GO Enrichment Analysis of Co-expressed Genes with
AT1G62780
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 2 | GO:0015742: alpha-ketoglutarate transport | 0.00E+00 |
| 3 | GO:0042407: cristae formation | 0.00E+00 |
| 4 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 5 | GO:0006223: uracil salvage | 0.00E+00 |
| 6 | GO:0018160: peptidyl-pyrromethane cofactor linkage | 0.00E+00 |
| 7 | GO:0015995: chlorophyll biosynthetic process | 9.38E-10 |
| 8 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.80E-06 |
| 9 | GO:0009735: response to cytokinin | 2.21E-06 |
| 10 | GO:0051085: chaperone mediated protein folding requiring cofactor | 4.33E-06 |
| 11 | GO:0032544: plastid translation | 6.66E-05 |
| 12 | GO:0006783: heme biosynthetic process | 8.24E-05 |
| 13 | GO:0016031: tRNA import into mitochondrion | 9.50E-05 |
| 14 | GO:0010028: xanthophyll cycle | 9.50E-05 |
| 15 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.00E-04 |
| 16 | GO:0006423: cysteinyl-tRNA aminoacylation | 2.24E-04 |
| 17 | GO:0080183: response to photooxidative stress | 2.24E-04 |
| 18 | GO:0006729: tetrahydrobiopterin biosynthetic process | 2.24E-04 |
| 19 | GO:0006568: tryptophan metabolic process | 2.24E-04 |
| 20 | GO:0051604: protein maturation | 3.73E-04 |
| 21 | GO:0071492: cellular response to UV-A | 3.73E-04 |
| 22 | GO:0006760: folic acid-containing compound metabolic process | 3.73E-04 |
| 23 | GO:0007005: mitochondrion organization | 4.00E-04 |
| 24 | GO:0015979: photosynthesis | 4.12E-04 |
| 25 | GO:0006457: protein folding | 4.29E-04 |
| 26 | GO:0015729: oxaloacetate transport | 5.37E-04 |
| 27 | GO:0006241: CTP biosynthetic process | 5.37E-04 |
| 28 | GO:0006165: nucleoside diphosphate phosphorylation | 5.37E-04 |
| 29 | GO:0006228: UTP biosynthetic process | 5.37E-04 |
| 30 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 5.37E-04 |
| 31 | GO:0006986: response to unfolded protein | 5.37E-04 |
| 32 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 5.37E-04 |
| 33 | GO:0006183: GTP biosynthetic process | 7.14E-04 |
| 34 | GO:0030007: cellular potassium ion homeostasis | 7.14E-04 |
| 35 | GO:0044206: UMP salvage | 7.14E-04 |
| 36 | GO:0046656: folic acid biosynthetic process | 7.14E-04 |
| 37 | GO:0019676: ammonia assimilation cycle | 7.14E-04 |
| 38 | GO:0015743: malate transport | 7.14E-04 |
| 39 | GO:0071486: cellular response to high light intensity | 7.14E-04 |
| 40 | GO:0032502: developmental process | 7.76E-04 |
| 41 | GO:0071423: malate transmembrane transport | 9.02E-04 |
| 42 | GO:0043097: pyrimidine nucleoside salvage | 9.02E-04 |
| 43 | GO:0042742: defense response to bacterium | 9.45E-04 |
| 44 | GO:0006206: pyrimidine nucleobase metabolic process | 1.10E-03 |
| 45 | GO:0006796: phosphate-containing compound metabolic process | 1.10E-03 |
| 46 | GO:0010190: cytochrome b6f complex assembly | 1.10E-03 |
| 47 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.10E-03 |
| 48 | GO:0033365: protein localization to organelle | 1.10E-03 |
| 49 | GO:0009627: systemic acquired resistance | 1.15E-03 |
| 50 | GO:0042026: protein refolding | 1.31E-03 |
| 51 | GO:1901259: chloroplast rRNA processing | 1.31E-03 |
| 52 | GO:0017148: negative regulation of translation | 1.31E-03 |
| 53 | GO:0046654: tetrahydrofolate biosynthetic process | 1.31E-03 |
| 54 | GO:0006826: iron ion transport | 1.54E-03 |
| 55 | GO:0009658: chloroplast organization | 1.66E-03 |
| 56 | GO:0048564: photosystem I assembly | 1.78E-03 |
| 57 | GO:0042255: ribosome assembly | 1.78E-03 |
| 58 | GO:0006353: DNA-templated transcription, termination | 1.78E-03 |
| 59 | GO:0009657: plastid organization | 2.03E-03 |
| 60 | GO:0098656: anion transmembrane transport | 2.29E-03 |
| 61 | GO:0009245: lipid A biosynthetic process | 2.29E-03 |
| 62 | GO:0034765: regulation of ion transmembrane transport | 2.29E-03 |
| 63 | GO:0043067: regulation of programmed cell death | 2.56E-03 |
| 64 | GO:0031425: chloroplast RNA processing | 2.56E-03 |
| 65 | GO:0019538: protein metabolic process | 2.85E-03 |
| 66 | GO:0045036: protein targeting to chloroplast | 2.85E-03 |
