Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G64640

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
2GO:0032212: positive regulation of telomere maintenance via telomerase0.00E+00
3GO:0042493: response to drug0.00E+00
4GO:0032206: positive regulation of telomere maintenance0.00E+00
5GO:1905499: trichome papilla formation0.00E+00
6GO:0006437: tyrosyl-tRNA aminoacylation0.00E+00
7GO:0071555: cell wall organization6.81E-08
8GO:0010411: xyloglucan metabolic process1.68E-06
9GO:0042546: cell wall biogenesis8.79E-06
10GO:0006633: fatty acid biosynthetic process1.05E-04
11GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity1.23E-04
12GO:0006869: lipid transport1.37E-04
13GO:0042335: cuticle development1.58E-04
14GO:0019510: S-adenosylhomocysteine catabolic process2.32E-04
15GO:0060627: regulation of vesicle-mediated transport2.32E-04
16GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process2.32E-04
17GO:0005980: glycogen catabolic process2.32E-04
18GO:0000032: cell wall mannoprotein biosynthetic process2.32E-04
19GO:0032025: response to cobalt ion2.32E-04
20GO:0042759: long-chain fatty acid biosynthetic process2.32E-04
21GO:0043007: maintenance of rDNA2.32E-04
22GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway2.32E-04
23GO:0010198: synergid death5.15E-04
24GO:0033353: S-adenosylmethionine cycle5.15E-04
25GO:0045717: negative regulation of fatty acid biosynthetic process5.15E-04
26GO:0043039: tRNA aminoacylation5.15E-04
27GO:0005975: carbohydrate metabolic process5.24E-04
28GO:0033591: response to L-ascorbic acid8.37E-04
29GO:0046168: glycerol-3-phosphate catabolic process8.37E-04
30GO:0006065: UDP-glucuronate biosynthetic process8.37E-04
31GO:0090506: axillary shoot meristem initiation8.37E-04
32GO:0016042: lipid catabolic process8.56E-04
33GO:0010025: wax biosynthetic process9.01E-04
34GO:0007017: microtubule-based process1.09E-03
35GO:0006072: glycerol-3-phosphate metabolic process1.19E-03
36GO:0051016: barbed-end actin filament capping1.19E-03
37GO:0009650: UV protection1.19E-03
38GO:0010306: rhamnogalacturonan II biosynthetic process1.19E-03
39GO:0050482: arachidonic acid secretion1.19E-03
40GO:0009413: response to flooding1.19E-03
41GO:0009298: GDP-mannose biosynthetic process1.19E-03
42GO:0010371: regulation of gibberellin biosynthetic process1.19E-03
43GO:0016998: cell wall macromolecule catabolic process1.20E-03
44GO:0030245: cellulose catabolic process1.31E-03
45GO:0009831: plant-type cell wall modification involved in multidimensional cell growth1.42E-03
46GO:0019722: calcium-mediated signaling1.55E-03
47GO:0009765: photosynthesis, light harvesting1.59E-03
48GO:0006085: acetyl-CoA biosynthetic process1.59E-03
49GO:0006183: GTP biosynthetic process1.59E-03
50GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway1.59E-03
51GO:0009956: radial pattern formation1.59E-03
52GO:0015976: carbon utilization1.59E-03
53GO:0048359: mucilage metabolic process involved in seed coat development2.03E-03
54GO:0016120: carotene biosynthetic process2.03E-03
55GO:0045487: gibberellin catabolic process2.03E-03
56GO:0016123: xanthophyll biosynthetic process2.03E-03
57GO:0006665: sphingolipid metabolic process2.03E-03
58GO:0006014: D-ribose metabolic process2.50E-03
59GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway2.50E-03
60GO:0010583: response to cyclopentenone2.56E-03
61GO:0009828: plant-type cell wall loosening2.90E-03
62GO:0010067: procambium histogenesis3.00E-03
63GO:0009612: response to mechanical stimulus3.00E-03
64GO:0009554: megasporogenesis3.00E-03
65GO:0007267: cell-cell signaling3.08E-03
66GO:0009645: response to low light intensity stimulus3.54E-03
67GO:0006955: immune response3.54E-03
68GO:0042128: nitrate assimilation3.86E-03
69GO:0045010: actin nucleation4.10E-03
70GO:0006644: phospholipid metabolic process4.10E-03
71GO:0016311: dephosphorylation4.28E-03
72GO:0045490: pectin catabolic process4.59E-03
73GO:0006754: ATP biosynthetic process5.32E-03
74GO:0000902: cell morphogenesis5.32E-03
75GO:0015780: nucleotide-sugar transport5.32E-03
76GO:0016051: carbohydrate biosynthetic process5.71E-03
77GO:0000723: telomere maintenance5.97E-03
78GO:0042761: very long-chain fatty acid biosynthetic process5.97E-03
79GO:0016573: histone acetylation5.97E-03
80GO:0006949: syncytium formation6.65E-03
81GO:0010015: root morphogenesis7.35E-03
82GO:0009826: unidimensional cell growth7.63E-03
