co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G67970

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1900367: positive regulation of defense response to insect	0.00E+00
2	GO:0002376: immune system process	0.00E+00
3	GO:0010360: negative regulation of anion channel activity	0.00E+00
4	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
5	GO:0006983: ER overload response	0.00E+00
6	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
7	GO:0071327: cellular response to trehalose stimulus	0.00E+00
8	GO:0031349: positive regulation of defense response	2.70E-06
9	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	2.70E-06
10	GO:0010112: regulation of systemic acquired resistance	9.29E-06
11	GO:0043069: negative regulation of programmed cell death	1.66E-05
12	GO:0006952: defense response	2.04E-05
13	GO:0080142: regulation of salicylic acid biosynthetic process	4.05E-05
14	GO:0000162: tryptophan biosynthetic process	5.82E-05
15	GO:0009697: salicylic acid biosynthetic process	6.46E-05
16	GO:0006014: D-ribose metabolic process	9.47E-05
17	GO:0010942: positive regulation of cell death	9.47E-05
18	GO:0009625: response to insect	1.21E-04
19	GO:0010150: leaf senescence	1.43E-04
20	GO:0009617: response to bacterium	2.04E-04
21	GO:0042742: defense response to bacterium	2.07E-04
22	GO:0030091: protein repair	2.19E-04
23	GO:0009700: indole phytoalexin biosynthetic process	2.41E-04
24	GO:1901183: positive regulation of camalexin biosynthetic process	2.41E-04
25	GO:1902361: mitochondrial pyruvate transmembrane transport	2.41E-04
26	GO:0046244: salicylic acid catabolic process	2.41E-04
27	GO:0060862: negative regulation of floral organ abscission	2.41E-04
28	GO:0006772: thiamine metabolic process	2.41E-04
29	GO:0035266: meristem growth	2.41E-04
30	GO:0007292: female gamete generation	2.41E-04
31	GO:0006805: xenobiotic metabolic process	2.41E-04
32	GO:0000302: response to reactive oxygen species	2.56E-04
33	GO:0006468: protein phosphorylation	2.96E-04
34	GO:1900426: positive regulation of defense response to bacterium	3.89E-04
35	GO:0009816: defense response to bacterium, incompatible interaction	4.50E-04
36	GO:0043066: negative regulation of apoptotic process	5.34E-04
37	GO:0051788: response to misfolded protein	5.34E-04
38	GO:0006850: mitochondrial pyruvate transport	5.34E-04
39	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	5.34E-04
40	GO:0019441: tryptophan catabolic process to kynurenine	5.34E-04
41	GO:0010618: aerenchyma formation	5.34E-04
42	GO:0046686: response to cadmium ion	6.44E-04
43	GO:0045454: cell redox homeostasis	6.89E-04
44	GO:0002237: response to molecule of bacterial origin	7.67E-04
45	GO:0010053: root epidermal cell differentiation	8.57E-04
46	GO:0002230: positive regulation of defense response to virus by host	8.68E-04
47	GO:0010359: regulation of anion channel activity	8.68E-04
48	GO:0080055: low-affinity nitrate transport	8.68E-04
49	GO:0060968: regulation of gene silencing	8.68E-04
50	GO:0034976: response to endoplasmic reticulum stress	9.50E-04
51	GO:0009863: salicylic acid mediated signaling pathway	1.05E-03
52	GO:0051707: response to other organism	1.09E-03
53	GO:0009399: nitrogen fixation	1.24E-03
54	GO:1902290: positive regulation of defense response to oomycetes	1.24E-03
55	GO:0001676: long-chain fatty acid metabolic process	1.24E-03
56	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.24E-03
57	GO:0048194: Golgi vesicle budding	1.24E-03
58	GO:0007231: osmosensory signaling pathway	1.24E-03
59	GO:2001289: lipid X metabolic process	1.24E-03
60	GO:0002239: response to oomycetes	1.24E-03
61	GO:0031348: negative regulation of defense response	1.38E-03
