Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G55210

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0080053: response to phenylalanine0.00E+00
2GO:0002376: immune system process0.00E+00
3GO:0046865: terpenoid transport0.00E+00
4GO:0051938: L-glutamate import0.00E+00
5GO:0043201: response to leucine0.00E+00
6GO:0080052: response to histidine0.00E+00
7GO:0006099: tricarboxylic acid cycle8.07E-13
8GO:0006102: isocitrate metabolic process1.96E-08
9GO:0046686: response to cadmium ion1.75E-07
10GO:0006097: glyoxylate cycle3.06E-07
11GO:0006101: citrate metabolic process1.77E-06
12GO:0043091: L-arginine import1.77E-06
13GO:0034976: response to endoplasmic reticulum stress3.55E-05
14GO:0003333: amino acid transmembrane transport5.73E-05
15GO:0045454: cell redox homeostasis5.79E-05
16GO:0006979: response to oxidative stress8.37E-05
17GO:0003400: regulation of COPII vesicle coating1.93E-04
18GO:1901183: positive regulation of camalexin biosynthetic process1.93E-04
19GO:0019673: GDP-mannose metabolic process1.93E-04
20GO:0046244: salicylic acid catabolic process1.93E-04
21GO:0080093: regulation of photorespiration1.93E-04
22GO:0031998: regulation of fatty acid beta-oxidation1.93E-04
23GO:0034975: protein folding in endoplasmic reticulum1.93E-04
24GO:0015760: glucose-6-phosphate transport1.93E-04
25GO:1990641: response to iron ion starvation1.93E-04
26GO:0099132: ATP hydrolysis coupled cation transmembrane transport1.93E-04
27GO:0033306: phytol metabolic process1.93E-04
28GO:0006007: glucose catabolic process1.93E-04
29GO:0015712: hexose phosphate transport4.33E-04
30GO:0042939: tripeptide transport4.33E-04
31GO:0015802: basic amino acid transport4.33E-04
32GO:0009866: induced systemic resistance, ethylene mediated signaling pathway4.33E-04
33GO:0010043: response to zinc ion4.74E-04
34GO:0009751: response to salicylic acid5.52E-04
35GO:0080168: abscisic acid transport7.06E-04
36GO:0042351: 'de novo' GDP-L-fucose biosynthetic process7.06E-04
37GO:0035436: triose phosphate transmembrane transport7.06E-04
38GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway7.06E-04
39GO:0015692: lead ion transport7.06E-04
40GO:0015714: phosphoenolpyruvate transport7.06E-04
41GO:0006855: drug transmembrane transport8.88E-04
42GO:0010116: positive regulation of abscisic acid biosynthetic process1.01E-03
43GO:0002239: response to oomycetes1.01E-03
44GO:0006096: glycolytic process1.30E-03
45GO:0015713: phosphoglycerate transport1.34E-03
46GO:0034440: lipid oxidation1.34E-03
47GO:0042938: dipeptide transport1.34E-03
48GO:0010109: regulation of photosynthesis1.34E-03
49GO:1902584: positive regulation of response to water deprivation1.34E-03
50GO:0010118: stomatal movement1.40E-03
51GO:0042742: defense response to bacterium1.45E-03
52GO:0009624: response to nematode1.65E-03
53GO:0009697: salicylic acid biosynthetic process1.70E-03
54GO:0006564: L-serine biosynthetic process1.70E-03
55GO:0007029: endoplasmic reticulum organization1.70E-03
56GO:0006465: signal peptide processing1.70E-03
57GO:0045927: positive regulation of growth1.70E-03
58GO:0000304: response to singlet oxygen1.70E-03
59GO:0019252: starch biosynthetic process1.73E-03
60GO:0002229: defense response to oomycetes1.85E-03
61GO:0010193: response to ozone1.85E-03
62GO:0007035: vacuolar acidification2.10E-03
63GO:0006796: phosphate-containing compound metabolic process2.10E-03
64GO:0009643: photosynthetic acclimation2.10E-03
65GO:0006014: D-ribose metabolic process2.10E-03
66GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly2.10E-03
67GO:0006121: mitochondrial electron transport, succinate to ubiquinone2.10E-03
68GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation2.10E-03
69GO:0006952: defense response2.24E-03
70GO:0010252: auxin homeostasis2.24E-03
71GO:0006457: protein folding2.43E-03
72GO:0006120: mitochondrial electron transport, NADH to ubiquinone2.52E-03
73GO:0080086: stamen filament development2.52E-03