83GO:0016024: CDP-diacylglycerol biosynthetic process8.08E-03
84GO:0030036: actin cytoskeleton organization8.84E-03
85GO:0042538: hyperosmotic salinity response9.24E-03
86GO:0009664: plant-type cell wall organization9.24E-03
87GO:0010143: cutin biosynthetic process9.62E-03
88GO:0009933: meristem structural organization9.62E-03
89GO:0010207: photosystem II assembly9.62E-03
90GO:0010223: secondary shoot formation9.62E-03
91GO:0009266: response to temperature stimulus9.62E-03
92GO:0010167: response to nitrate1.04E-02
93GO:0009969: xyloglucan biosynthetic process1.04E-02
94GO:0006833: water transport1.13E-02
95GO:0006338: chromatin remodeling1.21E-02
96GO:0051017: actin filament bundle assembly1.21E-02
97GO:0006418: tRNA aminoacylation for protein translation1.30E-02
98GO:0006730: one-carbon metabolic process1.48E-02
99GO:0031348: negative regulation of defense response1.48E-02
100GO:0051726: regulation of cell cycle1.50E-02
101GO:0009294: DNA mediated transformation1.57E-02
102GO:0009411: response to UV1.57E-02
103GO:0001944: vasculature development1.57E-02
104GO:0010091: trichome branching1.67E-02
105GO:0010089: xylem development1.67E-02
106GO:0016117: carotenoid biosynthetic process1.77E-02
107GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.77E-02
108GO:0034220: ion transmembrane transport1.87E-02
109GO:0000413: protein peptidyl-prolyl isomerization1.87E-02
110GO:0010087: phloem or xylem histogenesis1.87E-02
111GO:0010305: leaf vascular tissue pattern formation1.97E-02
112GO:0048868: pollen tube development1.97E-02
113GO:0019252: starch biosynthetic process2.18E-02
114GO:0048510: regulation of timing of transition from vegetative to reproductive phase2.29E-02
115GO:0016125: sterol metabolic process2.62E-02
116GO:0009739: response to gibberellin2.75E-02
117GO:0007166: cell surface receptor signaling pathway2.81E-02
118GO:0051607: defense response to virus2.86E-02
119GO:0016126: sterol biosynthetic process2.98E-02
120GO:0009416: response to light stimulus3.54E-02
121GO:0009817: defense response to fungus, incompatible interaction3.59E-02
122GO:0009813: flavonoid biosynthetic process3.72E-02
123GO:0009407: toxin catabolic process3.85E-02
124GO:0051301: cell division3.93E-02
125GO:0010043: response to zinc ion3.98E-02
126GO:0007568: aging3.98E-02
127GO:0009860: pollen tube growth4.08E-02
128GO:0007049: cell cycle4.23E-02
129GO:0045087: innate immune response4.25E-02
130GO:0006631: fatty acid metabolic process4.81E-02
131GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.85E-02
RankGO TermAdjusted P value
1GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity0.00E+00
2GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
3GO:0004496: mevalonate kinase activity0.00E+00
4GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
5GO:0045435: lycopene epsilon cyclase activity0.00E+00
6GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity0.00E+00
7GO:0048307: ferredoxin-nitrite reductase activity0.00E+00
8GO:0050421: nitrite reductase (NO-forming) activity0.00E+00
9GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
10GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
11GO:0047889: ferredoxin-nitrate reductase activity0.00E+00
12GO:0016762: xyloglucan:xyloglucosyl transferase activity3.89E-07
13GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds7.89E-07
14GO:0016798: hydrolase activity, acting on glycosyl bonds1.68E-06
15GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity2.08E-05
16GO:0052689: carboxylic ester hydrolase activity9.11E-05
17GO:0051753: mannan synthase activity1.23E-04
18GO:0019901: protein kinase binding2.16E-04
19GO:0004560: alpha-L-fucosidase activity2.32E-04
20GO:0004013: adenosylhomocysteinase activity2.32E-04
21GO:0008184: glycogen phosphorylase activity2.32E-04
22GO:0042834: peptidoglycan binding2.32E-04
23GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity2.32E-04
24GO:0004831: tyrosine-tRNA ligase activity2.32E-04
25GO:0004645: phosphorylase activity2.32E-04
26GO:0009374: biotin binding2.32E-04
27GO:0004476: mannose-6-phosphate isomerase activity2.32E-04
28GO:0047259: glucomannan 4-beta-mannosyltransferase activity2.32E-04
29GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity2.32E-04
30GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors3.09E-04
31GO:0008289: lipid binding3.70E-04
32GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity5.15E-04