62	GO:0071456: cellular response to hypoxia	1.38E-03
63	GO:0033500: carbohydrate homeostasis	1.65E-03
64	GO:0010188: response to microbial phytotoxin	1.65E-03
65	GO:0006542: glutamine biosynthetic process	1.65E-03
66	GO:0070534: protein K63-linked ubiquitination	1.65E-03
67	GO:0048830: adventitious root development	1.65E-03
68	GO:0000304: response to singlet oxygen	2.11E-03
69	GO:0006090: pyruvate metabolic process	2.11E-03
70	GO:0005513: detection of calcium ion	2.11E-03
71	GO:0009229: thiamine diphosphate biosynthetic process	2.11E-03
72	GO:0010225: response to UV-C	2.11E-03
73	GO:0019252: starch biosynthetic process	2.37E-03
74	GO:0010200: response to chitin	2.55E-03
75	GO:1902456: regulation of stomatal opening	2.60E-03
76	GO:1900425: negative regulation of defense response to bacterium	2.60E-03
77	GO:0009759: indole glucosinolate biosynthetic process	2.60E-03
78	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	2.60E-03
79	GO:0006301: postreplication repair	2.60E-03
80	GO:0006751: glutathione catabolic process	2.60E-03
81	GO:0048827: phyllome development	2.60E-03
82	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	2.60E-03
83	GO:0048232: male gamete generation	2.60E-03
84	GO:0043248: proteasome assembly	2.60E-03
85	GO:0006979: response to oxidative stress	2.80E-03
86	GO:0055114: oxidation-reduction process	3.11E-03
87	GO:0009612: response to mechanical stimulus	3.12E-03
88	GO:0006694: steroid biosynthetic process	3.12E-03
89	GO:0010310: regulation of hydrogen peroxide metabolic process	3.12E-03
90	GO:1900057: positive regulation of leaf senescence	3.68E-03
91	GO:1902074: response to salt	3.68E-03
92	GO:0050790: regulation of catalytic activity	3.68E-03
93	GO:0043090: amino acid import	3.68E-03
94	GO:0009627: systemic acquired resistance	4.08E-03
95	GO:0042128: nitrate assimilation	4.08E-03
96	GO:0009737: response to abscisic acid	4.13E-03
97	GO:0009787: regulation of abscisic acid-activated signaling pathway	4.27E-03
98	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.27E-03
99	GO:0009819: drought recovery	4.27E-03
100	GO:1900150: regulation of defense response to fungus	4.27E-03
101	GO:0010078: maintenance of root meristem identity	4.27E-03
102	GO:2000070: regulation of response to water deprivation	4.27E-03
103	GO:0006102: isocitrate metabolic process	4.27E-03
104	GO:0016559: peroxisome fission	4.27E-03
105	GO:0008219: cell death	4.77E-03
106	GO:0010120: camalexin biosynthetic process	4.89E-03
107	GO:0030968: endoplasmic reticulum unfolded protein response	4.89E-03
108	GO:0043562: cellular response to nitrogen levels	4.89E-03
109	GO:2000031: regulation of salicylic acid mediated signaling pathway	4.89E-03
110	GO:0006002: fructose 6-phosphate metabolic process	4.89E-03
111	GO:0006499: N-terminal protein myristoylation	5.26E-03
112	GO:0010043: response to zinc ion	5.51E-03
113	GO:0009051: pentose-phosphate shunt, oxidative branch	5.54E-03
114	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	5.70E-03
115	GO:0007166: cell surface receptor signaling pathway	5.86E-03
116	GO:0045087: innate immune response	6.04E-03
117	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.21E-03
118	GO:0010205: photoinhibition	6.21E-03
119	GO:0043067: regulation of programmed cell death	6.21E-03
120	GO:0006099: tricarboxylic acid cycle	6.32E-03
121	GO:0048829: root cap development	6.92E-03
122	GO:0009641: shade avoidance	6.92E-03
123	GO:0009682: induced systemic resistance	7.65E-03
124	GO:0052544: defense response by callose deposition in cell wall	7.65E-03
125	GO:0072593: reactive oxygen species metabolic process	7.65E-03
126	GO:0009684: indoleacetic acid biosynthetic process	7.65E-03
127	GO:0010015: root morphogenesis	7.65E-03