74GO:0034389: lipid particle organization2.52E-03
75GO:0042773: ATP synthesis coupled electron transport2.96E-03
76GO:1902074: response to salt2.96E-03
77GO:0080186: developmental vegetative growth2.96E-03
78GO:0019745: pentacyclic triterpenoid biosynthetic process2.96E-03
79GO:0030091: protein repair3.43E-03
80GO:0006875: cellular metal ion homeostasis3.43E-03
81GO:0005978: glycogen biosynthetic process3.43E-03
82GO:0009817: defense response to fungus, incompatible interaction3.47E-03
83GO:0009407: toxin catabolic process3.83E-03
84GO:0010120: camalexin biosynthetic process3.93E-03
85GO:0030968: endoplasmic reticulum unfolded protein response3.93E-03
86GO:0009853: photorespiration4.40E-03
87GO:0046685: response to arsenic-containing substance4.44E-03
88GO:0019432: triglyceride biosynthetic process4.44E-03
89GO:0043067: regulation of programmed cell death4.99E-03
90GO:0030042: actin filament depolymerization4.99E-03
91GO:0007064: mitotic sister chromatid cohesion5.55E-03
92GO:0009688: abscisic acid biosynthetic process5.55E-03
93GO:0009555: pollen development6.43E-03
94GO:0009737: response to abscisic acid6.46E-03
95GO:0006790: sulfur compound metabolic process6.73E-03
96GO:0006108: malate metabolic process7.36E-03
97GO:0090351: seedling development8.67E-03
98GO:0070588: calcium ion transmembrane transport8.67E-03
99GO:0046854: phosphatidylinositol phosphorylation8.67E-03
100GO:0009901: anther dehiscence8.67E-03
101GO:0006071: glycerol metabolic process9.35E-03
102GO:0009620: response to fungus9.93E-03
103GO:0006487: protein N-linked glycosylation1.01E-02
104GO:0009695: jasmonic acid biosynthetic process1.08E-02
105GO:0031408: oxylipin biosynthetic process1.15E-02
106GO:0016998: cell wall macromolecule catabolic process1.15E-02
107GO:0030433: ubiquitin-dependent ERAD pathway1.23E-02
108GO:0031348: negative regulation of defense response1.23E-02
109GO:0019748: secondary metabolic process1.23E-02
110GO:0040007: growth1.31E-02
111GO:0009306: protein secretion1.39E-02
112GO:0048653: anther development1.55E-02
113GO:0009651: response to salt stress1.56E-02
114GO:0048868: pollen tube development1.63E-02
115GO:0009749: response to glucose1.81E-02
116GO:0009851: auxin biosynthetic process1.81E-02
117GO:0006464: cellular protein modification process2.18E-02
118GO:0009567: double fertilization forming a zygote and endosperm2.18E-02
119GO:0009617: response to bacterium2.25E-02
120GO:0009615: response to virus2.47E-02
121GO:0009607: response to biotic stimulus2.57E-02
122GO:0009611: response to wounding2.62E-02
123GO:0009627: systemic acquired resistance2.67E-02
124GO:0006888: ER to Golgi vesicle-mediated transport2.77E-02
125GO:0016311: dephosphorylation2.88E-02
126GO:0008219: cell death2.98E-02
127GO:0006468: protein phosphorylation3.16E-02
128GO:0006499: N-terminal protein myristoylation3.20E-02
129GO:0006865: amino acid transport3.42E-02
130GO:0045087: innate immune response3.53E-02
131GO:0055114: oxidation-reduction process3.72E-02
132GO:0006511: ubiquitin-dependent protein catabolic process3.73E-02
133GO:0006839: mitochondrial transport3.87E-02
134GO:0009744: response to sucrose4.23E-02
135GO:0042546: cell wall biogenesis4.35E-02
136GO:0009636: response to toxic substance4.59E-02
137GO:0009846: pollen germination4.96E-02
138GO:0042538: hyperosmotic salinity response4.96E-02
RankGO TermAdjusted P value
1GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
2GO:0050220: prostaglandin-E synthase activity0.00E+00
3GO:0003994: aconitate hydratase activity1.77E-06
4GO:0003756: protein disulfide isomerase activity2.82E-06
5GO:0004449: isocitrate dehydrogenase (NAD+) activity1.50E-05
6GO:0015189: L-lysine transmembrane transporter activity1.50E-05
7GO:0015181: arginine transmembrane transporter activity1.50E-05
8GO:0010279: indole-3-acetic acid amido synthetase activity2.77E-05
9GO:0005313: L-glutamate transmembrane transporter activity2.77E-05
10GO:0051539: 4 iron, 4 sulfur cluster binding5.85E-05