33GO:0003938: IMP dehydrogenase activity5.15E-04
34GO:0005504: fatty acid binding8.37E-04
35GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity8.37E-04
36GO:0003979: UDP-glucose 6-dehydrogenase activity8.37E-04
37GO:0004857: enzyme inhibitor activity9.95E-04
38GO:0003878: ATP citrate synthase activity1.19E-03
39GO:0043047: single-stranded telomeric DNA binding1.19E-03
40GO:0001872: (1->3)-beta-D-glucan binding1.19E-03
41GO:0051287: NAD binding1.28E-03
42GO:0030570: pectate lyase activity1.42E-03
43GO:0008810: cellulase activity1.42E-03
44GO:0052793: pectin acetylesterase activity1.59E-03
45GO:0045430: chalcone isomerase activity1.59E-03
46GO:0016788: hydrolase activity, acting on ester bonds1.64E-03
47GO:0009922: fatty acid elongase activity2.03E-03
48GO:0004623: phospholipase A2 activity2.03E-03
49GO:0003989: acetyl-CoA carboxylase activity2.03E-03
50GO:0004366: glycerol-3-phosphate O-acyltransferase activity2.50E-03
51GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity2.50E-03
52GO:0051015: actin filament binding2.73E-03
53GO:0004747: ribokinase activity3.00E-03
54GO:0005200: structural constituent of cytoskeleton3.08E-03
55GO:0042162: telomeric DNA binding3.54E-03
56GO:0043295: glutathione binding3.54E-03
57GO:0008865: fructokinase activity4.10E-03
58GO:0004693: cyclin-dependent protein serine/threonine kinase activity4.97E-03
59GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism5.32E-03
60GO:0015020: glucuronosyltransferase activity6.65E-03
61GO:0008378: galactosyltransferase activity8.08E-03
62GO:0003755: peptidyl-prolyl cis-trans isomerase activity8.59E-03
63GO:0004565: beta-galactosidase activity8.84E-03
64GO:0004089: carbonate dehydratase activity8.84E-03
65GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.13E-02
66GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.13E-02
67GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.13E-02
68GO:0045735: nutrient reservoir activity1.18E-02
69GO:0005528: FK506 binding1.21E-02
70GO:0030599: pectinesterase activity1.33E-02
71GO:0033612: receptor serine/threonine kinase binding1.39E-02
72GO:0004871: signal transducer activity1.40E-02
73GO:0008514: organic anion transmembrane transporter activity1.67E-02
74GO:0003924: GTPase activity1.73E-02
75GO:0005102: receptor binding1.77E-02
76GO:0004812: aminoacyl-tRNA ligase activity1.77E-02
77GO:0016829: lyase activity1.92E-02
78GO:0003713: transcription coactivator activity1.97E-02
79GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.29E-02
80GO:0016791: phosphatase activity2.62E-02
81GO:0016722: oxidoreductase activity, oxidizing metal ions2.74E-02
82GO:0015250: water channel activity2.98E-02
83GO:0008375: acetylglucosaminyltransferase activity3.22E-02
84GO:0030247: polysaccharide binding3.34E-02
85GO:0030145: manganese ion binding3.98E-02
86GO:0003993: acid phosphatase activity4.39E-02
87GO:0051539: 4 iron, 4 sulfur cluster binding4.67E-02
88GO:0004364: glutathione transferase activity4.95E-02
RankGO TermAdjusted P value
1GO:0005835: fatty acid synthase complex0.00E+00
2GO:0031225: anchored component of membrane7.70E-12
3GO:0005576: extracellular region2.70E-09
4GO:0048046: apoplast4.69E-09
5GO:0046658: anchored component of plasma membrane7.38E-09
6GO:0005618: cell wall8.76E-09
7GO:0005886: plasma membrane1.42E-07
8GO:0009505: plant-type cell wall1.33E-05
9GO:0009923: fatty acid elongase complex2.32E-04
10GO:0005697: telomerase holoenzyme complex5.15E-04
11GO:0009317: acetyl-CoA carboxylase complex8.37E-04
12GO:0009346: citrate lyase complex1.19E-03
13GO:0009331: glycerol-3-phosphate dehydrogenase complex1.19E-03
14GO:0015630: microtubule cytoskeleton1.19E-03
15GO:0016020: membrane2.56E-03
16GO:0009570: chloroplast stroma2.68E-03
17GO:0000123: histone acetyltransferase complex3.54E-03
18GO:0000784: nuclear chromosome, telomeric region4.70E-03
19GO:0045298: tubulin complex5.32E-03
20GO:0031977: thylakoid lumen6.78E-03
21GO:0005875: microtubule associated complex1.13E-02
22GO:0009579: thylakoid1.26E-02
23GO:0031410: cytoplasmic vesicle1.48E-02
24GO:0015629: actin cytoskeleton1.57E-02
25GO:0009506: plasmodesma1.75E-02
26GO:0009543: chloroplast thylakoid lumen1.78E-02
27GO:0005773: vacuole2.53E-02
28GO:0009535: chloroplast thylakoid membrane3.33E-02
29GO:0000151: ubiquitin ligase complex3.59E-02
30GO:0009534: chloroplast thylakoid4.46E-02
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Gene type



Gene DE type