GO Enrichment Analysis of Co-expressed Genes with
AT1G53310
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006069: ethanol oxidation | 0.00E+00 |
| 2 | GO:0031990: mRNA export from nucleus in response to heat stress | 0.00E+00 |
| 3 | GO:0046292: formaldehyde metabolic process | 0.00E+00 |
| 4 | GO:0090351: seedling development | 2.25E-06 |
| 5 | GO:0006102: isocitrate metabolic process | 2.73E-05 |
| 6 | GO:0006499: N-terminal protein myristoylation | 5.18E-05 |
| 7 | GO:0006772: thiamine metabolic process | 6.26E-05 |
| 8 | GO:0035266: meristem growth | 6.26E-05 |
| 9 | GO:0007292: female gamete generation | 6.26E-05 |
| 10 | GO:0034402: recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex | 6.26E-05 |
| 11 | GO:0006101: citrate metabolic process | 1.52E-04 |
| 12 | GO:0007154: cell communication | 1.52E-04 |
| 13 | GO:0006597: spermine biosynthetic process | 1.52E-04 |
| 14 | GO:0051788: response to misfolded protein | 1.52E-04 |
| 15 | GO:0045948: positive regulation of translational initiation | 1.52E-04 |
| 16 | GO:0045454: cell redox homeostasis | 1.79E-04 |
| 17 | GO:0071494: cellular response to UV-C | 2.57E-04 |
| 18 | GO:0060968: regulation of gene silencing | 2.57E-04 |
| 19 | GO:0000288: nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | 2.57E-04 |
| 20 | GO:0010498: proteasomal protein catabolic process | 2.57E-04 |
| 21 | GO:0006662: glycerol ether metabolic process | 3.47E-04 |
| 22 | GO:0080024: indolebutyric acid metabolic process | 3.73E-04 |
| 23 | GO:0001676: long-chain fatty acid metabolic process | 3.73E-04 |
| 24 | GO:0072334: UDP-galactose transmembrane transport | 3.73E-04 |
| 25 | GO:0010222: stem vascular tissue pattern formation | 4.99E-04 |
| 26 | GO:1902584: positive regulation of response to water deprivation | 4.99E-04 |
| 27 | GO:0015867: ATP transport | 4.99E-04 |
| 28 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 5.56E-04 |
| 29 | GO:0006090: pyruvate metabolic process | 6.32E-04 |
| 30 | GO:0006564: L-serine biosynthetic process | 6.32E-04 |
| 31 | GO:0006097: glyoxylate cycle | 6.32E-04 |
| 32 | GO:0009229: thiamine diphosphate biosynthetic process | 6.32E-04 |
| 33 | GO:0045927: positive regulation of growth | 6.32E-04 |
| 34 | GO:0006596: polyamine biosynthetic process | 7.73E-04 |
| 35 | GO:0006014: D-ribose metabolic process | 7.73E-04 |
| 36 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 7.73E-04 |
| 37 | GO:0015866: ADP transport | 7.73E-04 |
| 38 | GO:0048827: phyllome development | 7.73E-04 |
| 39 | GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation | 7.73E-04 |
| 40 | GO:0048232: male gamete generation | 7.73E-04 |
| 41 | GO:0043248: proteasome assembly | 7.73E-04 |
| 42 | GO:0009267: cellular response to starvation | 7.73E-04 |
| 43 | GO:0010043: response to zinc ion | 9.06E-04 |
| 44 | GO:0006694: steroid biosynthetic process | 9.20E-04 |
| 45 | GO:0098655: cation transmembrane transport | 9.20E-04 |
| 46 | GO:0034389: lipid particle organization | 9.20E-04 |
| 47 | GO:0006511: ubiquitin-dependent protein catabolic process | 9.87E-04 |
