co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G63840

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006182: cGMP biosynthetic process	0.00E+00
2	GO:0032780: negative regulation of ATPase activity	0.00E+00
3	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
4	GO:0042430: indole-containing compound metabolic process	0.00E+00
5	GO:0010360: negative regulation of anion channel activity	0.00E+00
6	GO:0030149: sphingolipid catabolic process	0.00E+00
7	GO:0001676: long-chain fatty acid metabolic process	1.08E-05
8	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	4.89E-05
9	GO:0043248: proteasome assembly	4.89E-05
10	GO:0010120: camalexin biosynthetic process	1.47E-04
11	GO:0048455: stamen formation	1.60E-04
12	GO:0051938: L-glutamate import	1.60E-04
13	GO:1990641: response to iron ion starvation	1.60E-04
14	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	1.60E-04
15	GO:1902361: mitochondrial pyruvate transmembrane transport	1.60E-04
16	GO:0046244: salicylic acid catabolic process	1.60E-04
17	GO:1901183: positive regulation of camalexin biosynthetic process	1.60E-04
18	GO:0019752: carboxylic acid metabolic process	3.65E-04
19	GO:1902000: homogentisate catabolic process	3.65E-04
20	GO:0097054: L-glutamate biosynthetic process	3.65E-04
21	GO:0043091: L-arginine import	3.65E-04
22	GO:0031648: protein destabilization	3.65E-04
23	GO:0015802: basic amino acid transport	3.65E-04
24	GO:0051788: response to misfolded protein	3.65E-04
25	GO:0006101: citrate metabolic process	3.65E-04
26	GO:0006850: mitochondrial pyruvate transport	3.65E-04
27	GO:0006952: defense response	3.76E-04
28	GO:0009072: aromatic amino acid family metabolic process	5.97E-04
29	GO:0010498: proteasomal protein catabolic process	5.97E-04
30	GO:0030433: ubiquitin-dependent ERAD pathway	7.98E-04
31	GO:0010255: glucose mediated signaling pathway	8.53E-04
32	GO:0010116: positive regulation of abscisic acid biosynthetic process	8.53E-04
33	GO:0002239: response to oomycetes	8.53E-04
34	GO:0006537: glutamate biosynthetic process	8.53E-04
35	GO:0006646: phosphatidylethanolamine biosynthetic process	1.13E-03
36	GO:0019676: ammonia assimilation cycle	1.13E-03
37	GO:0010363: regulation of plant-type hypersensitive response	1.13E-03
38	GO:0046283: anthocyanin-containing compound metabolic process	1.43E-03
39	GO:0006097: glyoxylate cycle	1.43E-03
40	GO:0007029: endoplasmic reticulum organization	1.43E-03
41	GO:0010193: response to ozone	1.44E-03
42	GO:0032259: methylation	1.69E-03
43	GO:0010252: auxin homeostasis	1.74E-03
44	GO:0006014: D-ribose metabolic process	1.76E-03
45	GO:0006561: proline biosynthetic process	1.76E-03
46	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	1.76E-03
47	GO:0035435: phosphate ion transmembrane transport	1.76E-03
48	GO:0006796: phosphate-containing compound metabolic process	1.76E-03
49	GO:0009408: response to heat	1.80E-03
50	GO:0009615: response to virus	2.07E-03
51	GO:0046686: response to cadmium ion	2.08E-03
52	GO:0009607: response to biotic stimulus	2.18E-03
53	GO:0010150: leaf senescence	2.37E-03
54	GO:1902074: response to salt	2.48E-03
55	GO:0048528: post-embryonic root development	2.48E-03
56	GO:1900056: negative regulation of leaf senescence	2.48E-03
57	GO:0019745: pentacyclic triterpenoid biosynthetic process	2.48E-03
58	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	2.48E-03
59	GO:0008219: cell death	2.69E-03
60	GO:2000070: regulation of response to water deprivation	2.88E-03
61	GO:0006102: isocitrate metabolic process	2.88E-03
62	GO:0009061: anaerobic respiration	2.88E-03
63	GO:0009617: response to bacterium	2.96E-03
