co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G55260

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0007638: mechanosensory behavior	0.00E+00
2	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
3	GO:0046322: negative regulation of fatty acid oxidation	0.00E+00
4	GO:0042493: response to drug	0.00E+00
5	GO:1905499: trichome papilla formation	0.00E+00
6	GO:0071555: cell wall organization	3.37E-10
7	GO:0010025: wax biosynthetic process	1.72E-07
8	GO:0010411: xyloglucan metabolic process	5.88E-06
9	GO:0042546: cell wall biogenesis	2.21E-05
10	GO:0042335: cuticle development	3.99E-05
11	GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway	1.20E-04
12	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	1.20E-04
13	GO:0042759: long-chain fatty acid biosynthetic process	1.20E-04
14	GO:0080051: cutin transport	1.20E-04
15	GO:0006869: lipid transport	1.26E-04
16	GO:0042761: very long-chain fatty acid biosynthetic process	1.41E-04
17	GO:0010198: synergid death	2.77E-04
18	GO:0015908: fatty acid transport	2.77E-04
19	GO:0006065: UDP-glucuronate biosynthetic process	4.58E-04
20	GO:0090506: axillary shoot meristem initiation	4.58E-04
21	GO:0046168: glycerol-3-phosphate catabolic process	4.58E-04
22	GO:1901562: response to paraquat	4.58E-04
23	GO:0030245: cellulose catabolic process	5.41E-04
24	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	5.89E-04
25	GO:0009413: response to flooding	6.57E-04
26	GO:0007231: osmosensory signaling pathway	6.57E-04
27	GO:0006072: glycerol-3-phosphate metabolic process	6.57E-04
28	GO:0051016: barbed-end actin filament capping	6.57E-04
29	GO:0009650: UV protection	6.57E-04
30	GO:0010306: rhamnogalacturonan II biosynthetic process	6.57E-04
31	GO:0050482: arachidonic acid secretion	6.57E-04
32	GO:0010222: stem vascular tissue pattern formation	8.72E-04
33	GO:0006183: GTP biosynthetic process	8.72E-04
34	GO:0033500: carbohydrate homeostasis	8.72E-04
35	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	8.72E-04
36	GO:0009956: radial pattern formation	8.72E-04
37	GO:0009755: hormone-mediated signaling pathway	8.72E-04
38	GO:0005975: carbohydrate metabolic process	8.78E-04
39	GO:0016042: lipid catabolic process	9.37E-04
40	GO:0010583: response to cyclopentenone	1.04E-03
41	GO:0006665: sphingolipid metabolic process	1.10E-03
42	GO:0010438: cellular response to sulfur starvation	1.10E-03
43	GO:0009828: plant-type cell wall loosening	1.17E-03
44	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.35E-03
45	GO:0006014: D-ribose metabolic process	1.35E-03
46	GO:0045490: pectin catabolic process	1.42E-03
47	GO:0010067: procambium histogenesis	1.61E-03
48	GO:0031930: mitochondria-nucleus signaling pathway	1.61E-03
49	GO:0009612: response to mechanical stimulus	1.61E-03
50	GO:0009737: response to abscisic acid	1.71E-03
51	GO:0009645: response to low light intensity stimulus	1.89E-03
52	GO:0006644: phospholipid metabolic process	2.19E-03
53	GO:0009819: drought recovery	2.19E-03
54	GO:0010439: regulation of glucosinolate biosynthetic process	2.19E-03
55	GO:2000070: regulation of response to water deprivation	2.19E-03
56	GO:0045010: actin nucleation	2.19E-03
57	GO:0016051: carbohydrate biosynthetic process	2.28E-03
58	GO:0009826: unidimensional cell growth	2.35E-03
59	GO:0009644: response to high light intensity	3.16E-03
60	GO:0006949: syncytium formation	3.51E-03
61	GO:0009664: plant-type cell wall organization	3.66E-03
62	GO:0042538: hyperosmotic salinity response	3.66E-03
63	GO:0010015: root morphogenesis	3.88E-03
64	GO:0006816: calcium ion transport	3.88E-03
65	GO:0009682: induced systemic resistance	3.88E-03
66	GO:0010105: negative regulation of ethylene-activated signaling pathway	4.26E-03
67	GO:0030036: actin cytoskeleton organization	4.64E-03
68	GO:0010588: cotyledon vascular tissue pattern formation	4.64E-03
