Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G62300

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032780: negative regulation of ATPase activity0.00E+00
2GO:1900103: positive regulation of endoplasmic reticulum unfolded protein response0.00E+00
3GO:0010265: SCF complex assembly7.23E-05
4GO:0046167: glycerol-3-phosphate biosynthetic process7.23E-05
5GO:0000303: response to superoxide7.23E-05
6GO:0034214: protein hexamerization7.23E-05
7GO:0031648: protein destabilization1.74E-04
8GO:0071395: cellular response to jasmonic acid stimulus1.74E-04
9GO:0006641: triglyceride metabolic process1.74E-04
10GO:0051258: protein polymerization1.74E-04
11GO:0019563: glycerol catabolic process2.93E-04
12GO:0010359: regulation of anion channel activity2.93E-04
13GO:0006556: S-adenosylmethionine biosynthetic process2.93E-04
14GO:0070676: intralumenal vesicle formation4.23E-04
15GO:0001676: long-chain fatty acid metabolic process4.23E-04
16GO:0045017: glycerolipid biosynthetic process4.23E-04
17GO:0006072: glycerol-3-phosphate metabolic process4.23E-04
18GO:0006809: nitric oxide biosynthetic process4.23E-04
19GO:0006468: protein phosphorylation5.05E-04
20GO:0010188: response to microbial phytotoxin5.65E-04
21GO:0006464: cellular protein modification process6.19E-04
22GO:0006914: autophagy6.19E-04
23GO:0015031: protein transport7.56E-04
24GO:1902456: regulation of stomatal opening8.73E-04
25GO:1900425: negative regulation of defense response to bacterium8.73E-04
26GO:0070814: hydrogen sulfide biosynthetic process8.73E-04
27GO:0048317: seed morphogenesis8.73E-04
28GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione8.73E-04
29GO:0071470: cellular response to osmotic stress1.04E-03
30GO:0080060: integument development1.04E-03
31GO:0009094: L-phenylalanine biosynthetic process1.04E-03
32GO:0009867: jasmonic acid mediated signaling pathway1.18E-03
33GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway1.21E-03
34GO:0015937: coenzyme A biosynthetic process1.21E-03
35GO:0010038: response to metal ion1.21E-03
36GO:0045995: regulation of embryonic development1.21E-03
37GO:0071446: cellular response to salicylic acid stimulus1.21E-03
38GO:0043068: positive regulation of programmed cell death1.40E-03
39GO:0006102: isocitrate metabolic process1.40E-03
40GO:0006631: fatty acid metabolic process1.40E-03
41GO:0009787: regulation of abscisic acid-activated signaling pathway1.40E-03
42GO:0046777: protein autophosphorylation1.50E-03
43GO:0090333: regulation of stomatal closure1.80E-03
44GO:0000103: sulfate assimilation2.23E-03
45GO:0019538: protein metabolic process2.23E-03
46GO:0012501: programmed cell death2.70E-03
47GO:0006396: RNA processing2.94E-03
48GO:0010102: lateral root morphogenesis2.94E-03
49GO:0007034: vacuolar transport3.19E-03
50GO:0002237: response to molecule of bacterial origin3.19E-03
51GO:0010053: root epidermal cell differentiation3.44E-03
52GO:2000377: regulation of reactive oxygen species metabolic process3.98E-03
53GO:0031408: oxylipin biosynthetic process4.54E-03
54GO:0046686: response to cadmium ion4.72E-03
55GO:0009814: defense response, incompatible interaction4.83E-03
56GO:0031348: negative regulation of defense response4.83E-03
57GO:0006730: one-carbon metabolic process4.83E-03
58GO:0009693: ethylene biosynthetic process5.13E-03
