Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G69700

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
2GO:0006223: uracil salvage0.00E+00
3GO:0010430: fatty acid omega-oxidation0.00E+00
4GO:0006642: triglyceride mobilization0.00E+00
5GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
6GO:0007638: mechanosensory behavior0.00E+00
7GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
8GO:0097164: ammonium ion metabolic process0.00E+00
9GO:0042425: choline biosynthetic process0.00E+00
10GO:0042493: response to drug0.00E+00
11GO:1905499: trichome papilla formation0.00E+00
12GO:0006437: tyrosyl-tRNA aminoacylation0.00E+00
13GO:0071555: cell wall organization2.14E-08
14GO:0006633: fatty acid biosynthetic process1.19E-05
15GO:0010411: xyloglucan metabolic process1.58E-05
16GO:0042335: cuticle development4.24E-05
17GO:0042546: cell wall biogenesis7.02E-05
18GO:0009828: plant-type cell wall loosening1.06E-04
19GO:0010207: photosystem II assembly1.41E-04
20GO:0016123: xanthophyll biosynthetic process1.63E-04
21GO:0006869: lipid transport2.17E-04
22GO:0009826: unidimensional cell growth3.11E-04
23GO:0016051: carbohydrate biosynthetic process3.43E-04
24GO:0009831: plant-type cell wall modification involved in multidimensional cell growth3.76E-04
25GO:0005980: glycogen catabolic process4.23E-04
26GO:0000032: cell wall mannoprotein biosynthetic process4.23E-04
27GO:0042759: long-chain fatty acid biosynthetic process4.23E-04
28GO:0046166: glyceraldehyde-3-phosphate biosynthetic process4.23E-04
29GO:0032025: response to cobalt ion4.23E-04
30GO:0043686: co-translational protein modification4.23E-04
31GO:0043007: maintenance of rDNA4.23E-04
32GO:1902458: positive regulation of stomatal opening4.23E-04
33GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway4.23E-04
34GO:0060627: regulation of vesicle-mediated transport4.23E-04
35GO:0009664: plant-type cell wall organization7.29E-04
36GO:0070981: L-asparagine biosynthetic process9.16E-04
37GO:0006529: asparagine biosynthetic process9.16E-04
38GO:1903426: regulation of reactive oxygen species biosynthetic process9.16E-04
39GO:0043039: tRNA aminoacylation9.16E-04
40GO:0010198: synergid death9.16E-04
41GO:0006949: syncytium formation1.01E-03
42GO:0007267: cell-cell signaling1.02E-03
43GO:0010027: thylakoid membrane organization1.18E-03
44GO:0046168: glycerol-3-phosphate catabolic process1.49E-03
45GO:0019563: glycerol catabolic process1.49E-03
46GO:0051604: protein maturation1.49E-03
47GO:0006065: UDP-glucuronate biosynthetic process1.49E-03
48GO:0032504: multicellular organism reproduction1.49E-03
49GO:0033591: response to L-ascorbic acid1.49E-03
50GO:0007568: aging1.99E-03
51GO:0010025: wax biosynthetic process2.13E-03
52GO:0009052: pentose-phosphate shunt, non-oxidative branch2.15E-03
53GO:0009650: UV protection2.15E-03
54GO:0006072: glycerol-3-phosphate metabolic process2.15E-03
55GO:0010731: protein glutathionylation2.15E-03
56GO:0051016: barbed-end actin filament capping2.15E-03
57GO:0006424: glutamyl-tRNA aminoacylation2.15E-03
58GO:0046739: transport of virus in multicellular host2.15E-03
59GO:0050482: arachidonic acid secretion2.15E-03
60GO:0009413: response to flooding2.15E-03
61GO:0009298: GDP-mannose biosynthetic process2.15E-03
62GO:0007231: osmosensory signaling pathway2.15E-03
63GO:0016998: cell wall macromolecule catabolic process2.86E-03
64GO:0033500: carbohydrate homeostasis2.89E-03
65GO:0006021: inositol biosynthetic process2.89E-03
66GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway2.89E-03
67GO:0044206: UMP salvage2.89E-03
68GO:0009956: radial pattern formation2.89E-03
69GO:0015976: carbon utilization2.89E-03
70GO:0015689: molybdate ion transport2.89E-03
71GO:0009765: photosynthesis, light harvesting2.89E-03