128	GO:0000038: very long-chain fatty acid metabolic process	7.65E-03
129	GO:0015706: nitrate transport	8.41E-03
130	GO:0002213: defense response to insect	8.41E-03
131	GO:0010105: negative regulation of ethylene-activated signaling pathway	8.41E-03
132	GO:0000266: mitochondrial fission	8.41E-03
133	GO:0050832: defense response to fungus	8.44E-03
134	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	9.20E-03
135	GO:0006108: malate metabolic process	9.20E-03
136	GO:0009933: meristem structural organization	1.00E-02
137	GO:0051603: proteolysis involved in cellular protein catabolic process	1.09E-02
138	GO:0010039: response to iron ion	1.09E-02
139	GO:0090351: seedling development	1.09E-02
140	GO:0009651: response to salt stress	1.09E-02
141	GO:0009969: xyloglucan biosynthetic process	1.09E-02
142	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.18E-02
143	GO:0006096: glycolytic process	1.25E-02
144	GO:2000377: regulation of reactive oxygen species metabolic process	1.26E-02
145	GO:0009626: plant-type hypersensitive response	1.33E-02
146	GO:0006825: copper ion transport	1.35E-02
147	GO:0009620: response to fungus	1.37E-02
148	GO:0051260: protein homooligomerization	1.45E-02
149	GO:0009814: defense response, incompatible interaction	1.54E-02
150	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.54E-02
151	GO:0030433: ubiquitin-dependent ERAD pathway	1.54E-02
152	GO:0007005: mitochondrion organization	1.54E-02
153	GO:0019748: secondary metabolic process	1.54E-02
154	GO:0009411: response to UV	1.64E-02
155	GO:0006012: galactose metabolic process	1.64E-02
156	GO:0006511: ubiquitin-dependent protein catabolic process	1.66E-02
157	GO:0010584: pollen exine formation	1.74E-02
158	GO:0009751: response to salicylic acid	1.82E-02
159	GO:0009408: response to heat	1.86E-02
160	GO:0000413: protein peptidyl-prolyl isomerization	1.95E-02
161	GO:0042631: cellular response to water deprivation	1.95E-02
162	GO:0006885: regulation of pH	2.05E-02
163	GO:0006662: glycerol ether metabolic process	2.05E-02
164	GO:0009646: response to absence of light	2.16E-02
165	GO:0009790: embryo development	2.20E-02
166	GO:0006623: protein targeting to vacuole	2.27E-02
167	GO:0002229: defense response to oomycetes	2.38E-02
168	GO:0010193: response to ozone	2.38E-02
169	GO:0006508: proteolysis	2.43E-02
170	GO:0016032: viral process	2.50E-02
171	GO:0007264: small GTPase mediated signal transduction	2.50E-02
172	GO:0030163: protein catabolic process	2.62E-02
173	GO:0009414: response to water deprivation	2.89E-02
174	GO:0001666: response to hypoxia	3.10E-02
175	GO:0009607: response to biotic stimulus	3.23E-02
176	GO:0009738: abscisic acid-activated signaling pathway	3.65E-02
177	GO:0010311: lateral root formation	3.88E-02
178	GO:0009407: toxin catabolic process	4.01E-02
179	GO:0048527: lateral root development	4.15E-02
180	GO:0010119: regulation of stomatal movement	4.15E-02
181	GO:0007568: aging	4.15E-02
182	GO:0006865: amino acid transport	4.29E-02
183	GO:0016051: carbohydrate biosynthetic process	4.43E-02
184	GO:0034599: cellular response to oxidative stress	4.57E-02
185	GO:0009409: response to cold	4.64E-02
186	GO:0080167: response to karrikin	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
2	GO:0016301: kinase activity	3.92E-05
3	GO:0004747: ribokinase activity	1.30E-04
4	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	1.30E-04
5	GO:0005509: calcium ion binding	1.65E-04
6	GO:0008320: protein transmembrane transporter activity	1.72E-04
7	GO:0008865: fructokinase activity	2.19E-04
8	GO:0004112: cyclic-nucleotide phosphodiesterase activity	2.41E-04
9	GO:0004048: anthranilate phosphoribosyltransferase activity	2.41E-04
