GO Enrichment Analysis of Co-expressed Genes with
AT1G67740
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006003: fructose 2,6-bisphosphate metabolic process | 0.00E+00 |
| 2 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 3 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 4 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 5 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 6 | GO:0015979: photosynthesis | 3.74E-07 |
| 7 | GO:0006000: fructose metabolic process | 2.44E-06 |
| 8 | GO:0009644: response to high light intensity | 2.00E-05 |
| 9 | GO:0042549: photosystem II stabilization | 2.72E-05 |
| 10 | GO:0006002: fructose 6-phosphate metabolic process | 8.55E-05 |
| 11 | GO:0009657: plastid organization | 8.55E-05 |
| 12 | GO:0010206: photosystem II repair | 1.05E-04 |
| 13 | GO:0000481: maturation of 5S rRNA | 1.12E-04 |
| 14 | GO:0043609: regulation of carbon utilization | 1.12E-04 |
| 15 | GO:0034337: RNA folding | 1.12E-04 |
| 16 | GO:0010205: photoinhibition | 1.27E-04 |
| 17 | GO:0018298: protein-chromophore linkage | 1.41E-04 |
| 18 | GO:0009773: photosynthetic electron transport in photosystem I | 1.78E-04 |
| 19 | GO:0006094: gluconeogenesis | 2.36E-04 |
| 20 | GO:0035304: regulation of protein dephosphorylation | 2.61E-04 |
| 21 | GO:1900871: chloroplast mRNA modification | 2.61E-04 |
| 22 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 2.61E-04 |
| 23 | GO:0010207: photosystem II assembly | 2.68E-04 |
| 24 | GO:0010114: response to red light | 2.79E-04 |
| 25 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.13E-04 |
| 26 | GO:0006518: peptide metabolic process | 4.32E-04 |
| 27 | GO:0006696: ergosterol biosynthetic process | 4.32E-04 |
| 28 | GO:0006013: mannose metabolic process | 4.32E-04 |
| 29 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 6.19E-04 |
| 30 | GO:0051513: regulation of monopolar cell growth | 6.19E-04 |
| 31 | GO:0006546: glycine catabolic process | 8.23E-04 |
| 32 | GO:0010023: proanthocyanidin biosynthetic process | 8.23E-04 |
| 33 | GO:0045727: positive regulation of translation | 8.23E-04 |
| 34 | GO:0015994: chlorophyll metabolic process | 8.23E-04 |
| 35 | GO:0008152: metabolic process | 9.87E-04 |
| 36 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.04E-03 |
| 37 | GO:0006461: protein complex assembly | 1.04E-03 |
| 38 | GO:1902456: regulation of stomatal opening | 1.27E-03 |
| 39 | GO:0006596: polyamine biosynthetic process | 1.27E-03 |
| 40 | GO:0048759: xylem vessel member cell differentiation | 1.27E-03 |
| 41 | GO:0015995: chlorophyll biosynthetic process | 1.49E-03 |
| 42 | GO:0010019: chloroplast-nucleus signaling pathway | 1.52E-03 |
| 43 | GO:0010067: procambium histogenesis | 1.52E-03 |
| 44 | GO:0009735: response to cytokinin | 1.76E-03 |
| 45 | GO:0009645: response to low light intensity stimulus | 1.78E-03 |
| 46 | GO:0009772: photosynthetic electron transport in photosystem II | 1.78E-03 |
| 47 | GO:0010196: nonphotochemical quenching | 1.78E-03 |
| 48 | GO:0010218: response to far red light | 1.82E-03 |
| 49 | GO:0032508: DNA duplex unwinding | 2.06E-03 |
| 50 | GO:0032544: plastid translation | 2.35E-03 |
| 51 | GO:0009723: response to ethylene | 2.63E-03 |
| 52 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 2.66E-03 |
| 53 | GO:0006810: transport | 2.73E-03 |
| 54 | GO:0009638: phototropism | 2.97E-03 |
| 55 | GO:0019684: photosynthesis, light reaction | 3.65E-03 |
| 56 | GO:0043085: positive regulation of catalytic activity | 3.65E-03 |
| 57 | GO:0009750: response to fructose | 3.65E-03 |
| 58 | GO:0005983: starch catabolic process | 4.00E-03 |
| 59 | GO:0018107: peptidyl-threonine phosphorylation | 4.36E-03 |
| 60 | GO:0009718: anthocyanin-containing compound biosynthetic process | 4.36E-03 |
| 61 | GO:0009767: photosynthetic electron transport chain | 4.36E-03 |
| 62 | GO:0005986: sucrose biosynthetic process | 4.36E-03 |
| 63 | GO:0010223: secondary shoot formation | 4.74E-03 |
| 64 | GO:0006636: unsaturated fatty acid biosynthetic process | 5.52E-03 |