72GO:0006085: acetyl-CoA biosynthetic process2.89E-03
73GO:0006183: GTP biosynthetic process2.89E-03
74GO:0030245: cellulose catabolic process3.13E-03
75GO:0032543: mitochondrial translation3.71E-03
76GO:0048359: mucilage metabolic process involved in seed coat development3.71E-03
77GO:0019722: calcium-mediated signaling3.71E-03
78GO:0016120: carotene biosynthetic process3.71E-03
79GO:0006656: phosphatidylcholine biosynthetic process3.71E-03
80GO:0045038: protein import into chloroplast thylakoid membrane3.71E-03
81GO:0043097: pyrimidine nucleoside salvage3.71E-03
82GO:0031365: N-terminal protein amino acid modification3.71E-03
83GO:0006665: sphingolipid metabolic process3.71E-03
84GO:0016042: lipid catabolic process4.10E-03
85GO:0000271: polysaccharide biosynthetic process4.35E-03
86GO:0080022: primary root development4.35E-03
87GO:0000413: protein peptidyl-prolyl isomerization4.35E-03
88GO:0009117: nucleotide metabolic process4.59E-03
89GO:0006206: pyrimidine nucleobase metabolic process4.59E-03
90GO:0018258: protein O-linked glycosylation via hydroxyproline4.59E-03
91GO:0006014: D-ribose metabolic process4.59E-03
92GO:0046855: inositol phosphate dephosphorylation4.59E-03
93GO:0010405: arabinogalactan protein metabolic process4.59E-03
94GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway4.59E-03
95GO:0045489: pectin biosynthetic process4.69E-03
96GO:0010305: leaf vascular tissue pattern formation4.69E-03
97GO:0009612: response to mechanical stimulus5.53E-03
98GO:0048280: vesicle fusion with Golgi apparatus5.53E-03
99GO:0009554: megasporogenesis5.53E-03
100GO:0010555: response to mannitol5.53E-03
101GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity5.53E-03
102GO:0071554: cell wall organization or biogenesis5.80E-03
103GO:0010583: response to cyclopentenone6.20E-03
104GO:0009658: chloroplast organization6.21E-03
105GO:0009645: response to low light intensity stimulus6.54E-03
106GO:0006955: immune response6.54E-03
107GO:0048528: post-embryonic root development6.54E-03
108GO:0009642: response to light intensity7.60E-03
109GO:2000070: regulation of response to water deprivation7.60E-03
110GO:0045010: actin nucleation7.60E-03
111GO:0006644: phospholipid metabolic process7.60E-03
112GO:0016126: sterol biosynthetic process8.41E-03
113GO:0007186: G-protein coupled receptor signaling pathway8.73E-03
114GO:0010497: plasmodesmata-mediated intercellular transport8.73E-03
115GO:0032544: plastid translation8.73E-03
116GO:0009932: cell tip growth8.73E-03
117GO:0015996: chlorophyll catabolic process8.73E-03
118GO:0042128: nitrate assimilation9.40E-03
119GO:0006754: ATP biosynthetic process9.92E-03
120GO:0015780: nucleotide-sugar transport9.92E-03
121GO:0016311: dephosphorylation1.04E-02
122GO:0042761: very long-chain fatty acid biosynthetic process1.12E-02
123GO:0016573: histone acetylation1.12E-02
124GO:0005975: carbohydrate metabolic process1.22E-02
125GO:0006896: Golgi to vacuole transport1.24E-02
126GO:0009870: defense response signaling pathway, resistance gene-dependent1.24E-02
127GO:0019538: protein metabolic process1.24E-02
128GO:0043069: negative regulation of programmed cell death1.24E-02
129GO:0006415: translational termination1.38E-02
130GO:0030148: sphingolipid biosynthetic process1.38E-02
131GO:0010015: root morphogenesis1.38E-02
132GO:0000038: very long-chain fatty acid metabolic process1.38E-02
133GO:0006816: calcium ion transport1.38E-02
134GO:0016024: CDP-diacylglycerol biosynthetic process1.52E-02
135GO:0045037: protein import into chloroplast stroma1.52E-02
136GO:0006790: sulfur compound metabolic process1.52E-02
137GO:0006631: fatty acid metabolic process1.66E-02
138GO:0030036: actin cytoskeleton organization1.66E-02
139GO:0050826: response to freezing1.66E-02
140GO:0006094: gluconeogenesis1.66E-02
