid biosynthetic process | 1.16E-03 |
| 39 | GO:2000070: regulation of response to water deprivation | 1.16E-03 |
| 40 | GO:0009657: plastid organization | 1.32E-03 |
| 41 | GO:0032544: plastid translation | 1.32E-03 |
| 42 | GO:0071482: cellular response to light stimulus | 1.32E-03 |
| 43 | GO:0080144: amino acid homeostasis | 1.48E-03 |
| 44 | GO:0010205: photoinhibition | 1.65E-03 |
| 45 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.65E-03 |
| 46 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.83E-03 |
| 47 | GO:0019684: photosynthesis, light reaction | 2.02E-03 |
| 48 | GO:0009089: lysine biosynthetic process via diaminopimelate | 2.02E-03 |
| 49 | GO:0009073: aromatic amino acid family biosynthetic process | 2.02E-03 |
| 50 | GO:0006879: cellular iron ion homeostasis | 2.02E-03 |
| 51 | GO:0006352: DNA-templated transcription, initiation | 2.02E-03 |
| 52 | GO:0045037: protein import into chloroplast stroma | 2.21E-03 |
| 53 | GO:0006006: glucose metabolic process | 2.41E-03 |
| 54 | GO:0019253: reductive pentose-phosphate cycle | 2.62E-03 |
| 55 | GO:0010207: photosystem II assembly | 2.62E-03 |
| 56 | GO:0031408: oxylipin biosynthetic process | 3.72E-03 |
| 57 | GO:0009451: RNA modification | 3.76E-03 |
| 58 | GO:0009411: response to UV | 4.20E-03 |
| 59 | GO:0006457: protein folding | 4.42E-03 |
| 60 | GO:0009306: protein secretion | 4.44E-03 |
| 61 | GO:0016117: carotenoid biosynthetic process | 4.69E-03 |
| 62 | GO:0000413: protein peptidyl-prolyl isomerization | 4.95E-03 |
| 63 | GO:0009741: response to brassinosteroid | 5.21E-03 |
| 64 | GO:0042742: defense response to bacterium | 7.80E-03 |
| 65 | GO:0015979: photosynthesis | 8.01E-03 |
| 66 | GO:0018298: protein-chromophore linkage | 9.36E-03 |
| 67 | GO:0009631: cold acclimation | 1.04E-02 |
| 68 | GO:0006397: mRNA processing | 1.08E-02 |
| 69 | GO:0009637: response to blue light | 1.11E-02 |
| 70 | GO:0042542: response to hydrogen peroxide | 1.28E-02 |
| 71 | GO:0010114: response to red light | 1.32E-02 |
| 72 | GO:0009744: response to sucrose | 1.32E-02 |
| 73 | GO:0051707: response to other organism | 1.32E-02 |
| 74 | GO:0009585: red, far-red light phototransduction | 1.63E-02 |
| 75 | GO:0055114: oxidation-reduction process | 1.71E-02 |
| 76 | GO:0006096: glycolytic process | 1.84E-02 |
| 77 | GO:0006396: RNA processing | 2.14E-02 |
| 78 | GO:0006633: fatty acid biosynthetic process | 2.89E-02 |
| 79 | GO:0045944: positive regulation of transcription from RNA polymerase II promoter | 4.00E-02 |
| 80 | GO:0015031: protein transport | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 2 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 3 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 4 | GO:0019843: rRNA binding | 9.61E-18 |
| 5 | GO:0003735: structural constituent of ribosome | 2.41E-12 |
| 6 | GO:0008266: poly(U) RNA binding | 1.52E-06 |
| 7 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.09E-05 |
| 8 | GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity | 5.79E-05 |
| 9 | GO:0003729: mRNA binding | 1.01E-04 |
| 10 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.01E-04 |
| 11 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 1.41E-04 |
| 12 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 1.41E-04 |
| 13 | GO:0042389: omega-3 fatty acid desaturase activity | 1.41E-04 |
| 14 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 1.41E-04 |
| 15 | GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity | 1.41E-04 |
| 16 | GO:0035250: UDP-galactosyltransferase activity | 3.49E-04 |