| 67 | GO:0010020: chloroplast fission | 4.08E-03 |
| 68 | GO:0019253: reductive pentose-phosphate cycle | 4.08E-03 |
| 69 | GO:0010039: response to iron ion | 4.41E-03 |
| 70 | GO:0009116: nucleoside metabolic process | 5.10E-03 |
| 71 | GO:0051260: protein homooligomerization | 5.83E-03 |
| 72 | GO:0009790: embryo development | 5.97E-03 |
| 73 | GO:0006633: fatty acid biosynthetic process | 6.42E-03 |
| 74 | GO:0006413: translational initiation | 6.58E-03 |
| 75 | GO:0009411: response to UV | 6.58E-03 |
| 76 | GO:0042335: cuticle development | 7.79E-03 |
| 77 | GO:0010197: polar nucleus fusion | 8.21E-03 |
| 78 | GO:0009741: response to brassinosteroid | 8.21E-03 |
| 79 | GO:0006814: sodium ion transport | 8.63E-03 |
| 80 | GO:0010583: response to cyclopentenone | 9.96E-03 |
| 81 | GO:0010286: heat acclimation | 1.14E-02 |
| 82 | GO:0071805: potassium ion transmembrane transport | 1.14E-02 |
| 83 | GO:0010027: thylakoid membrane organization | 1.23E-02 |
| 84 | GO:0010029: regulation of seed germination | 1.28E-02 |
| 85 | GO:0008219: cell death | 1.49E-02 |
| 86 | GO:0009793: embryo development ending in seed dormancy | 1.50E-02 |
| 87 | GO:0006499: N-terminal protein myristoylation | 1.59E-02 |
| 88 | GO:0010119: regulation of stomatal movement | 1.65E-02 |
| 89 | GO:0006839: mitochondrial transport | 1.93E-02 |
| 90 | GO:0042542: response to hydrogen peroxide | 2.05E-02 |
| 91 | GO:0009644: response to high light intensity | 2.23E-02 |
| 92 | GO:0042538: hyperosmotic salinity response | 2.47E-02 |
| 93 | GO:0009585: red, far-red light phototransduction | 2.60E-02 |
| 94 | GO:0009409: response to cold | 2.64E-02 |
| 95 | GO:0006096: glycolytic process | 2.93E-02 |
| 96 | GO:0009624: response to nematode | 3.34E-02 |
| 97 | GO:0055085: transmembrane transport | 4.51E-02 |
| 98 | GO:0016036: cellular response to phosphate starvation | 4.69E-02 |
| 99 | GO:0006412: translation | 4.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015269: calcium-activated potassium channel activity | 0.00E+00 |
| 2 | GO:0004418: hydroxymethylbilane synthase activity | 0.00E+00 |
| 3 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 4 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 5 | GO:0015139: alpha-ketoglutarate transmembrane transporter activity | 0.00E+00 |
| 6 | GO:0016851: magnesium chelatase activity | 4.33E-06 |
| 7 | GO:0051087: chaperone binding | 1.02E-05 |
| 8 | GO:0051082: unfolded protein binding | 4.02E-05 |
| 9 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 9.50E-05 |
| 10 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 9.50E-05 |
| 11 | GO:0004853: uroporphyrinogen decarboxylase activity | 9.50E-05 |
| 12 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 9.50E-05 |
| 13 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 9.50E-05 |
| 14 | GO:0102083: 7,8-dihydromonapterin aldolase activity | 2.24E-04 |
| 15 | GO:0004312: fatty acid synthase activity | 2.24E-04 |
| 16 | GO:0004817: cysteine-tRNA ligase activity | 2.24E-04 |
| 17 | GO:0000774: adenyl-nucleotide exchange factor activity | 2.24E-04 |
| 18 | GO:0015367: oxoglutarate:malate antiporter activity | 2.24E-04 |
| 19 | GO:0004150: dihydroneopterin aldolase activity | 2.24E-04 |
| 20 | GO:0004751: ribose-5-phosphate isomerase activity | 3.73E-04 |
| 21 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 3.73E-04 |
| 22 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 5.37E-04 |
| 23 | GO:0015131: oxaloacetate transmembrane transporter activity | 5.37E-04 |
| 24 | GO:0016656: monodehydroascorbate reductase (NADH) activity | 5.37E-04 |
| 25 | GO:0004550: nucleoside diphosphate kinase activity | 5.37E-04 |
| 26 | GO:0043023: ribosomal large subunit binding | 5.37E-04 |
| 27 | GO:0004845: uracil phosphoribosyltransferase activity | 7.14E-04 |
| 28 | GO:0004040: amidase activity | 9.02E-04 |
| 29 | GO:0031177: phosphopantetheine binding | 1.10E-03 |
| 30 | GO:0016462: pyrophosphatase activity | 1.10E-03 |
| 31 | GO:0015271: outward rectifier potassium channel activity | 1.10E-03 |
| 32 | GO:0004849: uridine kinase activity | 1.31E-03 |