11GO:0005090: Sar guanyl-nucleotide exchange factor activity1.93E-04
12GO:0030611: arsenate reductase activity1.93E-04
13GO:0004112: cyclic-nucleotide phosphodiesterase activity1.93E-04
14GO:0008446: GDP-mannose 4,6-dehydratase activity1.93E-04
15GO:0015174: basic amino acid transmembrane transporter activity2.82E-04
16GO:0004129: cytochrome-c oxidase activity3.85E-04
17GO:0019172: glyoxalase III activity4.33E-04
18GO:0015036: disulfide oxidoreductase activity4.33E-04
19GO:0042937: tripeptide transporter activity4.33E-04
20GO:0008517: folic acid transporter activity4.33E-04
21GO:0004776: succinate-CoA ligase (GDP-forming) activity4.33E-04
22GO:0004617: phosphoglycerate dehydrogenase activity4.33E-04
23GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity4.33E-04
24GO:0015152: glucose-6-phosphate transmembrane transporter activity4.33E-04
25GO:0004775: succinate-CoA ligase (ADP-forming) activity4.33E-04
26GO:0009055: electron carrier activity6.41E-04
27GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity7.06E-04
28GO:0016165: linoleate 13S-lipoxygenase activity7.06E-04
29GO:0071917: triose-phosphate transmembrane transporter activity7.06E-04
30GO:0005507: copper ion binding7.29E-04
31GO:0051536: iron-sulfur cluster binding7.77E-04
32GO:0004298: threonine-type endopeptidase activity9.35E-04
33GO:0042299: lupeol synthase activity1.01E-03
34GO:0004108: citrate (Si)-synthase activity1.01E-03
35GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity1.01E-03
36GO:0000287: magnesium ion binding1.05E-03
37GO:0015171: amino acid transmembrane transporter activity1.20E-03
38GO:0016866: intramolecular transferase activity1.34E-03
39GO:0004031: aldehyde oxidase activity1.34E-03
40GO:0050302: indole-3-acetaldehyde oxidase activity1.34E-03
41GO:0008878: glucose-1-phosphate adenylyltransferase activity1.34E-03
42GO:0015120: phosphoglycerate transmembrane transporter activity1.34E-03
43GO:0004737: pyruvate decarboxylase activity1.34E-03
44GO:0042936: dipeptide transporter activity1.34E-03
45GO:0005524: ATP binding1.36E-03
46GO:0008233: peptidase activity1.45E-03
47GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity1.70E-03
48GO:0000104: succinate dehydrogenase activity1.70E-03
49GO:0005496: steroid binding1.70E-03
50GO:0015301: anion:anion antiporter activity1.70E-03
51GO:0005452: inorganic anion exchanger activity1.70E-03
52GO:0015035: protein disulfide oxidoreductase activity1.71E-03
53GO:0008137: NADH dehydrogenase (ubiquinone) activity1.85E-03
54GO:0016462: pyrophosphatase activity2.10E-03
55GO:0036402: proteasome-activating ATPase activity2.10E-03
56GO:0016615: malate dehydrogenase activity2.10E-03
57GO:0030976: thiamine pyrophosphate binding2.10E-03
58GO:0030060: L-malate dehydrogenase activity2.52E-03
59GO:0004602: glutathione peroxidase activity2.52E-03
60GO:0004144: diacylglycerol O-acyltransferase activity2.52E-03
61GO:0008113: peptide-methionine (S)-S-oxide reductase activity2.52E-03
62GO:0051020: GTPase binding2.52E-03
63GO:0051920: peroxiredoxin activity2.52E-03
64GO:0033743: peptide-methionine (R)-S-oxide reductase activity2.52E-03
65GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.52E-03
66GO:0004747: ribokinase activity2.52E-03
67GO:0043295: glutathione binding2.96E-03
68GO:0016831: carboxy-lyase activity2.96E-03
69GO:0004427: inorganic diphosphatase activity2.96E-03
70GO:0008865: fructokinase activity3.43E-03
71GO:0016209: antioxidant activity3.43E-03
72GO:0008889: glycerophosphodiester phosphodiesterase activity4.44E-03
73GO:0042626: ATPase activity, coupled to transmembrane movement of substances4.46E-03
74GO:0005509: calcium ion binding4.62E-03
75GO:0030955: potassium ion binding4.99E-03
76GO:0004743: pyruvate kinase activity4.99E-03
77GO:0004364: glutathione transferase activity5.44E-03
78GO:0008171: O-methyltransferase activity5.55E-03
79GO:0051537: 2 iron, 2 sulfur cluster binding6.12E-03
80GO:0008794: arsenate reductase (glutaredoxin) activity6.13E-03
