co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G67430

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071731: response to nitric oxide	0.00E+00
2	GO:0044843: cell cycle G1/S phase transition	0.00E+00
3	GO:0006412: translation	4.27E-64
4	GO:0042254: ribosome biogenesis	1.60E-32
5	GO:0000027: ribosomal large subunit assembly	6.45E-12
6	GO:0000028: ribosomal small subunit assembly	2.07E-09
7	GO:0009735: response to cytokinin	1.37E-07
8	GO:0006364: rRNA processing	7.03E-07
9	GO:0007005: mitochondrion organization	1.40E-05
10	GO:0000494: box C/D snoRNA 3'-end processing	9.50E-05
11	GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	9.50E-05
12	GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	9.50E-05
13	GO:1990258: histone glutamine methylation	9.50E-05
14	GO:0006407: rRNA export from nucleus	9.50E-05
15	GO:0030490: maturation of SSU-rRNA	9.50E-05
16	GO:0010162: seed dormancy process	1.20E-04
17	GO:0006626: protein targeting to mitochondrion	1.88E-04
18	GO:0045041: protein import into mitochondrial intermembrane space	2.24E-04
19	GO:0009793: embryo development ending in seed dormancy	2.65E-04
20	GO:0009944: polarity specification of adaxial/abaxial axis	3.00E-04
21	GO:1902626: assembly of large subunit precursor of preribosome	3.73E-04
22	GO:0002181: cytoplasmic translation	3.73E-04
23	GO:0042256: mature ribosome assembly	3.73E-04
24	GO:0009294: DNA mediated transformation	4.36E-04
25	GO:0070301: cellular response to hydrogen peroxide	5.37E-04
26	GO:0051085: chaperone mediated protein folding requiring cofactor	5.37E-04
27	GO:0006241: CTP biosynthetic process	5.37E-04
28	GO:0006165: nucleoside diphosphate phosphorylation	5.37E-04
29	GO:0006228: UTP biosynthetic process	5.37E-04
30	GO:0051131: chaperone-mediated protein complex assembly	5.37E-04
31	GO:0006986: response to unfolded protein	5.37E-04
32	GO:0010501: RNA secondary structure unwinding	5.52E-04
33	GO:0042274: ribosomal small subunit biogenesis	7.14E-04
34	GO:0006183: GTP biosynthetic process	7.14E-04
35	GO:0032502: developmental process	7.76E-04
36	GO:0071493: cellular response to UV-B	9.02E-04
37	GO:0031167: rRNA methylation	9.02E-04
38	GO:0042026: protein refolding	1.31E-03
39	GO:0006458: 'de novo' protein folding	1.31E-03
40	GO:0001510: RNA methylation	2.03E-03
41	GO:0001558: regulation of cell growth	2.03E-03
42	GO:0046686: response to cadmium ion	2.05E-03
43	GO:0006820: anion transport	3.44E-03
44	GO:0010229: inflorescence development	3.76E-03
45	GO:0048467: gynoecium development	4.08E-03
46	GO:0030150: protein import into mitochondrial matrix	5.10E-03
47	GO:0051302: regulation of cell division	5.46E-03
48	GO:0061077: chaperone-mediated protein folding	5.83E-03
49	GO:0006413: translational initiation	6.58E-03
50	GO:0040007: growth	6.58E-03
51	GO:0008033: tRNA processing	7.79E-03
52	GO:0000413: protein peptidyl-prolyl isomerization	7.79E-03
53	GO:0009651: response to salt stress	7.83E-03
54	GO:0009791: post-embryonic development	9.06E-03
55	GO:0006414: translational elongation	1.22E-02
56	GO:0016049: cell growth	1.43E-02
57	GO:0006811: ion transport	1.59E-02
58	GO:0048527: lateral root development	1.65E-02
59	GO:0010043: response to zinc ion	1.65E-02
60	GO:0006099: tricarboxylic acid cycle	1.81E-02
61	GO:0009408: response to heat	2.01E-02
62	GO:0008283: cell proliferation	2.10E-02
63	GO:0009644: response to high light intensity	2.23E-02
64	GO:0009965: leaf morphogenesis	2.29E-02
65	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.41E-02
66	GO:0015031: protein transport	2.44E-02
67	GO:0010224: response to UV-B	2.67E-02
68	GO:0009734: auxin-activated signaling pathway	2.83E-02
69	GO:0016569: covalent chromatin modification	3.20E-02
70	GO:0006457: protein folding	4.59E-02