59GO:0009306: protein secretion5.43E-03
60GO:0070417: cellular response to cold5.74E-03
61GO:0009617: response to bacterium5.86E-03
62GO:0010087: phloem or xylem histogenesis6.05E-03
63GO:0071472: cellular response to salt stress6.38E-03
64GO:0048544: recognition of pollen6.70E-03
65GO:0042752: regulation of circadian rhythm6.70E-03
66GO:0006511: ubiquitin-dependent protein catabolic process6.83E-03
67GO:0048510: regulation of timing of transition from vegetative to reproductive phase7.38E-03
68GO:0002229: defense response to oomycetes7.38E-03
69GO:0010193: response to ozone7.38E-03
70GO:0010583: response to cyclopentenone7.72E-03
71GO:0016032: viral process7.72E-03
72GO:0071281: cellular response to iron ion8.07E-03
73GO:0006970: response to osmotic stress8.18E-03
74GO:0007049: cell cycle8.47E-03
75GO:0006904: vesicle docking involved in exocytosis8.79E-03
76GO:0016310: phosphorylation9.39E-03
77GO:0080167: response to karrikin9.41E-03
78GO:0009816: defense response to bacterium, incompatible interaction9.92E-03
79GO:0006950: response to stress1.07E-02
80GO:0006888: ER to Golgi vesicle-mediated transport1.07E-02
81GO:0006979: response to oxidative stress1.15E-02
82GO:0010119: regulation of stomatal movement1.27E-02
83GO:0006099: tricarboxylic acid cycle1.40E-02
84GO:0009753: response to jasmonic acid1.50E-02
85GO:0008152: metabolic process1.54E-02
86GO:0051707: response to other organism1.63E-02
87GO:0009873: ethylene-activated signaling pathway1.80E-02
88GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.86E-02
89GO:0009846: pollen germination1.91E-02
90GO:0009734: auxin-activated signaling pathway1.97E-02
91GO:0051603: proteolysis involved in cellular protein catabolic process2.06E-02
92GO:0009738: abscisic acid-activated signaling pathway2.40E-02
93GO:0016569: covalent chromatin modification2.47E-02
94GO:0009611: response to wounding2.53E-02
95GO:0035556: intracellular signal transduction2.62E-02
96GO:0018105: peptidyl-serine phosphorylation2.64E-02
97GO:0007275: multicellular organism development2.66E-02
98GO:0000398: mRNA splicing, via spliceosome2.86E-02
99GO:0009790: embryo development3.38E-02
100GO:0006633: fatty acid biosynthetic process3.56E-02
101GO:0010150: leaf senescence3.81E-02
102GO:0006470: protein dephosphorylation4.19E-02
103GO:0007166: cell surface receptor signaling pathway4.19E-02
104GO:0006351: transcription, DNA-templated4.94E-02
105GO:0042742: defense response to bacterium4.98E-02
RankGO TermAdjusted P value
1GO:0004370: glycerol kinase activity0.00E+00
2GO:0042030: ATPase inhibitor activity0.00E+00
3GO:0005524: ATP binding6.43E-07
4GO:0004713: protein tyrosine kinase activity9.44E-07
5GO:0004674: protein serine/threonine kinase activity2.84E-05
6GO:0019200: carbohydrate kinase activity1.74E-04
7GO:0004450: isocitrate dehydrogenase (NADP+) activity1.74E-04
8GO:0004594: pantothenate kinase activity1.74E-04
9GO:0004781: sulfate adenylyltransferase (ATP) activity2.93E-04
10GO:0016805: dipeptidase activity2.93E-04
11GO:0004478: methionine adenosyltransferase activity2.93E-04
12GO:0004416: hydroxyacylglutathione hydrolase activity4.23E-04
13GO:0004301: epoxide hydrolase activity5.65E-04
14GO:0047769: arogenate dehydratase activity5.65E-04
15GO:0004664: prephenate dehydratase activity5.65E-04
16GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen7.14E-04
