GO Enrichment Analysis of Co-expressed Genes with
AT1G61640
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006042: glucosamine biosynthetic process | 0.00E+00 |
| 2 | GO:1901137: carbohydrate derivative biosynthetic process | 0.00E+00 |
| 3 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 4 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 5 | GO:0034976: response to endoplasmic reticulum stress | 2.04E-11 |
| 6 | GO:0006457: protein folding | 3.03E-09 |
| 7 | GO:0045454: cell redox homeostasis | 7.68E-08 |
| 8 | GO:0018279: protein N-linked glycosylation via asparagine | 2.73E-06 |
| 9 | GO:0006605: protein targeting | 1.15E-05 |
| 10 | GO:0009651: response to salt stress | 2.10E-05 |
| 11 | GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine | 3.64E-05 |
| 12 | GO:0043687: post-translational protein modification | 3.64E-05 |
| 13 | GO:0051775: response to redox state | 3.64E-05 |
| 14 | GO:0000162: tryptophan biosynthetic process | 6.97E-05 |
| 15 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 9.09E-05 |
| 16 | GO:0015865: purine nucleotide transport | 9.09E-05 |
| 17 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 9.09E-05 |
| 18 | GO:0009306: protein secretion | 1.31E-04 |
| 19 | GO:0055074: calcium ion homeostasis | 1.58E-04 |
| 20 | GO:0046686: response to cadmium ion | 2.06E-04 |
| 21 | GO:0046902: regulation of mitochondrial membrane permeability | 2.33E-04 |
| 22 | GO:0072334: UDP-galactose transmembrane transport | 2.33E-04 |
| 23 | GO:0033014: tetrapyrrole biosynthetic process | 2.33E-04 |
| 24 | GO:0000460: maturation of 5.8S rRNA | 3.14E-04 |
| 25 | GO:0046283: anthocyanin-containing compound metabolic process | 4.01E-04 |
| 26 | GO:0006564: L-serine biosynthetic process | 4.01E-04 |
| 27 | GO:0009697: salicylic acid biosynthetic process | 4.01E-04 |
| 28 | GO:0010043: response to zinc ion | 4.64E-04 |
| 29 | GO:0000470: maturation of LSU-rRNA | 4.92E-04 |
| 30 | GO:0047484: regulation of response to osmotic stress | 4.92E-04 |
| 31 | GO:0010204: defense response signaling pathway, resistance gene-independent | 8.97E-04 |
| 32 | GO:0030968: endoplasmic reticulum unfolded protein response | 8.97E-04 |
| 33 | GO:0006783: heme biosynthetic process | 1.01E-03 |
| 34 | GO:0048316: seed development | 1.04E-03 |
| 35 | GO:0010205: photoinhibition | 1.12E-03 |
| 36 | GO:0043067: regulation of programmed cell death | 1.12E-03 |
| 37 | GO:0009735: response to cytokinin | 1.33E-03 |
| 38 | GO:0052544: defense response by callose deposition in cell wall | 1.36E-03 |
| 39 | GO:0010075: regulation of meristem growth | 1.62E-03 |
| 40 | GO:0006094: gluconeogenesis | 1.62E-03 |
| 41 | GO:0009934: regulation of meristem structural organization | 1.76E-03 |
| 42 | GO:0046688: response to copper ion | 1.89E-03 |
| 43 | GO:0006825: copper ion transport | 2.33E-03 |
| 44 | GO:0031348: negative regulation of defense response | 2.64E-03 |
| 45 | GO:0071456: cellular response to hypoxia | 2.64E-03 |
| 46 | GO:0030433: ubiquitin-dependent ERAD pathway | 2.64E-03 |
| 47 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 3.13E-03 |
| 48 | GO:0010501: RNA secondary structure unwinding | 3.30E-03 |
| 49 | GO:0000413: protein peptidyl-prolyl isomerization | 3.30E-03 |
| 50 | GO:0010197: polar nucleus fusion | 3.47E-03 |
| 51 | GO:0010154: fruit development | 3.47E-03 |
| 52 | GO:0006979: response to oxidative stress | 3.66E-03 |
| 53 | GO:0009851: auxin biosynthetic process | 3.82E-03 |
| 54 | GO:0006635: fatty acid beta-oxidation | 4.00E-03 |
| 55 | GO:0009630: gravitropism | 4.19E-03 |
| 56 | GO:1901657: glycosyl compound metabolic process | 4.37E-03 |
| 57 | GO:0006886: intracellular protein transport | 4.77E-03 |
| 58 | GO:0009751: response to salicylic acid | 5.61E-03 |
| 59 | GO:0009408: response to heat | 5.69E-03 |