141GO:0007166: cell surface receptor signaling pathway1.70E-02
142GO:0010143: cutin biosynthetic process1.81E-02
143GO:0006541: glutamine metabolic process1.81E-02
144GO:0009933: meristem structural organization1.81E-02
145GO:0019253: reductive pentose-phosphate cycle1.81E-02
146GO:0009266: response to temperature stimulus1.81E-02
147GO:0019853: L-ascorbic acid biosynthetic process1.96E-02
148GO:0010167: response to nitrate1.96E-02
149GO:0070588: calcium ion transmembrane transport1.96E-02
150GO:0046854: phosphatidylinositol phosphorylation1.96E-02
151GO:0009969: xyloglucan biosynthetic process1.96E-02
152GO:0006833: water transport2.12E-02
153GO:0042538: hyperosmotic salinity response2.27E-02
154GO:0006338: chromatin remodeling2.29E-02
155GO:0051017: actin filament bundle assembly2.29E-02
156GO:0019344: cysteine biosynthetic process2.29E-02
157GO:0009116: nucleoside metabolic process2.29E-02
158GO:0006486: protein glycosylation2.44E-02
159GO:0006418: tRNA aminoacylation for protein translation2.45E-02
160GO:0007017: microtubule-based process2.45E-02
161GO:0019953: sexual reproduction2.45E-02
162GO:0031348: negative regulation of defense response2.80E-02
163GO:0006096: glycolytic process2.88E-02
164GO:0009294: DNA mediated transformation2.98E-02
165GO:0009411: response to UV2.98E-02
166GO:0010091: trichome branching3.16E-02
167GO:0009735: response to cytokinin3.19E-02
168GO:0080167: response to karrikin3.25E-02
169GO:0042147: retrograde transport, endosome to Golgi3.34E-02
170GO:0016117: carotenoid biosynthetic process3.34E-02
171GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.34E-02
172GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.39E-02
173GO:0034220: ion transmembrane transport3.54E-02
174GO:0009742: brassinosteroid mediated signaling pathway3.68E-02
175GO:0010182: sugar mediated signaling pathway3.73E-02
176GO:0009646: response to absence of light3.93E-02
177GO:0045454: cell redox homeostasis4.06E-02
178GO:0006623: protein targeting to vacuole4.13E-02
179GO:0010183: pollen tube guidance4.13E-02
180GO:0019252: starch biosynthetic process4.13E-02
181GO:0048510: regulation of timing of transition from vegetative to reproductive phase4.33E-02
182GO:0006891: intra-Golgi vesicle-mediated transport4.33E-02
183GO:0032502: developmental process4.54E-02
184GO:1901657: glycosyl compound metabolic process4.75E-02
185GO:0016125: sterol metabolic process4.96E-02
RankGO TermAdjusted P value
1GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
2GO:0004496: mevalonate kinase activity0.00E+00
3GO:0048307: ferredoxin-nitrite reductase activity0.00E+00
4GO:0050613: delta14-sterol reductase activity0.00E+00
5GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
6GO:0050421: nitrite reductase (NO-forming) activity0.00E+00
7GO:0045435: lycopene epsilon cyclase activity0.00E+00
8GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity0.00E+00
9GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
10GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
11GO:0047889: ferredoxin-nitrate reductase activity0.00E+00
12GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity0.00E+00
13GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity0.00E+00
14GO:0016762: xyloglucan:xyloglucosyl transferase activity4.01E-06
15GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity7.99E-06
16GO:0016798: hydrolase activity, acting on glycosyl bonds1.58E-05
17GO:0052689: carboxylic ester hydrolase activity1.40E-04
18GO:0008289: lipid binding1.52E-04
19GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.62E-04
20GO:0051753: mannan synthase activity3.12E-04
21GO:0042834: peptidoglycan binding4.23E-04
22GO:0080132: fatty acid alpha-hydroxylase activity4.23E-04
23GO:0004645: phosphorylase activity4.23E-04
