co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G63240

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045014: negative regulation of transcription by glucose	0.00E+00
2	GO:0015805: S-adenosyl-L-methionine transport	0.00E+00
3	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
4	GO:0009638: phototropism	1.41E-05
5	GO:0010362: negative regulation of anion channel activity by blue light	2.64E-05
6	GO:0010480: microsporocyte differentiation	2.64E-05
7	GO:0043087: regulation of GTPase activity	2.64E-05
8	GO:0010115: regulation of abscisic acid biosynthetic process	6.72E-05
9	GO:0010118: stomatal movement	1.00E-04
10	GO:0006552: leucine catabolic process	2.39E-04
11	GO:0015846: polyamine transport	2.39E-04
12	GO:0009902: chloroplast relocation	2.39E-04
13	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.78E-04
14	GO:0046777: protein autophosphorylation	2.91E-04
15	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	3.78E-04
16	GO:0006574: valine catabolic process	3.78E-04
17	GO:0010304: PSII associated light-harvesting complex II catabolic process	3.78E-04
18	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	3.78E-04
19	GO:0009733: response to auxin	3.92E-04
20	GO:0009082: branched-chain amino acid biosynthetic process	4.53E-04
21	GO:0009942: longitudinal axis specification	4.53E-04
22	GO:0048437: floral organ development	5.30E-04
23	GO:0048564: photosystem I assembly	6.10E-04
24	GO:0015996: chlorophyll catabolic process	6.94E-04
25	GO:0048507: meristem development	7.80E-04
26	GO:0048589: developmental growth	7.80E-04
27	GO:0045036: protein targeting to chloroplast	9.59E-04
28	GO:0035556: intracellular signal transduction	9.63E-04
29	GO:0048229: gametophyte development	1.05E-03
30	GO:0010152: pollen maturation	1.15E-03
31	GO:0010102: lateral root morphogenesis	1.25E-03
32	GO:0009785: blue light signaling pathway	1.25E-03
33	GO:0010075: regulation of meristem growth	1.25E-03
34	GO:0010143: cutin biosynthetic process	1.35E-03
35	GO:0009934: regulation of meristem structural organization	1.35E-03
36	GO:0007010: cytoskeleton organization	1.67E-03
37	GO:0008299: isoprenoid biosynthetic process	1.78E-03
38	GO:0016226: iron-sulfur cluster assembly	2.02E-03
39	GO:0009658: chloroplast organization	2.11E-03
40	GO:0009686: gibberellin biosynthetic process	2.14E-03
41	GO:0048443: stamen development	2.26E-03
42	GO:0048653: anther development	2.52E-03
43	GO:0010051: xylem and phloem pattern formation	2.52E-03
44	GO:0010268: brassinosteroid homeostasis	2.65E-03
45	GO:0010305: leaf vascular tissue pattern formation	2.65E-03
46	GO:0009791: post-embryonic development	2.91E-03
47	GO:0016132: brassinosteroid biosynthetic process	3.05E-03
48	GO:0016125: sterol metabolic process	3.47E-03
49	GO:0046686: response to cadmium ion	3.79E-03
50	GO:0009816: defense response to bacterium, incompatible interaction	4.06E-03
51	GO:0009753: response to jasmonic acid	4.09E-03
52	GO:0018298: protein-chromophore linkage	4.69E-03
53	GO:0000160: phosphorelay signal transduction system	4.85E-03
54	GO:0007165: signal transduction	5.48E-03
55	GO:0009637: response to blue light	5.52E-03
56	GO:0006839: mitochondrial transport	6.04E-03
57	GO:0016310: phosphorylation	6.74E-03
58	GO:0009416: response to light stimulus	6.74E-03
59	GO:0006468: protein phosphorylation	7.25E-03
60	GO:0018105: peptidyl-serine phosphorylation	1.06E-02
61	GO:0042744: hydrogen peroxide catabolic process	1.33E-02
62	GO:0009790: embryo development	1.35E-02
63	GO:0030154: cell differentiation	1.49E-02
64	GO:0007623: circadian rhythm	1.52E-02
65	GO:0010228: vegetative to reproductive phase transition of meristem	1.57E-02
66	GO:0009739: response to gibberellin	1.65E-02
67	GO:0007166: cell surface receptor signaling pathway	1.67E-02
68	GO:0010468: regulation of gene expression	1.73E-02
69	GO:0055114: oxidation-reduction process	1.89E-02