10	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	2.41E-04
11	GO:0004788: thiamine diphosphokinase activity	2.41E-04
12	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.41E-04
13	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.41E-04
14	GO:0004713: protein tyrosine kinase activity	4.55E-04
15	GO:0004674: protein serine/threonine kinase activity	5.25E-04
16	GO:0004061: arylformamidase activity	5.34E-04
17	GO:0004190: aspartic-type endopeptidase activity	8.57E-04
18	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	8.68E-04
19	GO:0004557: alpha-galactosidase activity	8.68E-04
20	GO:0003840: gamma-glutamyltransferase activity	8.68E-04
21	GO:0050833: pyruvate transmembrane transporter activity	8.68E-04
22	GO:0036374: glutathione hydrolase activity	8.68E-04
23	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	8.68E-04
24	GO:0052692: raffinose alpha-galactosidase activity	8.68E-04
25	GO:0080054: low-affinity nitrate transmembrane transporter activity	8.68E-04
26	GO:0008430: selenium binding	8.68E-04
27	GO:0016531: copper chaperone activity	8.68E-04
28	GO:0016174: NAD(P)H oxidase activity	8.68E-04
29	GO:0005524: ATP binding	9.02E-04
30	GO:0035529: NADH pyrophosphatase activity	1.24E-03
31	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.24E-03
32	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.24E-03
33	GO:0004298: threonine-type endopeptidase activity	1.27E-03
34	GO:0003756: protein disulfide isomerase activity	1.63E-03
35	GO:0004470: malic enzyme activity	1.65E-03
36	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	1.65E-03
37	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	1.65E-03
38	GO:0008948: oxaloacetate decarboxylase activity	2.11E-03
39	GO:0005496: steroid binding	2.11E-03
40	GO:0047631: ADP-ribose diphosphatase activity	2.11E-03
41	GO:0004356: glutamate-ammonia ligase activity	2.11E-03
42	GO:0000210: NAD+ diphosphatase activity	2.60E-03
43	GO:0036402: proteasome-activating ATPase activity	2.60E-03
44	GO:0061630: ubiquitin protein ligase activity	2.61E-03
45	GO:0102391: decanoate--CoA ligase activity	3.12E-03
46	GO:0004012: phospholipid-translocating ATPase activity	3.12E-03
47	GO:0004602: glutathione peroxidase activity	3.12E-03
48	GO:0004656: procollagen-proline 4-dioxygenase activity	3.12E-03
49	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	3.12E-03
50	GO:0003872: 6-phosphofructokinase activity	3.68E-03
51	GO:0043295: glutathione binding	3.68E-03
52	GO:0004467: long-chain fatty acid-CoA ligase activity	3.68E-03
53	GO:0004714: transmembrane receptor protein tyrosine kinase activity	4.27E-03
54	GO:0004034: aldose 1-epimerase activity	4.27E-03
55	GO:0004806: triglyceride lipase activity	4.31E-03
56	GO:0004683: calmodulin-dependent protein kinase activity	4.31E-03
57	GO:0005507: copper ion binding	5.04E-03
58	GO:0071949: FAD binding	5.54E-03
59	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	6.04E-03
60	GO:0030955: potassium ion binding	6.21E-03
61	GO:0004743: pyruvate kinase activity	6.21E-03
62	GO:0004364: glutathione transferase activity	7.48E-03
63	GO:0008794: arsenate reductase (glutaredoxin) activity	7.65E-03
64	GO:0015293: symporter activity	8.76E-03
65	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	9.20E-03
66	GO:0051287: NAD binding	9.44E-03
67	GO:0008131: primary amine oxidase activity	1.00E-02
68	GO:0031624: ubiquitin conjugating enzyme binding	1.00E-02
69	GO:0017025: TBP-class protein binding	1.09E-02
70	GO:0003712: transcription cofactor activity	1.09E-02
71	GO:0031418: L-ascorbic acid binding	1.26E-02
72	GO:0043424: protein histidine kinase binding	1.35E-02
73	GO:0015035: protein disulfide oxidoreductase activity	1.55E-02