| 48 | GO:0034599: cellular response to oxidative stress | 1.03E-03 |
| 49 | GO:0006099: tricarboxylic acid cycle | 1.03E-03 |
| 50 | GO:0043090: amino acid import | 1.07E-03 |
| 51 | GO:0080186: developmental vegetative growth | 1.07E-03 |
| 52 | GO:0010078: maintenance of root meristem identity | 1.24E-03 |
| 53 | GO:0006367: transcription initiation from RNA polymerase II promoter | 1.41E-03 |
| 54 | GO:0071577: zinc II ion transmembrane transport | 1.77E-03 |
| 55 | GO:0000103: sulfate assimilation | 1.96E-03 |
| 56 | GO:0048829: root cap development | 1.96E-03 |
| 57 | GO:0010015: root morphogenesis | 2.17E-03 |
| 58 | GO:0016569: covalent chromatin modification | 2.24E-03 |
| 59 | GO:0006108: malate metabolic process | 2.58E-03 |
| 60 | GO:0055046: microgametogenesis | 2.58E-03 |
| 61 | GO:0009933: meristem structural organization | 2.80E-03 |
| 62 | GO:0007030: Golgi organization | 3.03E-03 |
| 63 | GO:0006071: glycerol metabolic process | 3.26E-03 |
| 64 | GO:0006289: nucleotide-excision repair | 3.49E-03 |
| 65 | GO:0006487: protein N-linked glycosylation | 3.49E-03 |
| 66 | GO:0046686: response to cadmium ion | 3.52E-03 |
| 67 | GO:0006366: transcription from RNA polymerase II promoter | 3.98E-03 |
| 68 | GO:0030433: ubiquitin-dependent ERAD pathway | 4.24E-03 |
| 69 | GO:0009306: protein secretion | 4.76E-03 |
| 70 | GO:0009561: megagametogenesis | 4.76E-03 |
| 71 | GO:0034220: ion transmembrane transport | 5.31E-03 |
| 72 | GO:0019252: starch biosynthetic process | 6.17E-03 |
| 73 | GO:0006635: fatty acid beta-oxidation | 6.46E-03 |
| 74 | GO:0010193: response to ozone | 6.46E-03 |
| 75 | GO:0031047: gene silencing by RNA | 6.76E-03 |
| 76 | GO:0007264: small GTPase mediated signal transduction | 6.76E-03 |
| 77 | GO:0010286: heat acclimation | 7.70E-03 |
| 78 | GO:0080167: response to karrikin | 7.77E-03 |
| 79 | GO:0055114: oxidation-reduction process | 8.27E-03 |
| 80 | GO:0042742: defense response to bacterium | 8.89E-03 |
| 81 | GO:0006979: response to oxidative stress | 8.97E-03 |
| 82 | GO:0006974: cellular response to DNA damage stimulus | 9.01E-03 |
| 83 | GO:0008219: cell death | 1.01E-02 |
| 84 | GO:0010311: lateral root formation | 1.04E-02 |
| 85 | GO:0009407: toxin catabolic process | 1.08E-02 |
| 86 | GO:0007568: aging | 1.11E-02 |
| 87 | GO:0006865: amino acid transport | 1.15E-02 |
| 88 | GO:0045087: innate immune response | 1.19E-02 |
| 89 | GO:0006839: mitochondrial transport | 1.30E-02 |
| 90 | GO:0009409: response to cold | 1.31E-02 |
| 91 | GO:0006631: fatty acid metabolic process | 1.34E-02 |
| 92 | GO:0000209: protein polyubiquitination | 1.46E-02 |
| 93 | GO:0009965: leaf morphogenesis | 1.54E-02 |
| 94 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 1.63E-02 |
| 95 | GO:0006812: cation transport | 1.67E-02 |
| 96 | GO:0042538: hyperosmotic salinity response | 1.67E-02 |
| 97 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.80E-02 |
| 98 | GO:0006096: glycolytic process | 1.98E-02 |
| 99 | GO:0048367: shoot system development | 2.02E-02 |
| 100 | GO:0048316: seed development | 2.02E-02 |
| 101 | GO:0051726: regulation of cell cycle | 2.35E-02 |