64	GO:0009407: toxin catabolic process	2.96E-03
65	GO:0010043: response to zinc ion	3.10E-03
66	GO:0006979: response to oxidative stress	3.40E-03
67	GO:0006099: tricarboxylic acid cycle	3.55E-03
68	GO:0006631: fatty acid metabolic process	4.03E-03
69	GO:0043067: regulation of programmed cell death	4.17E-03
70	GO:0030042: actin filament depolymerization	4.17E-03
71	GO:0009688: abscisic acid biosynthetic process	4.64E-03
72	GO:0016310: phosphorylation	5.08E-03
73	GO:0006855: drug transmembrane transport	5.09E-03
74	GO:0015770: sucrose transport	5.12E-03
75	GO:0009807: lignan biosynthetic process	5.12E-03
76	GO:0009809: lignin biosynthetic process	5.88E-03
77	GO:0009718: anthocyanin-containing compound biosynthetic process	6.14E-03
78	GO:0006511: ubiquitin-dependent protein catabolic process	6.87E-03
79	GO:0006468: protein phosphorylation	7.11E-03
80	GO:0070588: calcium ion transmembrane transport	7.22E-03
81	GO:0042343: indole glucosinolate metabolic process	7.22E-03
82	GO:0009620: response to fungus	7.64E-03
83	GO:0006071: glycerol metabolic process	7.79E-03
84	GO:0006406: mRNA export from nucleus	8.38E-03
85	GO:0005992: trehalose biosynthetic process	8.38E-03
86	GO:0003333: amino acid transmembrane transport	9.59E-03
87	GO:0016998: cell wall macromolecule catabolic process	9.59E-03
88	GO:0098542: defense response to other organism	9.59E-03
89	GO:0031348: negative regulation of defense response	1.02E-02
90	GO:0019748: secondary metabolic process	1.02E-02
91	GO:0035428: hexose transmembrane transport	1.02E-02
92	GO:0006012: galactose metabolic process	1.09E-02
93	GO:0010118: stomatal movement	1.29E-02
94	GO:0046323: glucose import	1.36E-02
95	GO:0006520: cellular amino acid metabolic process	1.36E-02
96	GO:0019252: starch biosynthetic process	1.50E-02
97	GO:0008654: phospholipid biosynthetic process	1.50E-02
98	GO:0009851: auxin biosynthetic process	1.50E-02
99	GO:0002229: defense response to oomycetes	1.58E-02
100	GO:1901657: glycosyl compound metabolic process	1.73E-02
101	GO:0030163: protein catabolic process	1.73E-02
102	GO:0006464: cellular protein modification process	1.81E-02
103	GO:0009555: pollen development	1.84E-02
104	GO:0010029: regulation of seed germination	2.13E-02
105	GO:0009816: defense response to bacterium, incompatible interaction	2.13E-02
106	GO:0006974: cellular response to DNA damage stimulus	2.22E-02
107	GO:0006888: ER to Golgi vesicle-mediated transport	2.30E-02
108	GO:0009860: pollen tube growth	2.42E-02
109	GO:0009817: defense response to fungus, incompatible interaction	2.47E-02
110	GO:0048767: root hair elongation	2.56E-02
111	GO:0006499: N-terminal protein myristoylation	2.65E-02
112	GO:0009651: response to salt stress	2.71E-02
113	GO:0000724: double-strand break repair via homologous recombination	2.84E-02
114	GO:0009853: photorespiration	2.93E-02
115	GO:0044550: secondary metabolite biosynthetic process	3.03E-02
116	GO:0006839: mitochondrial transport	3.21E-02
117	GO:0045454: cell redox homeostasis	3.34E-02
118	GO:0042542: response to hydrogen peroxide	3.41E-02
119	GO:0009744: response to sucrose	3.51E-02
120	GO:0051707: response to other organism	3.51E-02
121	GO:0008643: carbohydrate transport	3.71E-02
122	GO:0009636: response to toxic substance	3.81E-02
123	GO:0009751: response to salicylic acid	4.05E-02
124	GO:0006629: lipid metabolic process	4.11E-02
125	GO:0009664: plant-type cell wall organization	4.12E-02
126	GO:0009846: pollen germination	4.12E-02
127	GO:0042538: hyperosmotic salinity response	4.12E-02
128	GO:0042742: defense response to bacterium	4.42E-02