69	GO:0009933: meristem structural organization	5.04E-03
70	GO:0010223: secondary shoot formation	5.04E-03
71	GO:0070588: calcium ion transmembrane transport	5.46E-03
72	GO:0051017: actin filament bundle assembly	6.32E-03
73	GO:0009414: response to water deprivation	6.54E-03
74	GO:0019953: sexual reproduction	6.76E-03
75	GO:0007017: microtubule-based process	6.76E-03
76	GO:0010431: seed maturation	7.22E-03
77	GO:0016998: cell wall macromolecule catabolic process	7.22E-03
78	GO:0031348: negative regulation of defense response	7.69E-03
79	GO:0009625: response to insect	8.18E-03
80	GO:0009294: DNA mediated transformation	8.18E-03
81	GO:0009411: response to UV	8.18E-03
82	GO:0001944: vasculature development	8.18E-03
83	GO:0010089: xylem development	8.66E-03
84	GO:0019722: calcium-mediated signaling	8.66E-03
85	GO:0010091: trichome branching	8.66E-03
86	GO:0006633: fatty acid biosynthetic process	8.77E-03
87	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	9.17E-03
88	GO:0010087: phloem or xylem histogenesis	9.68E-03
89	GO:0080022: primary root development	9.68E-03
90	GO:0048868: pollen tube development	1.02E-02
91	GO:0010305: leaf vascular tissue pattern formation	1.02E-02
92	GO:0009739: response to gibberellin	1.08E-02
93	GO:0007166: cell surface receptor signaling pathway	1.10E-02
94	GO:0009611: response to wounding	1.13E-02
95	GO:0019252: starch biosynthetic process	1.13E-02
96	GO:0009617: response to bacterium	1.15E-02
97	GO:0016125: sterol metabolic process	1.36E-02
98	GO:0007267: cell-cell signaling	1.41E-02
99	GO:0051607: defense response to virus	1.47E-02
100	GO:0016126: sterol biosynthetic process	1.54E-02
101	GO:0009860: pollen tube growth	1.61E-02
102	GO:0042128: nitrate assimilation	1.66E-02
103	GO:0009817: defense response to fungus, incompatible interaction	1.85E-02
104	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.92E-02
105	GO:0009813: flavonoid biosynthetic process	1.92E-02
106	GO:0009407: toxin catabolic process	1.99E-02
107	GO:0007568: aging	2.05E-02
108	GO:0007165: signal transduction	2.05E-02
109	GO:0009867: jasmonic acid mediated signaling pathway	2.19E-02
110	GO:0045087: innate immune response	2.19E-02
111	GO:0006631: fatty acid metabolic process	2.48E-02
112	GO:0010114: response to red light	2.63E-02
113	GO:0006629: lipid metabolic process	2.74E-02
114	GO:0009408: response to heat	2.74E-02
115	GO:0009636: response to toxic substance	2.85E-02
116	GO:0009753: response to jasmonic acid	2.94E-02
117	GO:0009809: lignin biosynthetic process	3.25E-02
118	GO:0006857: oligopeptide transport	3.41E-02
119	GO:0043086: negative regulation of catalytic activity	3.66E-02
120	GO:0048367: shoot system development	3.74E-02
121	GO:0042545: cell wall modification	4.09E-02
122	GO:0009738: abscisic acid-activated signaling pathway	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
2	GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity	0.00E+00
3	GO:0004496: mevalonate kinase activity	0.00E+00
4	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
5	GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity	0.00E+00
6	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.80E-06
7	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.89E-06
8	GO:0016798: hydrolase activity, acting on glycosyl bonds	5.88E-06
9	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	6.48E-06
10	GO:0051753: mannan synthase activity	4.28E-05
11	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	1.17E-04
12	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	1.20E-04
13	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	1.20E-04
14	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	1.20E-04
15	GO:0015245: fatty acid transporter activity	1.20E-04
16	GO:0003938: IMP dehydrogenase activity	2.77E-04