| 102 | GO:0006470: protein dephosphorylation | 3.66E-02 |
| 103 | GO:0009826: unidimensional cell growth | 4.42E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080007: S-nitrosoglutathione reductase activity | 0.00E+00 |
| 2 | GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity | 0.00E+00 |
| 3 | GO:0004298: threonine-type endopeptidase activity | 4.68E-06 |
| 4 | GO:0004788: thiamine diphosphokinase activity | 6.26E-05 |
| 5 | GO:0016768: spermine synthase activity | 6.26E-05 |
| 6 | GO:0004112: cyclic-nucleotide phosphodiesterase activity | 6.26E-05 |
| 7 | GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity | 6.26E-05 |
| 8 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.52E-04 |
| 9 | GO:0003994: aconitate hydratase activity | 1.52E-04 |
| 10 | GO:0004766: spermidine synthase activity | 1.52E-04 |
| 11 | GO:0018708: thiol S-methyltransferase activity | 1.52E-04 |
| 12 | GO:0015035: protein disulfide oxidoreductase activity | 2.46E-04 |
| 13 | GO:0008430: selenium binding | 2.57E-04 |
| 14 | GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity | 2.57E-04 |
| 15 | GO:0047134: protein-disulfide reductase activity | 2.97E-04 |
| 16 | GO:0004791: thioredoxin-disulfide reductase activity | 3.73E-04 |
| 17 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 3.73E-04 |
| 18 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 4.86E-04 |
| 19 | GO:0070628: proteasome binding | 4.99E-04 |
| 20 | GO:0004470: malic enzyme activity | 4.99E-04 |
| 21 | GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor | 4.99E-04 |
| 22 | GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity | 4.99E-04 |
| 23 | GO:0015301: anion:anion antiporter activity | 6.32E-04 |
| 24 | GO:0005459: UDP-galactose transmembrane transporter activity | 6.32E-04 |
| 25 | GO:0005452: inorganic anion exchanger activity | 6.32E-04 |
| 26 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 6.32E-04 |
| 27 | GO:0031593: polyubiquitin binding | 7.73E-04 |
| 28 | GO:0036402: proteasome-activating ATPase activity | 7.73E-04 |
| 29 | GO:0031369: translation initiation factor binding | 7.73E-04 |
| 30 | GO:0004602: glutathione peroxidase activity | 9.20E-04 |
| 31 | GO:0005347: ATP transmembrane transporter activity | 9.20E-04 |
| 32 | GO:0015217: ADP transmembrane transporter activity | 9.20E-04 |
| 33 | GO:0102391: decanoate--CoA ligase activity | 9.20E-04 |
| 34 | GO:0004747: ribokinase activity | 9.20E-04 |
| 35 | GO:0008233: peptidase activity | 1.06E-03 |
| 36 | GO:0043295: glutathione binding | 1.07E-03 |
| 37 | GO:0004467: long-chain fatty acid-CoA ligase activity | 1.07E-03 |
| 38 | GO:0008865: fructokinase activity | 1.24E-03 |
| 39 | GO:0051287: NAD binding | 1.51E-03 |
| 40 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 1.58E-03 |
| 41 | GO:0030955: potassium ion binding | 1.77E-03 |
| 42 | GO:0004743: pyruvate kinase activity | 1.77E-03 |
| 43 | GO:0004022: alcohol dehydrogenase (NAD) activity | 2.58E-03 |
| 44 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 2.58E-03 |
| 45 | GO:0017025: TBP-class protein binding | 3.03E-03 |
