co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G65010

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042493: response to drug	0.00E+00
2	GO:0032206: positive regulation of telomere maintenance	0.00E+00
3	GO:1905499: trichome papilla formation	0.00E+00
4	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	0.00E+00
5	GO:0007638: mechanosensory behavior	0.00E+00
6	GO:0046322: negative regulation of fatty acid oxidation	0.00E+00
7	GO:0032212: positive regulation of telomere maintenance via telomerase	0.00E+00
8	GO:0071555: cell wall organization	2.12E-07
9	GO:0010411: xyloglucan metabolic process	2.88E-06
10	GO:0007017: microtubule-based process	3.46E-06
11	GO:0010306: rhamnogalacturonan II biosynthetic process	2.67E-05
12	GO:0009828: plant-type cell wall loosening	2.95E-05
13	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.49E-04
14	GO:0042546: cell wall biogenesis	1.82E-04
15	GO:0045490: pectin catabolic process	1.94E-04
16	GO:0042335: cuticle development	2.11E-04
17	GO:0006869: lipid transport	2.21E-04
18	GO:0009664: plant-type cell wall organization	2.50E-04
19	GO:0080051: cutin transport	2.68E-04
20	GO:1902458: positive regulation of stomatal opening	2.68E-04
21	GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway	2.68E-04
22	GO:0060627: regulation of vesicle-mediated transport	2.68E-04
23	GO:0006176: dATP biosynthetic process from ADP	2.68E-04
24	GO:0005980: glycogen catabolic process	2.68E-04
25	GO:0000032: cell wall mannoprotein biosynthetic process	2.68E-04
26	GO:0032025: response to cobalt ion	2.68E-04
27	GO:0016042: lipid catabolic process	2.69E-04
28	GO:0009826: unidimensional cell growth	4.15E-04
29	GO:0006949: syncytium formation	5.26E-04
30	GO:0071258: cellular response to gravity	5.89E-04
31	GO:1903426: regulation of reactive oxygen species biosynthetic process	5.89E-04
32	GO:0010198: synergid death	5.89E-04
33	GO:0015908: fatty acid transport	5.89E-04
34	GO:0010541: acropetal auxin transport	5.89E-04
35	GO:0010015: root morphogenesis	6.07E-04
36	GO:0007568: aging	8.52E-04
37	GO:0005975: carbohydrate metabolic process	8.72E-04
38	GO:0045493: xylan catabolic process	9.55E-04
39	GO:0006065: UDP-glucuronate biosynthetic process	9.55E-04
40	GO:0090506: axillary shoot meristem initiation	9.55E-04
41	GO:0033591: response to L-ascorbic acid	9.55E-04
42	GO:0046168: glycerol-3-phosphate catabolic process	9.55E-04
43	GO:0010160: formation of animal organ boundary	9.55E-04
44	GO:1901562: response to paraquat	9.55E-04
45	GO:0051017: actin filament bundle assembly	1.21E-03
46	GO:0009413: response to flooding	1.36E-03
47	GO:0009298: GDP-mannose biosynthetic process	1.36E-03
48	GO:0007231: osmosensory signaling pathway	1.36E-03
49	GO:0051639: actin filament network formation	1.36E-03
50	GO:0043481: anthocyanin accumulation in tissues in response to UV light	1.36E-03
51	GO:0006072: glycerol-3-phosphate metabolic process	1.36E-03
52	GO:0051016: barbed-end actin filament capping	1.36E-03
53	GO:0009650: UV protection	1.36E-03
54	GO:0010731: protein glutathionylation	1.36E-03
55	GO:0050482: arachidonic acid secretion	1.36E-03
56	GO:0030245: cellulose catabolic process	1.60E-03
57	GO:0009956: radial pattern formation	1.83E-03
58	GO:0010222: stem vascular tissue pattern formation	1.83E-03
59	GO:0051764: actin crosslink formation	1.83E-03
60	GO:0009765: photosynthesis, light harvesting	1.83E-03
61	GO:0006085: acetyl-CoA biosynthetic process	1.83E-03
62	GO:0006183: GTP biosynthetic process	1.83E-03
63	GO:0033500: carbohydrate homeostasis	1.83E-03
64	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.05E-03
65	GO:0016123: xanthophyll biosynthetic process	2.33E-03
66	GO:0006665: sphingolipid metabolic process	2.33E-03
67	GO:0016120: carotene biosynthetic process	2.33E-03
68	GO:0045038: protein import into chloroplast thylakoid membrane	2.33E-03
69	GO:0048868: pollen tube development	2.39E-03
70	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	2.88E-03