24GO:0047560: 3-dehydrosphinganine reductase activity4.23E-04
25GO:0004831: tyrosine-tRNA ligase activity4.23E-04
26GO:0009374: biotin binding4.23E-04
27GO:0004476: mannose-6-phosphate isomerase activity4.23E-04
28GO:0004071: aspartate-ammonia ligase activity4.23E-04
29GO:0042586: peptide deformylase activity4.23E-04
30GO:0004328: formamidase activity4.23E-04
31GO:0010347: L-galactose-1-phosphate phosphatase activity4.23E-04
32GO:0047259: glucomannan 4-beta-mannosyltransferase activity4.23E-04
33GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity4.23E-04
34GO:0030794: (S)-coclaurine-N-methyltransferase activity4.23E-04
35GO:0004560: alpha-L-fucosidase activity4.23E-04
36GO:0004807: triose-phosphate isomerase activity4.23E-04
37GO:0008184: glycogen phosphorylase activity4.23E-04
38GO:0008934: inositol monophosphate 1-phosphatase activity9.16E-04
39GO:0046593: mandelonitrile lyase activity9.16E-04
40GO:0052833: inositol monophosphate 4-phosphatase activity9.16E-04
41GO:0000234: phosphoethanolamine N-methyltransferase activity9.16E-04
42GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity9.16E-04
43GO:0003938: IMP dehydrogenase activity9.16E-04
44GO:0052832: inositol monophosphate 3-phosphatase activity9.16E-04
45GO:0008378: galactosyltransferase activity1.33E-03
46GO:0005504: fatty acid binding1.49E-03
47GO:0004148: dihydrolipoyl dehydrogenase activity1.49E-03
48GO:0004751: ribose-5-phosphate isomerase activity1.49E-03
49GO:0045174: glutathione dehydrogenase (ascorbate) activity1.49E-03
50GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity1.49E-03
51GO:0003979: UDP-glucose 6-dehydrogenase activity1.49E-03
52GO:0016788: hydrolase activity, acting on ester bonds1.53E-03
53GO:0016758: transferase activity, transferring hexosyl groups1.87E-03
54GO:0035529: NADH pyrophosphatase activity2.15E-03
55GO:0016149: translation release factor activity, codon specific2.15E-03
56GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides2.15E-03
57GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity2.15E-03
58GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor2.15E-03
59GO:0016851: magnesium chelatase activity2.15E-03
60GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity2.15E-03
61GO:0003878: ATP citrate synthase activity2.15E-03
62GO:0004857: enzyme inhibitor activity2.36E-03
63GO:0045430: chalcone isomerase activity2.89E-03
64GO:0052793: pectin acetylesterase activity2.89E-03
65GO:0015098: molybdate ion transmembrane transporter activity2.89E-03
66GO:0004845: uracil phosphoribosyltransferase activity2.89E-03
67GO:0016836: hydro-lyase activity2.89E-03
68GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.13E-03
69GO:0008810: cellulase activity3.42E-03
70GO:0004623: phospholipase A2 activity3.71E-03
71GO:0004040: amidase activity3.71E-03
72GO:0003989: acetyl-CoA carboxylase activity3.71E-03
73GO:0009922: fatty acid elongase activity3.71E-03
74GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.77E-03
75GO:0016462: pyrophosphatase activity4.59E-03
76GO:0004366: glycerol-3-phosphate O-acyltransferase activity4.59E-03
77GO:0008200: ion channel inhibitor activity4.59E-03
78GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity4.59E-03
79GO:0080030: methyl indole-3-acetate esterase activity4.59E-03
80GO:1990714: hydroxyproline O-galactosyltransferase activity4.59E-03
81GO:0019901: protein kinase binding5.42E-03
82GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity5.53E-03
83GO:0004849: uridine kinase activity5.53E-03
84GO:0016832: aldehyde-lyase activity5.53E-03
85GO:0004747: ribokinase activity5.53E-03
86GO:0051920: peroxiredoxin activity5.53E-03
87GO:0043295: glutathione binding6.54E-03
88GO:0051015: actin filament binding6.61E-03
89GO:0016722: oxidoreductase activity, oxidizing metal ions7.48E-03