| 33 | GO:0000035: acyl binding | 1.31E-03 |
| 34 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.33E-03 |
| 35 | GO:0004427: inorganic diphosphatase activity | 1.54E-03 |
| 36 | GO:0015140: malate transmembrane transporter activity | 1.54E-03 |
| 37 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 1.78E-03 |
| 38 | GO:0005267: potassium channel activity | 2.03E-03 |
| 39 | GO:0005507: copper ion binding | 2.47E-03 |
| 40 | GO:0042803: protein homodimerization activity | 2.90E-03 |
| 41 | GO:0044183: protein binding involved in protein folding | 3.14E-03 |
| 42 | GO:0000049: tRNA binding | 3.44E-03 |
| 43 | GO:0015266: protein channel activity | 3.76E-03 |
| 44 | GO:0005315: inorganic phosphate transmembrane transporter activity | 3.76E-03 |
| 45 | GO:0031072: heat shock protein binding | 3.76E-03 |
| 46 | GO:0043424: protein histidine kinase binding | 5.46E-03 |
| 47 | GO:0005216: ion channel activity | 5.46E-03 |
| 48 | GO:0004176: ATP-dependent peptidase activity | 5.83E-03 |
| 49 | GO:0016887: ATPase activity | 6.20E-03 |
| 50 | GO:0022891: substrate-specific transmembrane transporter activity | 6.58E-03 |
| 51 | GO:0003727: single-stranded RNA binding | 6.98E-03 |
| 52 | GO:0008514: organic anion transmembrane transporter activity | 6.98E-03 |
| 53 | GO:0003743: translation initiation factor activity | 8.25E-03 |
| 54 | GO:0008483: transaminase activity | 1.14E-02 |
| 55 | GO:0008237: metallopeptidase activity | 1.14E-02 |
| 56 | GO:0016168: chlorophyll binding | 1.28E-02 |
| 57 | GO:0008236: serine-type peptidase activity | 1.43E-02 |
| 58 | GO:0003746: translation elongation factor activity | 1.76E-02 |
| 59 | GO:0043621: protein self-association | 2.23E-02 |
| 60 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.35E-02 |
| 61 | GO:0003690: double-stranded DNA binding | 2.67E-02 |
| 62 | GO:0003729: mRNA binding | 2.97E-02 |
| 63 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 3.00E-02 |
| 64 | GO:0004650: polygalacturonase activity | 3.14E-02 |
| 65 | GO:0022857: transmembrane transporter activity | 3.20E-02 |
| 66 | GO:0003723: RNA binding | 3.30E-02 |
| 67 | GO:0019843: rRNA binding | 3.92E-02 |
| 68 | GO:0016829: lyase activity | 4.15E-02 |
| 69 | GO:0030170: pyridoxal phosphate binding | 4.23E-02 |
| 70 | GO:0003735: structural constituent of ribosome | 4.25E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 8.63E-52 |
| 2 | GO:0009570: chloroplast stroma | 7.88E-32 |
| 3 | GO:0009941: chloroplast envelope | 4.26E-28 |
| 4 | GO:0009579: thylakoid | 9.54E-14 |
| 5 | GO:0009536: plastid | 1.70E-10 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 3.72E-10 |
| 7 | GO:0009706: chloroplast inner membrane | 4.02E-05 |
| 8 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 9.50E-05 |
| 9 | GO:0009508: plastid chromosome | 1.88E-04 |
| 10 | GO:0009654: photosystem II oxygen evolving complex | 3.32E-04 |
| 11 | GO:0010007: magnesium chelatase complex | 3.73E-04 |
| 12 | GO:0009526: plastid envelope | 7.14E-04 |
| 13 | GO:0005759: mitochondrial matrix | 8.60E-04 |
| 14 | GO:0055035: plastid thylakoid membrane | 9.02E-04 |
| 15 | GO:0009295: nucleoid | 9.27E-04 |
| 16 | GO:0010319: stromule | 9.27E-04 |
| 17 | GO:0005840: ribosome | 1.02E-03 |
| 18 | GO:0009534: chloroplast thylakoid | 1.92E-03 |
| 19 | GO:0009539: photosystem II reaction center | 2.03E-03 |
| 20 | GO:0009543: chloroplast thylakoid lumen | 5.12E-03 |
| 21 | GO:0009532: plastid stroma | 5.83E-03 |
| 22 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 6.98E-03 |
| 23 | GO:0009523: photosystem II | 9.06E-03 |
| 24 | GO:0019898: extrinsic component of membrane | 9.06E-03 |
| 25 | GO:0005778: peroxisomal membrane | 1.14E-02 |
| 26 | GO:0030529: intracellular ribonucleoprotein complex | 1.23E-02 |
| 27 | GO:0031969: chloroplast membrane | 1.36E-02 |
| 28 | GO:0009707: chloroplast outer membrane | 1.49E-02 |
| 29 | GO:0015934: large ribosomal subunit | 1.65E-02 |
| 30 | GO:0005739: mitochondrion | 1.75E-02 |
| 31 | GO:0031977: thylakoid lumen | 1.99E-02 |
| 32 | GO:0022626: cytosolic ribosome | 3.41E-02 |
| 33 | GO:0005623: cell | 4.00E-02 |