71	GO:0060918: auxin transport	2.88E-03
72	GO:0006014: D-ribose metabolic process	2.88E-03
73	GO:0010583: response to cyclopentenone	3.14E-03
74	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.20E-03
75	GO:0010067: procambium histogenesis	3.46E-03
76	GO:0009612: response to mechanical stimulus	3.46E-03
77	GO:0009082: branched-chain amino acid biosynthetic process	3.46E-03
78	GO:0009099: valine biosynthetic process	3.46E-03
79	GO:0009645: response to low light intensity stimulus	4.08E-03
80	GO:0045010: actin nucleation	4.73E-03
81	GO:0006644: phospholipid metabolic process	4.73E-03
82	GO:0009819: drought recovery	4.73E-03
83	GO:2000070: regulation of response to water deprivation	4.73E-03
84	GO:0042128: nitrate assimilation	4.74E-03
85	GO:0006633: fatty acid biosynthetic process	5.30E-03
86	GO:0015996: chlorophyll catabolic process	5.42E-03
87	GO:0007186: G-protein coupled receptor signaling pathway	5.42E-03
88	GO:0009097: isoleucine biosynthetic process	5.42E-03
89	GO:0006629: lipid metabolic process	5.50E-03
90	GO:0006754: ATP biosynthetic process	6.14E-03
91	GO:0009638: phototropism	6.90E-03
92	GO:0000723: telomere maintenance	6.90E-03
93	GO:0009098: leucine biosynthetic process	6.90E-03
94	GO:0042761: very long-chain fatty acid biosynthetic process	6.90E-03
95	GO:0016051: carbohydrate biosynthetic process	7.02E-03
96	GO:0006816: calcium ion transport	8.50E-03
97	GO:0008361: regulation of cell size	9.35E-03
98	GO:0016024: CDP-diacylglycerol biosynthetic process	9.35E-03
99	GO:0045037: protein import into chloroplast stroma	9.35E-03
100	GO:0030036: actin cytoskeleton organization	1.02E-02
101	GO:0010588: cotyledon vascular tissue pattern formation	1.02E-02
102	GO:0010223: secondary shoot formation	1.11E-02
103	GO:0010540: basipetal auxin transport	1.11E-02
104	GO:0009266: response to temperature stimulus	1.11E-02
105	GO:0010143: cutin biosynthetic process	1.11E-02
106	GO:0009933: meristem structural organization	1.11E-02
107	GO:0010207: photosystem II assembly	1.11E-02
108	GO:0042538: hyperosmotic salinity response	1.14E-02
109	GO:0009414: response to water deprivation	1.16E-02
110	GO:0010030: positive regulation of seed germination	1.21E-02
111	GO:0070588: calcium ion transmembrane transport	1.21E-02
112	GO:0009969: xyloglucan biosynthetic process	1.21E-02
113	GO:0010167: response to nitrate	1.21E-02
114	GO:0006486: protein glycosylation	1.22E-02
115	GO:0006833: water transport	1.30E-02
116	GO:0010025: wax biosynthetic process	1.30E-02
117	GO:0019953: sexual reproduction	1.50E-02
118	GO:0016998: cell wall macromolecule catabolic process	1.61E-02
119	GO:0010431: seed maturation	1.61E-02
120	GO:0009737: response to abscisic acid	1.62E-02
121	GO:0015979: photosynthesis	1.62E-02
122	GO:0031348: negative regulation of defense response	1.71E-02
123	GO:0009624: response to nematode	1.75E-02
124	GO:0001944: vasculature development	1.82E-02
125	GO:0009294: DNA mediated transformation	1.82E-02
126	GO:0009411: response to UV	1.82E-02
127	GO:0010089: xylem development	1.94E-02
128	GO:0048443: stamen development	1.94E-02
129	GO:0019722: calcium-mediated signaling	1.94E-02
130	GO:0010091: trichome branching	1.94E-02
131	GO:0016117: carotenoid biosynthetic process	2.05E-02
132	GO:0000413: protein peptidyl-prolyl isomerization	2.17E-02
133	GO:0010087: phloem or xylem histogenesis	2.17E-02
134	GO:0042631: cellular response to water deprivation	2.17E-02
135	GO:0000226: microtubule cytoskeleton organization	2.17E-02
136	GO:0080022: primary root development	2.17E-02
137	GO:0034220: ion transmembrane transport	2.17E-02
138	GO:0010182: sugar mediated signaling pathway	2.29E-02
139	GO:0009958: positive gravitropism	2.29E-02
140	GO:0010305: leaf vascular tissue pattern formation	2.29E-02
141	GO:0019252: starch biosynthetic process	2.53E-02
142	GO:0071554: cell wall organization or biogenesis	2.65E-02
143	GO:0009639: response to red or far red light	3.04E-02
144	GO:0007267: cell-cell signaling	3.18E-02