| 65 | GO:0006418: tRNA aminoacylation for protein translation | 6.35E-03 |
| 66 | GO:0061077: chaperone-mediated protein folding | 6.78E-03 |
| 67 | GO:0010017: red or far-red light signaling pathway | 7.22E-03 |
| 68 | GO:0001944: vasculature development | 7.67E-03 |
| 69 | GO:0009686: gibberellin biosynthetic process | 7.67E-03 |
| 70 | GO:0010089: xylem development | 8.13E-03 |
| 71 | GO:0016117: carotenoid biosynthetic process | 8.60E-03 |
| 72 | GO:0007623: circadian rhythm | 8.80E-03 |
| 73 | GO:0009451: RNA modification | 9.00E-03 |
| 74 | GO:0010087: phloem or xylem histogenesis | 9.08E-03 |
| 75 | GO:0009958: positive gravitropism | 9.57E-03 |
| 76 | GO:0010268: brassinosteroid homeostasis | 9.57E-03 |
| 77 | GO:0016132: brassinosteroid biosynthetic process | 1.11E-02 |
| 78 | GO:0010193: response to ozone | 1.11E-02 |
| 79 | GO:0030163: protein catabolic process | 1.22E-02 |
| 80 | GO:0071281: cellular response to iron ion | 1.22E-02 |
| 81 | GO:0016125: sterol metabolic process | 1.27E-02 |
| 82 | GO:0071805: potassium ion transmembrane transport | 1.33E-02 |
| 83 | GO:0009658: chloroplast organization | 1.37E-02 |
| 84 | GO:0042128: nitrate assimilation | 1.56E-02 |
| 85 | GO:0016311: dephosphorylation | 1.68E-02 |
| 86 | GO:0048481: plant ovule development | 1.74E-02 |
| 87 | GO:0009737: response to abscisic acid | 1.85E-02 |
| 88 | GO:0006499: N-terminal protein myristoylation | 1.86E-02 |
| 89 | GO:0009637: response to blue light | 2.06E-02 |
| 90 | GO:0032259: methylation | 2.40E-02 |
| 91 | GO:0006979: response to oxidative stress | 2.41E-02 |
| 92 | GO:0009926: auxin polar transport | 2.46E-02 |
| 93 | GO:0006364: rRNA processing | 3.04E-02 |
| 94 | GO:0009585: red, far-red light phototransduction | 3.04E-02 |
| 95 | GO:0006813: potassium ion transport | 3.04E-02 |
| 96 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.12E-02 |
| 97 | GO:0010224: response to UV-B | 3.12E-02 |
| 98 | GO:0006417: regulation of translation | 3.27E-02 |
| 99 | GO:0006096: glycolytic process | 3.43E-02 |
| 100 | GO:0009409: response to cold | 3.47E-02 |
| 101 | GO:0018105: peptidyl-serine phosphorylation | 3.99E-02 |
| 102 | GO:0006396: RNA processing | 3.99E-02 |
| 103 | GO:0046686: response to cadmium ion | 4.13E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity | 0.00E+00 |
| 2 | GO:0003873: 6-phosphofructo-2-kinase activity | 0.00E+00 |
| 3 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 4 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 5 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 6 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 7 | GO:0010487: thermospermine synthase activity | 0.00E+00 |
| 8 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 9 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 10 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 11 | GO:0005528: FK506 binding | 1.24E-05 |
| 12 | GO:0016168: chlorophyll binding | 1.04E-04 |
| 13 | GO:0051777: ent-kaurenoate oxidase activity | 1.12E-04 |
| 14 | GO:0016768: spermine synthase activity | 1.12E-04 |
| 15 | GO:0046906: tetrapyrrole binding | 1.12E-04 |
| 16 | GO:0010242: oxygen evolving activity | 1.12E-04 |
| 17 | GO:0051996: squalene synthase activity | 1.12E-04 |
| 18 | GO:0045485: omega-6 fatty acid desaturase activity | 1.12E-04 |
| 19 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 2.61E-04 |
| 20 | GO:0047746: chlorophyllase activity | 2.61E-04 |
| 21 | GO:0016868: intramolecular transferase activity, phosphotransferases | 2.61E-04 |
| 22 | GO:0004047: aminomethyltransferase activity | 2.61E-04 |
| 23 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 2.61E-04 |
| 24 | GO:0008967: phosphoglycolate phosphatase activity | 2.61E-04 |
| 25 | GO:0008266: poly(U) RNA binding | 2.68E-04 |
| 26 | GO:0031409: pigment binding | 3.37E-04 |
| 27 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.42E-04 |
| 28 | GO:0016787: hydrolase activity | 3.76E-04 |
| 29 | GO:0015079: potassium ion transmembrane transporter activity | 4.13E-04 |