90GO:0052747: sinapyl alcohol dehydrogenase activity7.60E-03
91GO:0008865: fructokinase activity7.60E-03
92GO:0004714: transmembrane receptor protein tyrosine kinase activity7.60E-03
93GO:0016209: antioxidant activity7.60E-03
94GO:0016413: O-acetyltransferase activity7.94E-03
95GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism9.92E-03
96GO:0003747: translation release factor activity9.92E-03
97GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors9.92E-03
98GO:0004871: signal transducer activity1.22E-02
99GO:0015020: glucuronosyltransferase activity1.24E-02
100GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.31E-02
101GO:0047372: acylglycerol lipase activity1.38E-02
102GO:0045551: cinnamyl-alcohol dehydrogenase activity1.52E-02
103GO:0004089: carbonate dehydratase activity1.66E-02
104GO:0005262: calcium channel activity1.66E-02
105GO:0004364: glutathione transferase activity1.73E-02
106GO:0102337: 3-oxo-cerotoyl-CoA synthase activity2.12E-02
107GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity2.12E-02
108GO:0102336: 3-oxo-arachidoyl-CoA synthase activity2.12E-02
109GO:0051287: NAD binding2.19E-02
110GO:0005528: FK506 binding2.29E-02
111GO:0008324: cation transmembrane transporter activity2.45E-02
112GO:0016757: transferase activity, transferring glycosyl groups2.87E-02
113GO:0030570: pectate lyase activity2.98E-02
114GO:0008514: organic anion transmembrane transporter activity3.16E-02
115GO:0004650: polygalacturonase activity3.17E-02
116GO:0030599: pectinesterase activity3.27E-02
117GO:0004812: aminoacyl-tRNA ligase activity3.34E-02
118GO:0003713: transcription coactivator activity3.73E-02
119GO:0019843: rRNA binding4.33E-02
120GO:0016791: phosphatase activity4.96E-02
RankGO TermAdjusted P value
1GO:0005835: fatty acid synthase complex0.00E+00
2GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex0.00E+00
3GO:0031225: anchored component of membrane2.51E-14
4GO:0046658: anchored component of plasma membrane5.48E-12
5GO:0005618: cell wall2.42E-11
6GO:0048046: apoplast7.17E-11
7GO:0009570: chloroplast stroma1.02E-10
8GO:0005576: extracellular region1.73E-10
9GO:0009505: plant-type cell wall9.23E-08
10GO:0005886: plasma membrane1.49E-07
11GO:0031977: thylakoid lumen3.88E-06
12GO:0009543: chloroplast thylakoid lumen5.67E-06
13GO:0009507: chloroplast3.12E-05
14GO:0009941: chloroplast envelope4.72E-05
15GO:0009579: thylakoid1.20E-04
16GO:0009923: fatty acid elongase complex4.23E-04
17GO:0005794: Golgi apparatus1.31E-03
18GO:0010007: magnesium chelatase complex1.49E-03
19GO:0009317: acetyl-CoA carboxylase complex1.49E-03
20GO:0009528: plastid inner membrane1.49E-03
21GO:0009534: chloroplast thylakoid1.60E-03
22GO:0005875: microtubule associated complex2.13E-03
23GO:0009331: glycerol-3-phosphate dehydrogenase complex2.15E-03
24GO:0009346: citrate lyase complex2.15E-03
25GO:0016020: membrane2.20E-03
26GO:0009526: plastid envelope2.89E-03
27GO:0009527: plastid outer membrane2.89E-03
28GO:0000139: Golgi membrane3.45E-03
29GO:0055035: plastid thylakoid membrane3.71E-03
30GO:0009535: chloroplast thylakoid membrane4.41E-03
31GO:0009533: chloroplast stromal thylakoid6.54E-03
32GO:0000123: histone acetyltransferase complex6.54E-03
33GO:0009506: plasmodesma6.83E-03
34GO:0012507: ER to Golgi transport vesicle membrane7.60E-03
35GO:0046930: pore complex8.73E-03
36GO:0045298: tubulin complex9.92E-03
37GO:0030176: integral component of endoplasmic reticulum membrane1.96E-02
38GO:0009654: photosystem II oxygen evolving complex2.45E-02
39GO:0009532: plastid stroma2.62E-02
40GO:0031410: cytoplasmic vesicle2.80E-02
41GO:0015629: actin cytoskeleton2.98E-02
42GO:0009504: cell plate4.13E-02
43GO:0019898: extrinsic component of membrane4.13E-02
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Gene type



Gene DE type