145	GO:0009739: response to gibberellin	3.38E-02
146	GO:0010027: thylakoid membrane organization	3.45E-02
147	GO:0009627: systemic acquired resistance	3.73E-02
148	GO:0015995: chlorophyll biosynthetic process	3.88E-02
149	GO:0007165: signal transduction	4.16E-02
150	GO:0009817: defense response to fungus, incompatible interaction	4.17E-02
151	GO:0009407: toxin catabolic process	4.47E-02
152	GO:0010218: response to far red light	4.47E-02
153	GO:0010043: response to zinc ion	4.62E-02
154	GO:0048527: lateral root development	4.62E-02
155	GO:0009637: response to blue light	4.93E-02
156	GO:0045087: innate immune response	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
2	GO:0015252: hydrogen ion channel activity	0.00E+00
3	GO:0047889: ferredoxin-nitrate reductase activity	0.00E+00
4	GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity	0.00E+00
5	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	0.00E+00
6	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
7	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
8	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
9	GO:0048307: ferredoxin-nitrite reductase activity	0.00E+00
10	GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity	0.00E+00
11	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
12	GO:0050421: nitrite reductase (NO-forming) activity	0.00E+00
13	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.02E-06
14	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	3.29E-06
15	GO:0030570: pectate lyase activity	6.38E-06
16	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.98E-05
17	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	2.67E-05
18	GO:0005200: structural constituent of cytoskeleton	3.32E-05
19	GO:0016798: hydrolase activity, acting on glycosyl bonds	5.75E-05
20	GO:0052689: carboxylic ester hydrolase activity	1.49E-04
21	GO:0015245: fatty acid transporter activity	2.68E-04
22	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	2.68E-04
23	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	2.68E-04
24	GO:0008184: glycogen phosphorylase activity	2.68E-04
25	GO:0004645: phosphorylase activity	2.68E-04
26	GO:0004476: mannose-6-phosphate isomerase activity	2.68E-04
27	GO:0051015: actin filament binding	3.71E-04
28	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	3.80E-04
29	GO:0016788: hydrolase activity, acting on ester bonds	4.60E-04
30	GO:0008289: lipid binding	5.68E-04
31	GO:0003938: IMP dehydrogenase activity	5.89E-04
32	GO:0008378: galactosyltransferase activity	6.94E-04
33	GO:0016829: lyase activity	7.84E-04
34	GO:0004565: beta-galactosidase activity	7.86E-04
35	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	9.55E-04
36	GO:0003979: UDP-glucose 6-dehydrogenase activity	9.55E-04
37	GO:0045174: glutathione dehydrogenase (ascorbate) activity	9.55E-04
38	GO:0052654: L-leucine transaminase activity	1.36E-03
39	GO:0052655: L-valine transaminase activity	1.36E-03
40	GO:0001872: (1->3)-beta-D-glucan binding	1.36E-03
41	GO:0003878: ATP citrate synthase activity	1.36E-03
42	GO:0043047: single-stranded telomeric DNA binding	1.36E-03
43	GO:0016851: magnesium chelatase activity	1.36E-03
44	GO:0052656: L-isoleucine transaminase activity	1.36E-03
45	GO:0008810: cellulase activity	1.74E-03
46	GO:0046556: alpha-L-arabinofuranosidase activity	1.83E-03
47	GO:0016836: hydro-lyase activity	1.83E-03
48	GO:0080032: methyl jasmonate esterase activity	1.83E-03
49	GO:1990137: plant seed peroxidase activity	1.83E-03
50	GO:0052793: pectin acetylesterase activity	1.83E-03
51	GO:0004084: branched-chain-amino-acid transaminase activity	1.83E-03
52	GO:0009044: xylan 1,4-beta-xylosidase activity	1.83E-03
53	GO:0009922: fatty acid elongase activity	2.33E-03
54	GO:0004623: phospholipase A2 activity	2.33E-03
55	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.88E-03
56	GO:0004629: phospholipase C activity	2.88E-03
57	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.88E-03