| 30 | GO:0002161: aminoacyl-tRNA editing activity | 4.32E-04 |
| 31 | GO:0003727: single-stranded RNA binding | 5.85E-04 |
| 32 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 8.23E-04 |
| 33 | GO:2001070: starch binding | 1.27E-03 |
| 34 | GO:0004332: fructose-bisphosphate aldolase activity | 1.27E-03 |
| 35 | GO:0004559: alpha-mannosidase activity | 1.52E-03 |
| 36 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.52E-03 |
| 37 | GO:0019899: enzyme binding | 1.78E-03 |
| 38 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.89E-03 |
| 39 | GO:0015386: potassium:proton antiporter activity | 3.65E-03 |
| 40 | GO:0000049: tRNA binding | 4.00E-03 |
| 41 | GO:0031072: heat shock protein binding | 4.36E-03 |
| 42 | GO:0004565: beta-galactosidase activity | 4.36E-03 |
| 43 | GO:0046872: metal ion binding | 7.10E-03 |
| 44 | GO:0022891: substrate-specific transmembrane transporter activity | 7.67E-03 |
| 45 | GO:0003756: protein disulfide isomerase activity | 8.13E-03 |
| 46 | GO:0004812: aminoacyl-tRNA ligase activity | 8.60E-03 |
| 47 | GO:0016491: oxidoreductase activity | 8.94E-03 |
| 48 | GO:0050662: coenzyme binding | 1.01E-02 |
| 49 | GO:0005515: protein binding | 1.11E-02 |
| 50 | GO:0048038: quinone binding | 1.11E-02 |
| 51 | GO:0042802: identical protein binding | 1.12E-02 |
| 52 | GO:0004518: nuclease activity | 1.16E-02 |
| 53 | GO:0008483: transaminase activity | 1.33E-02 |
| 54 | GO:0008236: serine-type peptidase activity | 1.68E-02 |
| 55 | GO:0004222: metalloendopeptidase activity | 1.86E-02 |
| 56 | GO:0004871: signal transducer activity | 2.13E-02 |
| 57 | GO:0005509: calcium ion binding | 2.15E-02 |
| 58 | GO:0004185: serine-type carboxypeptidase activity | 2.46E-02 |
| 59 | GO:0043621: protein self-association | 2.60E-02 |
| 60 | GO:0004519: endonuclease activity | 2.72E-02 |
| 61 | GO:0051082: unfolded protein binding | 3.91E-02 |
| 62 | GO:0019843: rRNA binding | 4.59E-02 |
| 63 | GO:0003723: RNA binding | 4.75E-02 |
| 64 | GO:0004252: serine-type endopeptidase activity | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 2 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 3 | GO:0009534: chloroplast thylakoid | 1.53E-28 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 5.96E-28 |
| 5 | GO:0009507: chloroplast | 2.99E-24 |
| 6 | GO:0009941: chloroplast envelope | 1.07E-18 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 1.58E-15 |
| 8 | GO:0009579: thylakoid | 4.09E-13 |
| 9 | GO:0009570: chloroplast stroma | 1.07E-12 |
| 10 | GO:0030095: chloroplast photosystem II | 6.49E-10 |
| 11 | GO:0010287: plastoglobule | 1.90E-07 |
| 12 | GO:0009523: photosystem II | 1.26E-06 |
| 13 | GO:0031969: chloroplast membrane | 4.38E-06 |
| 14 | GO:0009654: photosystem II oxygen evolving complex | 1.47E-05 |
| 15 | GO:0019898: extrinsic component of membrane | 4.90E-05 |
| 16 | GO:0009533: chloroplast stromal thylakoid | 5.19E-05 |
| 17 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.12E-04 |
| 18 | GO:0009782: photosystem I antenna complex | 1.12E-04 |
| 19 | GO:0031977: thylakoid lumen | 2.50E-04 |
| 20 | GO:0080085: signal recognition particle, chloroplast targeting | 2.61E-04 |
| 21 | GO:0042651: thylakoid membrane | 4.13E-04 |
| 22 | GO:0009538: photosystem I reaction center | 2.06E-03 |
| 23 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 2.35E-03 |
| 24 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.66E-03 |
| 25 | GO:0042644: chloroplast nucleoid | 2.66E-03 |
| 26 | GO:0032040: small-subunit processome | 4.00E-03 |
| 27 | GO:0009508: plastid chromosome | 4.36E-03 |
| 28 | GO:0009706: chloroplast inner membrane | 5.09E-03 |
| 29 | GO:0030076: light-harvesting complex | 5.13E-03 |
| 30 | GO:0009505: plant-type cell wall | 8.30E-03 |
| 31 | GO:0009522: photosystem I | 1.01E-02 |
| 32 | GO:0048046: apoplast | 1.32E-02 |
| 33 | GO:0009295: nucleoid | 1.33E-02 |
| 34 | GO:0016021: integral component of membrane | 1.46E-02 |
| 35 | GO:0043231: intracellular membrane-bounded organelle | 2.76E-02 |
| 36 | GO:0005623: cell | 4.68E-02 |