| 60 | GO:0015995: chlorophyll biosynthetic process | 5.76E-03 |
| 61 | GO:0016051: carbohydrate biosynthetic process | 7.28E-03 |
| 62 | GO:0045087: innate immune response | 7.28E-03 |
| 63 | GO:0006099: tricarboxylic acid cycle | 7.51E-03 |
| 64 | GO:0042542: response to hydrogen peroxide | 8.44E-03 |
| 65 | GO:0009744: response to sucrose | 8.68E-03 |
| 66 | GO:0009644: response to high light intensity | 9.17E-03 |
| 67 | GO:0006855: drug transmembrane transport | 9.68E-03 |
| 68 | GO:0009555: pollen development | 1.01E-02 |
| 69 | GO:0009664: plant-type cell wall organization | 1.02E-02 |
| 70 | GO:0009846: pollen germination | 1.02E-02 |
| 71 | GO:0006486: protein glycosylation | 1.07E-02 |
| 72 | GO:0006096: glycolytic process | 1.20E-02 |
| 73 | GO:0009626: plant-type hypersensitive response | 1.26E-02 |
| 74 | GO:0009553: embryo sac development | 1.34E-02 |
| 75 | GO:0009624: response to nematode | 1.37E-02 |
| 76 | GO:0018105: peptidyl-serine phosphorylation | 1.40E-02 |
| 77 | GO:0009790: embryo development | 1.80E-02 |
| 78 | GO:0009414: response to water deprivation | 2.00E-02 |
| 79 | GO:0042742: defense response to bacterium | 2.05E-02 |
| 80 | GO:0009617: response to bacterium | 2.29E-02 |
| 81 | GO:0009826: unidimensional cell growth | 2.69E-02 |
| 82 | GO:0009409: response to cold | 2.78E-02 |
| 83 | GO:0080167: response to karrikin | 3.22E-02 |
| 84 | GO:0046777: protein autophosphorylation | 3.38E-02 |
| 85 | GO:0032259: methylation | 4.12E-02 |
| 86 | GO:0048364: root development | 4.38E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004360: glutamine-fructose-6-phosphate transaminase (isomerizing) activity | 0.00E+00 |
| 2 | GO:0004164: diphthine synthase activity | 0.00E+00 |
| 3 | GO:0050220: prostaglandin-E synthase activity | 0.00E+00 |
| 4 | GO:0003980: UDP-glucose:glycoprotein glucosyltransferase activity | 0.00E+00 |
| 5 | GO:0003756: protein disulfide isomerase activity | 1.82E-08 |
| 6 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 2.73E-06 |
| 7 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 3.64E-05 |
| 8 | GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity | 3.64E-05 |
| 9 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 3.64E-05 |
| 10 | GO:0033984: indole-3-glycerol-phosphate lyase activity | 3.64E-05 |
| 11 | GO:0097367: carbohydrate derivative binding | 3.64E-05 |
| 12 | GO:0004048: anthranilate phosphoribosyltransferase activity | 3.64E-05 |
| 13 | GO:0004325: ferrochelatase activity | 3.64E-05 |
| 14 | GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity | 3.64E-05 |
| 15 | GO:0043021: ribonucleoprotein complex binding | 9.09E-05 |
| 16 | GO:0016531: copper chaperone activity | 1.58E-04 |
| 17 | GO:0004148: dihydrolipoyl dehydrogenase activity | 1.58E-04 |
| 18 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 2.33E-04 |
| 19 | GO:0005460: UDP-glucose transmembrane transporter activity | 2.33E-04 |
| 20 | GO:0004834: tryptophan synthase activity | 3.14E-04 |
| 21 | GO:0004576: oligosaccharyl transferase activity | 3.14E-04 |
| 22 | GO:0005471: ATP:ADP antiporter activity | 4.01E-04 |
| 23 | GO:0005459: UDP-galactose transmembrane transporter activity | 4.01E-04 |
| 24 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 4.92E-04 |
| 25 | GO:0051082: unfolded protein binding | 1.20E-03 |
| 26 | GO:0004190: aspartic-type endopeptidase activity | 1.89E-03 |
| 27 | GO:0005507: copper ion binding | 2.32E-03 |
| 28 | GO:0004298: threonine-type endopeptidase activity | 2.48E-03 |
| 29 | GO:0008233: peptidase activity | 3.80E-03 |
| 30 | GO:0008483: transaminase activity | 4.75E-03 |
| 31 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 5.55E-03 |
| 32 | GO:0004683: calmodulin-dependent protein kinase activity | 5.76E-03 |
| 33 | GO:0102483: scopolin beta-glucosidase activity | 5.76E-03 |