Rank	GO Term	Adjusted P value
1	GO:0016018: cyclosporin A binding	0.00E+00
2	GO:0003735: structural constituent of ribosome	1.55E-74
3	GO:0003729: mRNA binding	2.90E-25
4	GO:0003723: RNA binding	5.26E-07
5	GO:0048037: cofactor binding	9.50E-05
6	GO:1990259: histone-glutamine methyltransferase activity	9.50E-05
7	GO:0004775: succinate-CoA ligase (ADP-forming) activity	2.24E-04
8	GO:0004776: succinate-CoA ligase (GDP-forming) activity	2.24E-04
9	GO:0004407: histone deacetylase activity	3.00E-04
10	GO:0008649: rRNA methyltransferase activity	3.73E-04
11	GO:0070180: large ribosomal subunit rRNA binding	3.73E-04
12	GO:0008026: ATP-dependent helicase activity	5.26E-04
13	GO:0004550: nucleoside diphosphate kinase activity	5.37E-04
14	GO:0008097: 5S rRNA binding	5.37E-04
15	GO:0019843: rRNA binding	6.48E-04
16	GO:0004004: ATP-dependent RNA helicase activity	1.21E-03
17	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.33E-03
18	GO:0008235: metalloexopeptidase activity	1.54E-03
19	GO:0030515: snoRNA binding	1.54E-03
20	GO:0008143: poly(A) binding	1.54E-03
21	GO:0003746: translation elongation factor activity	1.68E-03
22	GO:0015288: porin activity	1.78E-03
23	GO:0008308: voltage-gated anion channel activity	2.03E-03
24	GO:0005507: copper ion binding	2.47E-03
25	GO:0044183: protein binding involved in protein folding	3.14E-03
26	GO:0015266: protein channel activity	3.76E-03
27	GO:0051082: unfolded protein binding	4.10E-03
28	GO:0051087: chaperone binding	5.46E-03
29	GO:0003743: translation initiation factor activity	8.25E-03
30	GO:0046872: metal ion binding	2.02E-02
31	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.35E-02
32	GO:0004386: helicase activity	3.56E-02

Rank	GO Term	Adjusted P value
1	GO:0022625: cytosolic large ribosomal subunit	4.90E-59
2	GO:0022626: cytosolic ribosome	1.28E-58
3	GO:0005840: ribosome	4.45E-56
4	GO:0005730: nucleolus	1.30E-37
5	GO:0005829: cytosol	3.78E-24
6	GO:0009506: plasmodesma	2.44E-23
7	GO:0022627: cytosolic small ribosomal subunit	1.20E-21
8	GO:0005737: cytoplasm	2.99E-17
9	GO:0005774: vacuolar membrane	9.29E-15
10	GO:0015935: small ribosomal subunit	1.70E-09
11	GO:0015934: large ribosomal subunit	2.14E-09
12	GO:0005773: vacuole	6.00E-08
13	GO:0016020: membrane	9.18E-08
14	GO:0005618: cell wall	1.12E-07
15	GO:0005886: plasma membrane	1.80E-05
16	GO:0005742: mitochondrial outer membrane translocase complex	6.66E-05
17	GO:0030686: 90S preribosome	9.50E-05
18	GO:0005853: eukaryotic translation elongation factor 1 complex	3.73E-04
19	GO:0031428: box C/D snoRNP complex	1.10E-03
20	GO:0046930: pore complex	2.03E-03
21	GO:0005763: mitochondrial small ribosomal subunit	2.29E-03
22	GO:0015030: Cajal body	2.56E-03
23	GO:0009507: chloroplast	3.31E-03
24	GO:0032040: small-subunit processome	3.44E-03
25	GO:0005747: mitochondrial respiratory chain complex I	3.52E-03
26	GO:0005758: mitochondrial intermembrane space	5.10E-03
27	GO:0005741: mitochondrial outer membrane	5.83E-03
28	GO:0005759: mitochondrial matrix	6.42E-03
29	GO:0030529: intracellular ribonucleoprotein complex	1.23E-02
30	GO:0005622: intracellular	1.53E-02
31	GO:0005743: mitochondrial inner membrane	1.87E-02
32	GO:0048046: apoplast	2.93E-02