| 17 | GO:0004550: nucleoside diphosphate kinase activity | 3.49E-04 |
| 18 | GO:0008097: 5S rRNA binding | 3.49E-04 |
| 19 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 3.49E-04 |
| 20 | GO:0043495: protein anchor | 4.66E-04 |
| 21 | GO:0001053: plastid sigma factor activity | 4.66E-04 |
| 22 | GO:0016987: sigma factor activity | 4.66E-04 |
| 23 | GO:0003723: RNA binding | 8.99E-04 |
| 24 | GO:0019899: enzyme binding | 1.01E-03 |
| 25 | GO:0005381: iron ion transmembrane transporter activity | 1.65E-03 |
| 26 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 2.62E-03 |
| 27 | GO:0022891: substrate-specific transmembrane transporter activity | 4.20E-03 |
| 28 | GO:0010181: FMN binding | 5.48E-03 |
| 29 | GO:0016168: chlorophyll binding | 8.08E-03 |
| 30 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 9.03E-03 |
| 31 | GO:0003746: translation elongation factor activity | 1.11E-02 |
| 32 | GO:0016491: oxidoreductase activity | 1.11E-02 |
| 33 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 1.14E-02 |
| 34 | GO:0050661: NADP binding | 1.21E-02 |
| 35 | GO:0051287: NAD binding | 1.51E-02 |
| 36 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.63E-02 |
| 37 | GO:0015171: amino acid transmembrane transporter activity | 1.75E-02 |
| 38 | GO:0008026: ATP-dependent helicase activity | 2.19E-02 |
| 39 | GO:0008565: protein transporter activity | 2.80E-02 |
| 40 | GO:0008194: UDP-glycosyltransferase activity | 3.35E-02 |
| 41 | GO:0042802: identical protein binding | 3.67E-02 |
| 42 | GO:0000287: magnesium ion binding | 4.17E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.26E-31 |
| 2 | GO:0009941: chloroplast envelope | 5.00E-28 |
| 3 | GO:0009570: chloroplast stroma | 2.75E-23 |
| 4 | GO:0005840: ribosome | 1.22E-12 |
| 5 | GO:0009579: thylakoid | 1.40E-12 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 5.02E-12 |
| 7 | GO:0009534: chloroplast thylakoid | 5.75E-07 |
| 8 | GO:0000311: plastid large ribosomal subunit | 9.52E-07 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 1.71E-05 |
| 10 | GO:0009547: plastid ribosome | 5.79E-05 |
| 11 | GO:0000312: plastid small ribosomal subunit | 1.06E-04 |
| 12 | GO:0042170: plastid membrane | 1.41E-04 |
| 13 | GO:0009706: chloroplast inner membrane | 2.06E-04 |
| 14 | GO:0033281: TAT protein transport complex | 2.40E-04 |
| 15 | GO:0042646: plastid nucleoid | 3.49E-04 |
| 16 | GO:0010319: stromule | 4.95E-04 |
| 17 | GO:0030529: intracellular ribonucleoprotein complex | 5.54E-04 |
| 18 | GO:0015934: large ribosomal subunit | 8.23E-04 |
| 19 | GO:0016363: nuclear matrix | 8.63E-04 |
| 20 | GO:0005762: mitochondrial large ribosomal subunit | 8.63E-04 |
| 21 | GO:0031969: chloroplast membrane | 9.57E-04 |
| 22 | GO:0009539: photosystem II reaction center | 1.32E-03 |
| 23 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.48E-03 |
| 24 | GO:0032040: small-subunit processome | 2.21E-03 |
| 25 | GO:0042651: thylakoid membrane | 3.49E-03 |
| 26 | GO:0009654: photosystem II oxygen evolving complex | 3.49E-03 |
| 27 | GO:0015935: small ribosomal subunit | 3.72E-03 |
| 28 | GO:0022627: cytosolic small ribosomal subunit | 4.85E-03 |
| 29 | GO:0009523: photosystem II | 5.75E-03 |
| 30 | GO:0009295: nucleoid | 7.18E-03 |
| 31 | GO:0009536: plastid | 1.01E-02 |
| 32 | GO:0031977: thylakoid lumen | 1.25E-02 |
| 33 | GO:0022626: cytosolic ribosome | 1.77E-02 |
| 34 | GO:0016020: membrane | 2.30E-02 |
| 35 | GO:0005623: cell | 2.51E-02 |
| 36 | GO:0005759: mitochondrial matrix | 2.89E-02 |
| 37 | GO:0046658: anchored component of plasma membrane | 3.78E-02 |