| 34 | GO:0004004: ATP-dependent RNA helicase activity | 5.76E-03 |
| 35 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 6.18E-03 |
| 36 | GO:0015238: drug transmembrane transporter activity | 6.39E-03 |
| 37 | GO:0050897: cobalt ion binding | 6.83E-03 |
| 38 | GO:0003746: translation elongation factor activity | 7.28E-03 |
| 39 | GO:0008422: beta-glucosidase activity | 7.74E-03 |
| 40 | GO:0050661: NADP binding | 7.97E-03 |
| 41 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 9.68E-03 |
| 42 | GO:0051287: NAD binding | 9.93E-03 |
| 43 | GO:0000166: nucleotide binding | 1.01E-02 |
| 44 | GO:0015035: protein disulfide oxidoreductase activity | 1.40E-02 |
| 45 | GO:0016746: transferase activity, transferring acyl groups | 1.40E-02 |
| 46 | GO:0008026: ATP-dependent helicase activity | 1.43E-02 |
| 47 | GO:0004386: helicase activity | 1.46E-02 |
| 48 | GO:0016758: transferase activity, transferring hexosyl groups | 1.58E-02 |
| 49 | GO:0005509: calcium ion binding | 1.89E-02 |
| 50 | GO:0015297: antiporter activity | 1.96E-02 |
| 51 | GO:0008168: methyltransferase activity | 2.69E-02 |
| 52 | GO:0050660: flavin adenine dinucleotide binding | 3.06E-02 |
| 53 | GO:0009055: electron carrier activity | 4.46E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019034: viral replication complex | 0.00E+00 |
| 2 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
| 3 | GO:0005788: endoplasmic reticulum lumen | 3.43E-16 |
| 4 | GO:0005783: endoplasmic reticulum | 2.57E-13 |
| 5 | GO:0009507: chloroplast | 9.18E-09 |
| 6 | GO:0008250: oligosaccharyltransferase complex | 2.73E-06 |
| 7 | GO:0005774: vacuolar membrane | 2.31E-05 |
| 8 | GO:0005740: mitochondrial envelope | 2.82E-05 |
| 9 | GO:0045252: oxoglutarate dehydrogenase complex | 3.64E-05 |
| 10 | GO:0070545: PeBoW complex | 9.09E-05 |
| 11 | GO:0030660: Golgi-associated vesicle membrane | 3.14E-04 |
| 12 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 3.14E-04 |
| 13 | GO:0005773: vacuole | 4.29E-04 |
| 14 | GO:0030173: integral component of Golgi membrane | 5.88E-04 |
| 15 | GO:0016020: membrane | 6.37E-04 |
| 16 | GO:0030687: preribosome, large subunit precursor | 6.87E-04 |
| 17 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 7.90E-04 |
| 18 | GO:0009536: plastid | 8.40E-04 |
| 19 | GO:0000326: protein storage vacuole | 8.97E-04 |
| 20 | GO:0019773: proteasome core complex, alpha-subunit complex | 8.97E-04 |
| 21 | GO:0005834: heterotrimeric G-protein complex | 1.07E-03 |
| 22 | GO:0005765: lysosomal membrane | 1.36E-03 |
| 23 | GO:0005623: cell | 1.53E-03 |
| 24 | GO:0005759: mitochondrial matrix | 1.86E-03 |
| 25 | GO:0030176: integral component of endoplasmic reticulum membrane | 1.89E-03 |
| 26 | GO:0043234: protein complex | 2.04E-03 |
| 27 | GO:0005739: mitochondrion | 2.17E-03 |
| 28 | GO:0005758: mitochondrial intermembrane space | 2.18E-03 |
| 29 | GO:0005839: proteasome core complex | 2.48E-03 |
| 30 | GO:0009506: plasmodesma | 2.62E-03 |
| 31 | GO:0031969: chloroplast membrane | 3.87E-03 |
| 32 | GO:0016592: mediator complex | 4.19E-03 |
| 33 | GO:0048046: apoplast | 4.32E-03 |
| 34 | GO:0009505: plant-type cell wall | 4.82E-03 |
| 35 | GO:0005730: nucleolus | 7.06E-03 |
| 36 | GO:0009570: chloroplast stroma | 1.06E-02 |
| 37 | GO:0000502: proteasome complex | 1.07E-02 |
| 38 | GO:0005747: mitochondrial respiratory chain complex I | 1.23E-02 |
| 39 | GO:0005794: Golgi apparatus | 1.54E-02 |
| 40 | GO:0005654: nucleoplasm | 1.58E-02 |
| 41 | GO:0005622: intracellular | 1.80E-02 |
| 42 | GO:0009941: chloroplast envelope | 2.57E-02 |
| 43 | GO:0005886: plasma membrane | 2.59E-02 |
| 44 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.95E-02 |
| 45 | GO:0005789: endoplasmic reticulum membrane | 3.14E-02 |
| 46 | GO:0005743: mitochondrial inner membrane | 4.03E-02 |
| 47 | GO:0005829: cytosol | 4.57E-02 |