58	GO:0004747: ribokinase activity	3.46E-03
59	GO:0051753: mannan synthase activity	3.46E-03
60	GO:0004435: phosphatidylinositol phospholipase C activity	3.46E-03
61	GO:0042162: telomeric DNA binding	4.08E-03
62	GO:0004871: signal transducer activity	4.30E-03
63	GO:0004714: transmembrane receptor protein tyrosine kinase activity	4.73E-03
64	GO:0052747: sinapyl alcohol dehydrogenase activity	4.73E-03
65	GO:0008865: fructokinase activity	4.73E-03
66	GO:0003924: GTPase activity	5.50E-03
67	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	6.14E-03
68	GO:0015020: glucuronosyltransferase activity	7.68E-03
69	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	8.11E-03
70	GO:0047372: acylglycerol lipase activity	8.50E-03
71	GO:0004364: glutathione transferase activity	8.70E-03
72	GO:0045551: cinnamyl-alcohol dehydrogenase activity	9.35E-03
73	GO:0005262: calcium channel activity	1.02E-02
74	GO:0010329: auxin efflux transmembrane transporter activity	1.02E-02
75	GO:0051287: NAD binding	1.10E-02
76	GO:0004857: enzyme inhibitor activity	1.40E-02
77	GO:0033612: receptor serine/threonine kinase binding	1.61E-02
78	GO:0030599: pectinesterase activity	1.64E-02
79	GO:0005102: receptor binding	2.05E-02
80	GO:0003713: transcription coactivator activity	2.29E-02
81	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	2.29E-02
82	GO:0005516: calmodulin binding	2.42E-02
83	GO:0019901: protein kinase binding	2.53E-02
84	GO:0005525: GTP binding	2.76E-02
85	GO:0016791: phosphatase activity	3.04E-02
86	GO:0016722: oxidoreductase activity, oxidizing metal ions	3.18E-02
87	GO:0016413: O-acetyltransferase activity	3.31E-02
88	GO:0005509: calcium ion binding	3.32E-02
89	GO:0015250: water channel activity	3.45E-02
90	GO:0008375: acetylglucosaminyltransferase activity	3.73E-02
91	GO:0030247: polysaccharide binding	3.88E-02

Rank	GO Term	Adjusted P value
1	GO:0005618: cell wall	1.33E-17
2	GO:0009534: chloroplast thylakoid	5.62E-12
3	GO:0048046: apoplast	4.94E-11
4	GO:0005576: extracellular region	4.39E-10
5	GO:0005886: plasma membrane	1.71E-09
6	GO:0031225: anchored component of membrane	4.89E-09
7	GO:0009505: plant-type cell wall	9.32E-09
8	GO:0046658: anchored component of plasma membrane	3.14E-07
9	GO:0031977: thylakoid lumen	4.95E-07
10	GO:0016020: membrane	3.87E-06
11	GO:0009543: chloroplast thylakoid lumen	9.05E-06
12	GO:0045298: tubulin complex	1.19E-05
13	GO:0009535: chloroplast thylakoid membrane	5.91E-05
14	GO:0009570: chloroplast stroma	9.26E-05
15	GO:0009923: fatty acid elongase complex	2.68E-04
16	GO:0009506: plasmodesma	5.63E-04
17	GO:0005697: telomerase holoenzyme complex	5.89E-04
18	GO:0009528: plastid inner membrane	9.55E-04
19	GO:0010007: magnesium chelatase complex	9.55E-04
20	GO:0009897: external side of plasma membrane	9.55E-04
21	GO:0009507: chloroplast	1.25E-03
22	GO:0009654: photosystem II oxygen evolving complex	1.33E-03
23	GO:0015630: microtubule cytoskeleton	1.36E-03
24	GO:0032432: actin filament bundle	1.36E-03
25	GO:0009346: citrate lyase complex	1.36E-03
26	GO:0009331: glycerol-3-phosphate dehydrogenase complex	1.36E-03
27	GO:0009544: chloroplast ATP synthase complex	1.83E-03
28	GO:0009527: plastid outer membrane	1.83E-03
29	GO:0019898: extrinsic component of membrane	2.75E-03
30	GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)	2.88E-03
31	GO:0005874: microtubule	2.88E-03
32	GO:0009579: thylakoid	4.84E-03
33	GO:0000784: nuclear chromosome, telomeric region	5.42E-03
34	GO:0005811: lipid particle	5.42E-03
35	GO:0005884: actin filament	8.50E-03
36	GO:0030095: chloroplast photosystem II	1.11E-02
37	GO:0009941: chloroplast envelope	1.25E-02
38	GO:0005875: microtubule associated complex	1.30E-02
39	GO:0009532: plastid stroma	1.61E-02
40	GO:0031410: cytoplasmic vesicle	1.71E-02
41	GO:0015629: actin cytoskeleton	1.82E-02
42	GO:0010287: plastoglobule	2.07E-02
43	GO:0010319: stromule	3.18E-02
44	GO:0009707: chloroplast outer membrane	4.17E-02
45	GO:0000151: ubiquitin ligase complex	4.17E-02