74	GO:0047134: protein-disulfide reductase activity	1.84E-02
75	GO:0005516: calmodulin binding	1.93E-02
76	GO:0005451: monovalent cation:proton antiporter activity	1.95E-02
77	GO:0008080: N-acetyltransferase activity	2.05E-02
78	GO:0001085: RNA polymerase II transcription factor binding	2.05E-02
79	GO:0015299: solute:proton antiporter activity	2.16E-02
80	GO:0004791: thioredoxin-disulfide reductase activity	2.16E-02
81	GO:0016853: isomerase activity	2.16E-02
82	GO:0048038: quinone binding	2.38E-02
83	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.42E-02
84	GO:0004197: cysteine-type endopeptidase activity	2.50E-02
85	GO:0015385: sodium:proton antiporter activity	2.62E-02
86	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.62E-02
87	GO:0016597: amino acid binding	2.98E-02
88	GO:0051213: dioxygenase activity	3.10E-02
89	GO:0016887: ATPase activity	3.21E-02
90	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.35E-02
91	GO:0030247: polysaccharide binding	3.48E-02
92	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.61E-02
93	GO:0015238: drug transmembrane transporter activity	3.88E-02
94	GO:0000287: magnesium ion binding	3.94E-02
95	GO:0004222: metalloendopeptidase activity	4.01E-02
96	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	4.15E-02
97	GO:0000987: core promoter proximal region sequence-specific DNA binding	4.57E-02
98	GO:0008422: beta-glucosidase activity	4.71E-02
99	GO:0008233: peptidase activity	4.88E-02
100	GO:0004497: monooxygenase activity	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
2	GO:0005886: plasma membrane	3.72E-09
3	GO:0005783: endoplasmic reticulum	6.14E-05
4	GO:0005829: cytosol	1.40E-04
5	GO:0045252: oxoglutarate dehydrogenase complex	2.41E-04
6	GO:0019773: proteasome core complex, alpha-subunit complex	2.70E-04
7	GO:0016021: integral component of membrane	3.27E-04
8	GO:0005901: caveola	5.34E-04
9	GO:0030134: ER to Golgi transport vesicle	5.34E-04
10	GO:0046861: glyoxysomal membrane	8.68E-04
11	GO:0005741: mitochondrial outer membrane	1.27E-03
12	GO:0005839: proteasome core complex	1.27E-03
13	GO:0000502: proteasome complex	1.58E-03
14	GO:0031372: UBC13-MMS2 complex	1.65E-03
15	GO:0016020: membrane	1.67E-03
16	GO:0005773: vacuole	1.76E-03
17	GO:0005789: endoplasmic reticulum membrane	2.00E-03
18	GO:0005945: 6-phosphofructokinase complex	2.11E-03
19	GO:0005801: cis-Golgi network	3.12E-03
20	GO:0031597: cytosolic proteasome complex	3.12E-03
21	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	3.68E-03
22	GO:0031595: nuclear proteasome complex	3.68E-03
23	GO:0005788: endoplasmic reticulum lumen	3.87E-03
24	GO:0031305: integral component of mitochondrial inner membrane	4.27E-03
25	GO:0000326: protein storage vacuole	4.89E-03
26	GO:0009514: glyoxysome	4.89E-03
27	GO:0030665: clathrin-coated vesicle membrane	6.21E-03
28	GO:0008540: proteasome regulatory particle, base subcomplex	6.21E-03
29	GO:0017119: Golgi transport complex	6.92E-03
30	GO:0005740: mitochondrial envelope	6.92E-03
31	GO:0031012: extracellular matrix	9.20E-03
32	GO:0005764: lysosome	1.00E-02
33	GO:0005794: Golgi apparatus	1.03E-02
34	GO:0005774: vacuolar membrane	1.17E-02
35	GO:0005758: mitochondrial intermembrane space	1.26E-02
36	GO:0048046: apoplast	1.30E-02
37	GO:0009505: plant-type cell wall	1.38E-02
38	GO:0019898: extrinsic component of membrane	2.27E-02
39	GO:0032580: Golgi cisterna membrane	2.73E-02
40	GO:0005778: peroxisomal membrane	2.85E-02
41	GO:0005667: transcription factor complex	3.35E-02
42	GO:0000151: ubiquitin ligase complex	3.75E-02
43	GO:0005618: cell wall	3.88E-02
44	GO:0009506: plasmodesma	4.23E-02
45	GO:0005777: peroxisome	4.50E-02
46	GO:0005819: spindle	4.71E-02