129	GO:0051603: proteolysis involved in cellular protein catabolic process	4.44E-02
130	GO:0008152: metabolic process	4.52E-02
131	GO:0009909: regulation of flower development	4.66E-02

Rank	GO Term	Adjusted P value
1	GO:0042030: ATPase inhibitor activity	0.00E+00
2	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
3	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
4	GO:0051670: inulinase activity	0.00E+00
5	GO:0004622: lysophospholipase activity	0.00E+00
6	GO:0003846: 2-acylglycerol O-acyltransferase activity	0.00E+00
7	GO:0015930: glutamate synthase activity	0.00E+00
8	GO:0005524: ATP binding	7.29E-06
9	GO:0010279: indole-3-acetic acid amido synthetase activity	2.01E-05
10	GO:0036402: proteasome-activating ATPase activity	4.89E-05
11	GO:0102391: decanoate--CoA ligase activity	6.84E-05
12	GO:0004467: long-chain fatty acid-CoA ligase activity	9.14E-05
13	GO:0004307: ethanolaminephosphotransferase activity	1.60E-04
14	GO:0031219: levanase activity	1.60E-04
15	GO:0016041: glutamate synthase (ferredoxin) activity	1.60E-04
16	GO:0090430: caffeoyl-CoA: alcohol caffeoyl transferase activity	1.60E-04
17	GO:0016780: phosphotransferase activity, for other substituted phosphate groups	1.60E-04
18	GO:0051669: fructan beta-fructosidase activity	1.60E-04
19	GO:0008794: arsenate reductase (glutaredoxin) activity	2.97E-04
20	GO:0015036: disulfide oxidoreductase activity	3.65E-04
21	GO:0008517: folic acid transporter activity	3.65E-04
22	GO:0003994: aconitate hydratase activity	3.65E-04
23	GO:0030572: phosphatidyltransferase activity	3.65E-04
24	GO:0004142: diacylglycerol cholinephosphotransferase activity	3.65E-04
25	GO:0017025: TBP-class protein binding	4.92E-04
26	GO:0004364: glutathione transferase activity	5.03E-04
27	GO:0004383: guanylate cyclase activity	5.97E-04
28	GO:0050833: pyruvate transmembrane transporter activity	5.97E-04
29	GO:0015189: L-lysine transmembrane transporter activity	8.53E-04
30	GO:0001653: peptide receptor activity	8.53E-04
31	GO:0015181: arginine transmembrane transporter activity	8.53E-04
32	GO:0042299: lupeol synthase activity	8.53E-04
33	GO:0004031: aldehyde oxidase activity	1.13E-03
34	GO:0050302: indole-3-acetaldehyde oxidase activity	1.13E-03
35	GO:0005313: L-glutamate transmembrane transporter activity	1.13E-03
36	GO:0016866: intramolecular transferase activity	1.13E-03
37	GO:0016301: kinase activity	1.36E-03
38	GO:0031386: protein tag	1.43E-03
39	GO:0051538: 3 iron, 4 sulfur cluster binding	1.43E-03
40	GO:0015145: monosaccharide transmembrane transporter activity	1.43E-03
41	GO:0000104: succinate dehydrogenase activity	1.43E-03
42	GO:0008177: succinate dehydrogenase (ubiquinone) activity	1.43E-03
43	GO:0016462: pyrophosphatase activity	1.76E-03
44	GO:0031593: polyubiquitin binding	1.76E-03
45	GO:0009055: electron carrier activity	2.01E-03
46	GO:0004747: ribokinase activity	2.11E-03
47	GO:0003978: UDP-glucose 4-epimerase activity	2.11E-03
48	GO:0004143: diacylglycerol kinase activity	2.48E-03
49	GO:0016831: carboxy-lyase activity	2.48E-03
50	GO:0008506: sucrose:proton symporter activity	2.48E-03
51	GO:0004427: inorganic diphosphatase activity	2.48E-03
52	GO:0008865: fructokinase activity	2.88E-03
53	GO:0003951: NAD+ kinase activity	3.29E-03
54	GO:0016887: ATPase activity	3.51E-03
55	GO:0008889: glycerophosphodiester phosphodiesterase activity	3.72E-03
56	GO:0008168: methyltransferase activity	3.92E-03
57	GO:0015174: basic amino acid transmembrane transporter activity	4.17E-03
58	GO:0045309: protein phosphorylated amino acid binding	4.17E-03
59	GO:0008171: O-methyltransferase activity	4.64E-03