17	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	2.77E-04
18	GO:0004857: enzyme inhibitor activity	4.09E-04
19	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	4.58E-04
20	GO:0003979: UDP-glucose 6-dehydrogenase activity	4.58E-04
21	GO:0005504: fatty acid binding	4.58E-04
22	GO:0030570: pectate lyase activity	5.89E-04
23	GO:0008810: cellulase activity	5.89E-04
24	GO:0052689: carboxylic ester hydrolase activity	6.33E-04
25	GO:0001872: (1->3)-beta-D-glucan binding	6.57E-04
26	GO:0052793: pectin acetylesterase activity	8.72E-04
27	GO:0045430: chalcone isomerase activity	8.72E-04
28	GO:0009922: fatty acid elongase activity	1.10E-03
29	GO:0004623: phospholipase A2 activity	1.10E-03
30	GO:0051015: actin filament binding	1.11E-03
31	GO:0004629: phospholipase C activity	1.35E-03
32	GO:0008289: lipid binding	1.60E-03
33	GO:0004747: ribokinase activity	1.61E-03
34	GO:0004435: phosphatidylinositol phospholipase C activity	1.61E-03
35	GO:0043295: glutathione binding	1.89E-03
36	GO:0008865: fructokinase activity	2.19E-03
37	GO:0052747: sinapyl alcohol dehydrogenase activity	2.19E-03
38	GO:0015020: glucuronosyltransferase activity	3.51E-03
39	GO:0051287: NAD binding	3.53E-03
40	GO:0045551: cinnamyl-alcohol dehydrogenase activity	4.26E-03
41	GO:0004871: signal transducer activity	4.30E-03
42	GO:0005262: calcium channel activity	4.64E-03
43	GO:0004565: beta-galactosidase activity	4.64E-03
44	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.79E-03
45	GO:0030599: pectinesterase activity	5.26E-03
46	GO:0005528: FK506 binding	6.32E-03
47	GO:0033612: receptor serine/threonine kinase binding	7.22E-03
48	GO:0016829: lyase activity	7.55E-03
49	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	8.98E-03
50	GO:0005102: receptor binding	9.17E-03
51	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.23E-02
52	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.41E-02
53	GO:0005200: structural constituent of cytoskeleton	1.41E-02
54	GO:0008375: acetylglucosaminyltransferase activity	1.66E-02
55	GO:0030247: polysaccharide binding	1.72E-02
56	GO:0004364: glutathione transferase activity	2.55E-02
57	GO:0015293: symporter activity	2.85E-02
58	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.93E-02
59	GO:0016298: lipase activity	3.33E-02
60	GO:0045330: aspartyl esterase activity	3.49E-02
61	GO:0045735: nutrient reservoir activity	3.66E-02
62	GO:0004650: polygalacturonase activity	3.91E-02
63	GO:0022857: transmembrane transporter activity	4.00E-02
64	GO:0003779: actin binding	4.09E-02
65	GO:0016757: transferase activity, transferring glycosyl groups	4.19E-02
66	GO:0016746: transferase activity, transferring acyl groups	4.26E-02

Rank	GO Term	Adjusted P value
1	GO:0046658: anchored component of plasma membrane	3.30E-09
2	GO:0005618: cell wall	7.90E-09
3	GO:0031225: anchored component of membrane	2.09E-08
4	GO:0005576: extracellular region	2.54E-08
5	GO:0048046: apoplast	4.52E-08
6	GO:0005886: plasma membrane	1.10E-07
7	GO:0009505: plant-type cell wall	1.93E-05
8	GO:0009923: fatty acid elongase complex	1.20E-04
9	GO:0009897: external side of plasma membrane	4.58E-04
10	GO:0009331: glycerol-3-phosphate dehydrogenase complex	6.57E-04
11	GO:0031977: thylakoid lumen	2.70E-03
12	GO:0045298: tubulin complex	2.82E-03
13	GO:0005875: microtubule associated complex	5.88E-03
14	GO:0009543: chloroplast thylakoid lumen	6.98E-03
15	GO:0031410: cytoplasmic vesicle	7.69E-03
16	GO:0015629: actin cytoskeleton	8.18E-03
17	GO:0009506: plasmodesma	9.42E-03
18	GO:0016020: membrane	1.26E-02
19	GO:0000151: ubiquitin ligase complex	1.85E-02
20	GO:0005794: Golgi apparatus	1.89E-02
21	GO:0005856: cytoskeleton	2.85E-02
22	GO:0005834: heterotrimeric G-protein complex	3.83E-02
23	GO:0000139: Golgi membrane	3.89E-02
24	GO:0009570: chloroplast stroma	4.16E-02