| 46 | GO:0005385: zinc ion transmembrane transporter activity | 3.49E-03 |
| 47 | GO:0043130: ubiquitin binding | 3.49E-03 |
| 48 | GO:0008324: cation transmembrane transporter activity | 3.74E-03 |
| 49 | GO:0003727: single-stranded RNA binding | 4.76E-03 |
| 50 | GO:0046873: metal ion transmembrane transporter activity | 5.59E-03 |
| 51 | GO:0000287: magnesium ion binding | 6.15E-03 |
| 52 | GO:0003684: damaged DNA binding | 7.38E-03 |
| 53 | GO:0016597: amino acid binding | 8.02E-03 |
| 54 | GO:0051213: dioxygenase activity | 8.35E-03 |
| 55 | GO:0015250: water channel activity | 8.35E-03 |
| 56 | GO:0050897: cobalt ion binding | 1.11E-02 |
| 57 | GO:0003697: single-stranded DNA binding | 1.19E-02 |
| 58 | GO:0042393: histone binding | 1.30E-02 |
| 59 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.30E-02 |
| 60 | GO:0004364: glutathione transferase activity | 1.38E-02 |
| 61 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.50E-02 |
| 62 | GO:0015293: symporter activity | 1.54E-02 |
| 63 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.75E-02 |
| 64 | GO:0015171: amino acid transmembrane transporter activity | 1.89E-02 |
| 65 | GO:0004386: helicase activity | 2.40E-02 |
| 66 | GO:0005507: copper ion binding | 2.91E-02 |
| 67 | GO:0015297: antiporter activity | 3.22E-02 |
| 68 | GO:0005524: ATP binding | 3.64E-02 |
| 69 | GO:0008270: zinc ion binding | 3.67E-02 |
| 70 | GO:0008168: methyltransferase activity | 4.42E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005839: proteasome core complex | 4.68E-06 |
| 2 | GO:0000502: proteasome complex | 6.33E-06 |
| 3 | GO:0030173: integral component of Golgi membrane | 1.50E-05 |
| 4 | GO:0019773: proteasome core complex, alpha-subunit complex | 3.49E-05 |
| 5 | GO:0046861: glyoxysomal membrane | 2.57E-04 |
| 6 | GO:0008250: oligosaccharyltransferase complex | 6.32E-04 |
| 7 | GO:0005886: plasma membrane | 7.68E-04 |
| 8 | GO:0031597: cytosolic proteasome complex | 9.20E-04 |
| 9 | GO:0005829: cytosol | 1.04E-03 |
| 10 | GO:0031595: nuclear proteasome complex | 1.07E-03 |
| 11 | GO:0005811: lipid particle | 1.41E-03 |
| 12 | GO:0009514: glyoxysome | 1.41E-03 |
| 13 | GO:0005779: integral component of peroxisomal membrane | 1.41E-03 |
| 14 | GO:0031901: early endosome membrane | 1.58E-03 |
| 15 | GO:0008540: proteasome regulatory particle, base subcomplex | 1.77E-03 |
| 16 | GO:0005665: DNA-directed RNA polymerase II, core complex | 2.37E-03 |
| 17 | GO:0030176: integral component of endoplasmic reticulum membrane | 3.03E-03 |
| 18 | GO:0005777: peroxisome | 4.33E-03 |
| 19 | GO:0005737: cytoplasm | 4.71E-03 |
| 20 | GO:0005773: vacuole | 6.51E-03 |
| 21 | GO:0016021: integral component of membrane | 7.66E-03 |
| 22 | GO:0005778: peroxisomal membrane | 7.70E-03 |
| 23 | GO:0000932: P-body | 8.35E-03 |
| 24 | GO:0005623: cell | 2.70E-02 |
| 25 | GO:0016020: membrane | 2.91E-02 |
| 26 | GO:0009570: chloroplast stroma | 3.05E-02 |
| 27 | GO:0005802: trans-Golgi network | 3.28E-02 |
| 28 | GO:0005783: endoplasmic reticulum | 3.35E-02 |
| 29 | GO:0005768: endosome | 3.72E-02 |