60	GO:0019904: protein domain specific binding	5.12E-03
61	GO:0008559: xenobiotic-transporting ATPase activity	5.12E-03
62	GO:0004129: cytochrome-c oxidase activity	5.12E-03
63	GO:0005315: inorganic phosphate transmembrane transporter activity	6.14E-03
64	GO:0015114: phosphate ion transmembrane transporter activity	6.14E-03
65	GO:0005388: calcium-transporting ATPase activity	6.14E-03
66	GO:0004674: protein serine/threonine kinase activity	7.06E-03
67	GO:0005516: calmodulin binding	8.02E-03
68	GO:0015035: protein disulfide oxidoreductase activity	8.62E-03
69	GO:0043424: protein histidine kinase binding	8.97E-03
70	GO:0004298: threonine-type endopeptidase activity	9.59E-03
71	GO:0022891: substrate-specific transmembrane transporter activity	1.09E-02
72	GO:0005509: calcium ion binding	1.11E-02
73	GO:0005199: structural constituent of cell wall	1.36E-02
74	GO:0005355: glucose transmembrane transporter activity	1.43E-02
75	GO:0008194: UDP-glycosyltransferase activity	1.62E-02
76	GO:0008483: transaminase activity	1.89E-02
77	GO:0051213: dioxygenase activity	2.05E-02
78	GO:0102483: scopolin beta-glucosidase activity	2.30E-02
79	GO:0030247: polysaccharide binding	2.30E-02
80	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.39E-02
81	GO:0043531: ADP binding	2.47E-02
82	GO:0015238: drug transmembrane transporter activity	2.56E-02
83	GO:0050660: flavin adenine dinucleotide binding	2.60E-02
84	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.74E-02
85	GO:0050897: cobalt ion binding	2.74E-02
86	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.93E-02
87	GO:0008422: beta-glucosidase activity	3.12E-02
88	GO:0051539: 4 iron, 4 sulfur cluster binding	3.21E-02
89	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.60E-02
90	GO:0051537: 2 iron, 2 sulfur cluster binding	3.71E-02
91	GO:0003924: GTPase activity	4.11E-02
92	GO:0005506: iron ion binding	4.33E-02
93	GO:0015171: amino acid transmembrane transporter activity	4.66E-02
94	GO:0045735: nutrient reservoir activity	4.88E-02
95	GO:0005215: transporter activity	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	6.21E-07
2	GO:0000502: proteasome complex	4.57E-06
3	GO:0008540: proteasome regulatory particle, base subcomplex	4.71E-06
4	GO:0031597: cytosolic proteasome complex	6.84E-05
5	GO:0031595: nuclear proteasome complex	9.14E-05
6	GO:0005794: Golgi apparatus	2.57E-04
7	GO:0031314: extrinsic component of mitochondrial inner membrane	3.65E-04
8	GO:0009530: primary cell wall	5.97E-04
9	GO:0005751: mitochondrial respiratory chain complex IV	5.97E-04
10	GO:0046861: glyoxysomal membrane	5.97E-04
11	GO:0031305: integral component of mitochondrial inner membrane	2.88E-03
12	GO:0045273: respiratory chain complex II	2.88E-03
13	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	2.88E-03
14	GO:0005773: vacuole	2.93E-03
15	GO:0009514: glyoxysome	3.29E-03
16	GO:0005618: cell wall	4.43E-03
17	GO:0008541: proteasome regulatory particle, lid subcomplex	5.12E-03
18	GO:0016020: membrane	5.36E-03
19	GO:0005635: nuclear envelope	6.30E-03
20	GO:0045271: respiratory chain complex I	8.97E-03
21	GO:0005839: proteasome core complex	9.59E-03
22	GO:0015629: actin cytoskeleton	1.09E-02
23	GO:0005829: cytosol	1.50E-02
24	GO:0005777: peroxisome	2.19E-02
25	GO:0009506: plasmodesma	2.42E-02
26	GO:0000325: plant-type vacuole	2.74E-02
27	GO:0005774: vacuolar membrane	2.86E-02
28	GO:0005819: spindle	3.12E-02
29	GO:0016021: integral component of membrane	3.70E-02
30	GO:0005743: mitochondrial inner membrane	3.82E-02
31	GO:0031966: mitochondrial membrane	4.12E-02
32	GO:0005747: mitochondrial respiratory chain complex I	4.99E-02