81GO:0046961: proton-transporting ATPase activity, rotational mechanism6.13E-03
82GO:0008559: xenobiotic-transporting ATPase activity6.13E-03
83GO:0051287: NAD binding6.85E-03
84GO:0005315: inorganic phosphate transmembrane transporter activity7.36E-03
85GO:0015114: phosphate ion transmembrane transporter activity7.36E-03
86GO:0005388: calcium-transporting ATPase activity7.36E-03
87GO:0017025: TBP-class protein binding8.67E-03
88GO:0004190: aspartic-type endopeptidase activity8.67E-03
89GO:0004725: protein tyrosine phosphatase activity9.35E-03
90GO:0003954: NADH dehydrogenase activity1.01E-02
91GO:0051082: unfolded protein binding1.09E-02
92GO:0016853: isomerase activity1.72E-02
93GO:0015297: antiporter activity1.80E-02
94GO:0048038: quinone binding1.90E-02
95GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.08E-02
96GO:0016887: ATPase activity2.15E-02
97GO:0008483: transaminase activity2.27E-02
98GO:0016597: amino acid binding2.37E-02
99GO:0051213: dioxygenase activity2.47E-02
100GO:0030247: polysaccharide binding2.77E-02
101GO:0008757: S-adenosylmethionine-dependent methyltransferase activity2.88E-02
102GO:0005096: GTPase activator activity3.09E-02
103GO:0015238: drug transmembrane transporter activity3.09E-02
104GO:0004674: protein serine/threonine kinase activity3.20E-02
105GO:0030145: manganese ion binding3.31E-02
106GO:0016614: oxidoreductase activity, acting on CH-OH group of donors3.31E-02
107GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.53E-02
RankGO TermAdjusted P value
1GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
2GO:0005783: endoplasmic reticulum6.99E-08
3GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)2.63E-06
4GO:0045273: respiratory chain complex II1.56E-04
5GO:0005886: plasma membrane1.82E-04
6GO:0005787: signal peptidase complex1.93E-04
7GO:0005829: cytosol2.70E-04
8GO:0005788: endoplasmic reticulum lumen2.97E-04
9GO:0031314: extrinsic component of mitochondrial inner membrane4.33E-04
10GO:0045254: pyruvate dehydrogenase complex4.33E-04
11GO:0005774: vacuolar membrane6.66E-04
12GO:0005751: mitochondrial respiratory chain complex IV7.06E-04
13GO:0005773: vacuole7.14E-04
14GO:0045271: respiratory chain complex I8.55E-04
15GO:0005839: proteasome core complex9.35E-04
16GO:0000502: proteasome complex1.06E-03
17GO:0005739: mitochondrion1.12E-03
18GO:0016021: integral component of membrane1.19E-03
19GO:0030660: Golgi-associated vesicle membrane1.34E-03
20GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane1.34E-03
21GO:0005747: mitochondrial respiratory chain complex I1.36E-03
22GO:0008250: oligosaccharyltransferase complex1.70E-03
23GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain1.70E-03
24GO:0005746: mitochondrial respiratory chain1.70E-03
25GO:0032588: trans-Golgi network membrane2.10E-03
26GO:0009507: chloroplast2.12E-03
27GO:0031597: cytosolic proteasome complex2.52E-03
28GO:0005759: mitochondrial matrix2.92E-03
29GO:0031595: nuclear proteasome complex2.96E-03
30GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane3.43E-03
31GO:0005811: lipid particle3.93E-03
32GO:0000326: protein storage vacuole3.93E-03
33GO:0019773: proteasome core complex, alpha-subunit complex3.93E-03
34GO:0031901: early endosome membrane4.44E-03
35GO:0031090: organelle membrane4.44E-03
36GO:0008540: proteasome regulatory particle, base subcomplex4.99E-03
37GO:0005765: lysosomal membrane6.13E-03
38GO:0031966: mitochondrial membrane7.11E-03
39GO:0031969: chloroplast membrane7.54E-03
40GO:0030176: integral component of endoplasmic reticulum membrane8.67E-03
41GO:0005789: endoplasmic reticulum membrane1.11E-02
42GO:0015629: actin cytoskeleton1.31E-02
43GO:0009506: plasmodesma1.98E-02
44GO:0005618: cell wall2.14E-02
45GO:0005778: peroxisomal membrane2.27E-02
46GO:0016020: membrane2.57E-02
47GO:0000325: plant-type vacuole3.31E-02
48GO:0005743: mitochondrial inner membrane4.94E-02
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Gene type



Gene DE type