70	GO:0005975: carbohydrate metabolic process	2.08E-02
71	GO:0006970: response to osmotic stress	2.19E-02
72	GO:0009723: response to ethylene	2.30E-02
73	GO:0009751: response to salicylic acid	3.16E-02
74	GO:0048364: root development	3.29E-02
75	GO:0006357: regulation of transcription from RNA polymerase II promoter	3.90E-02
76	GO:0009734: auxin-activated signaling pathway	4.07E-02
77	GO:0016567: protein ubiquitination	4.16E-02
78	GO:0009908: flower development	4.47E-02
79	GO:0009735: response to cytokinin	4.51E-02
80	GO:0009738: abscisic acid-activated signaling pathway	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
2	GO:0019808: polyamine binding	0.00E+00
3	GO:0051777: ent-kaurenoate oxidase activity	2.64E-05
4	GO:0004856: xylulokinase activity	2.64E-05
5	GO:0034256: chlorophyll(ide) b reductase activity	2.64E-05
6	GO:0004163: diphosphomevalonate decarboxylase activity	2.64E-05
7	GO:0030941: chloroplast targeting sequence binding	2.64E-05
8	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	6.72E-05
9	GO:0016301: kinase activity	1.02E-04
10	GO:0032947: protein complex scaffold	1.18E-04
11	GO:0070402: NADPH binding	1.18E-04
12	GO:0052656: L-isoleucine transaminase activity	1.76E-04
13	GO:0009882: blue light photoreceptor activity	1.76E-04
14	GO:0052654: L-leucine transaminase activity	1.76E-04
15	GO:0052655: L-valine transaminase activity	1.76E-04
16	GO:0004084: branched-chain-amino-acid transaminase activity	2.39E-04
17	GO:0010011: auxin binding	2.39E-04
18	GO:0051861: glycolipid binding	2.39E-04
19	GO:0016773: phosphotransferase activity, alcohol group as acceptor	3.07E-04
20	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	4.53E-04
21	GO:0004674: protein serine/threonine kinase activity	7.87E-04
22	GO:0004565: beta-galactosidase activity	1.25E-03
23	GO:0000155: phosphorelay sensor kinase activity	1.25E-03
24	GO:0051536: iron-sulfur cluster binding	1.67E-03
25	GO:0042802: identical protein binding	1.74E-03
26	GO:0004707: MAP kinase activity	1.90E-03
27	GO:0033612: receptor serine/threonine kinase binding	1.90E-03
28	GO:0005524: ATP binding	1.94E-03
29	GO:0010181: FMN binding	2.78E-03
30	GO:0016853: isomerase activity	2.78E-03
31	GO:0004518: nuclease activity	3.19E-03
32	GO:0004672: protein kinase activity	3.52E-03
33	GO:0016722: oxidoreductase activity, oxidizing metal ions	3.62E-03
34	GO:0005515: protein binding	4.08E-03
35	GO:0009931: calcium-dependent protein serine/threonine kinase activity	4.22E-03
36	GO:0004683: calmodulin-dependent protein kinase activity	4.37E-03
37	GO:0005096: GTPase activator activity	4.85E-03
38	GO:0030145: manganese ion binding	5.18E-03
39	GO:0043621: protein self-association	6.94E-03
40	GO:0035091: phosphatidylinositol binding	6.94E-03
41	GO:0005198: structural molecule activity	7.12E-03
42	GO:0005516: calmodulin binding	1.01E-02
43	GO:0005506: iron ion binding	1.35E-02
44	GO:0044212: transcription regulatory region DNA binding	1.37E-02
45	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.45E-02
46	GO:0008017: microtubule binding	1.57E-02
47	GO:0004601: peroxidase activity	2.07E-02
48	GO:0020037: heme binding	2.16E-02
49	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	2.75E-02
50	GO:0004871: signal transducer activity	2.84E-02
51	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	2.97E-02

Rank	GO Term	Adjusted P value
1	GO:0042597: periplasmic space	0.00E+00
2	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
3	GO:0009505: plant-type cell wall	4.65E-04
4	GO:0031359: integral component of chloroplast outer membrane	5.30E-04
5	GO:0009506: plasmodesma	1.14E-03
6	GO:0009574: preprophase band	1.25E-03
7	GO:0005886: plasma membrane	3.02E-03
8	GO:0009707: chloroplast outer membrane	4.69E-03
9	GO:0009536: plastid	1.68E-02
10	GO:0005874: microtubule	2.36E-02
11	GO:0031969: chloroplast membrane	2.42E-02
12	GO:0005743: mitochondrial inner membrane	3.03E-02