17GO:0031386: protein tag7.14E-04
18GO:0047714: galactolipase activity8.73E-04
19GO:0003730: mRNA 3'-UTR binding1.04E-03
20GO:0004144: diacylglycerol O-acyltransferase activity1.04E-03
21GO:0008113: peptide-methionine (S)-S-oxide reductase activity1.04E-03
22GO:0102391: decanoate--CoA ligase activity1.04E-03
23GO:0003950: NAD+ ADP-ribosyltransferase activity1.04E-03
24GO:0004467: long-chain fatty acid-CoA ligase activity1.21E-03
25GO:0004143: diacylglycerol kinase activity1.21E-03
26GO:0008235: metalloexopeptidase activity1.21E-03
27GO:0004712: protein serine/threonine/tyrosine kinase activity1.29E-03
28GO:0035064: methylated histone binding1.40E-03
29GO:0003951: NAD+ kinase activity1.59E-03
30GO:0008970: phosphatidylcholine 1-acylhydrolase activity1.59E-03
31GO:0004871: signal transducer activity1.83E-03
32GO:0004177: aminopeptidase activity2.46E-03
33GO:0008794: arsenate reductase (glutaredoxin) activity2.46E-03
34GO:0016301: kinase activity3.22E-03
35GO:0043130: ubiquitin binding3.98E-03
36GO:0004672: protein kinase activity4.32E-03
37GO:0004298: threonine-type endopeptidase activity4.54E-03
38GO:0008194: UDP-glycosyltransferase activity5.49E-03
39GO:0030246: carbohydrate binding6.75E-03
40GO:0016787: hydrolase activity7.65E-03
41GO:0004197: cysteine-type endopeptidase activity7.72E-03
42GO:0016597: amino acid binding9.16E-03
43GO:0051213: dioxygenase activity9.54E-03
44GO:0009931: calcium-dependent protein serine/threonine kinase activity1.03E-02
45GO:0004683: calmodulin-dependent protein kinase activity1.07E-02
46GO:0004806: triglyceride lipase activity1.07E-02
47GO:0030145: manganese ion binding1.27E-02
48GO:0009055: electron carrier activity1.50E-02
49GO:0004842: ubiquitin-protein transferase activity1.71E-02
50GO:0043621: protein self-association1.72E-02
51GO:0051287: NAD binding1.86E-02
52GO:0003729: mRNA binding1.88E-02
53GO:0016887: ATPase activity2.16E-02
54GO:0031625: ubiquitin protein ligase binding2.16E-02
55GO:0015035: protein disulfide oxidoreductase activity2.64E-02
56GO:0005515: protein binding2.84E-02
57GO:0008565: protein transporter activity3.44E-02
58GO:0042802: identical protein binding4.52E-02
RankGO TermAdjusted P value
1GO:0031972: chloroplast intermembrane space7.23E-05
2GO:0031461: cullin-RING ubiquitin ligase complex4.23E-04
3GO:0005776: autophagosome5.65E-04
4GO:0030529: intracellular ribonucleoprotein complex7.34E-04
5GO:0005829: cytosol7.89E-04
6GO:0005771: multivesicular body8.73E-04
7GO:0030127: COPII vesicle coat8.73E-04
8GO:0000815: ESCRT III complex1.04E-03
9GO:0016363: nuclear matrix1.04E-03
10GO:0000794: condensed nuclear chromosome1.21E-03
11GO:0005819: spindle1.29E-03
12GO:0048471: perinuclear region of cytoplasm2.46E-03
13GO:0005834: heterotrimeric G-protein complex2.54E-03
14GO:0009524: phragmoplast3.76E-03
15GO:0005839: proteasome core complex4.54E-03
16GO:0031410: cytoplasmic vesicle4.83E-03
17GO:0005770: late endosome6.38E-03
18GO:0000151: ubiquitin ligase complex1.15E-02
19GO:0005886: plasma membrane1.55E-02
20GO:0000502: proteasome complex2.01E-02
21GO:0005635: nuclear envelope2.11E-02
22GO:0010008: endosome membrane2.31E-02
23GO:0005737: cytoplasm3.71E-02
24GO:0009570: chloroplast stroma4.04E-02
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Gene type



Gene DE type