co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G52760

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0048227: plasma membrane to endosome transport	0.00E+00
2	GO:0006069: ethanol oxidation	0.00E+00
3	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
4	GO:0032780: negative regulation of ATPase activity	0.00E+00
5	GO:0006482: protein demethylation	0.00E+00
6	GO:0046292: formaldehyde metabolic process	0.00E+00
7	GO:0030149: sphingolipid catabolic process	0.00E+00
8	GO:0051788: response to misfolded protein	1.29E-06
9	GO:0006101: citrate metabolic process	1.29E-06
10	GO:0055114: oxidation-reduction process	2.98E-06
11	GO:0001676: long-chain fatty acid metabolic process	1.11E-05
12	GO:0046686: response to cadmium ion	2.69E-05
13	GO:0006097: glyoxylate cycle	3.35E-05
14	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	4.99E-05
15	GO:0043248: proteasome assembly	4.99E-05
16	GO:0006102: isocitrate metabolic process	1.20E-04
17	GO:0048455: stamen formation	1.62E-04
18	GO:0006772: thiamine metabolic process	1.62E-04
19	GO:0035266: meristem growth	1.62E-04
20	GO:0007292: female gamete generation	1.62E-04
21	GO:0006805: xenobiotic metabolic process	1.62E-04
22	GO:1990641: response to iron ion starvation	1.62E-04
23	GO:0080173: male-female gamete recognition during double fertilization	1.62E-04
24	GO:1901183: positive regulation of camalexin biosynthetic process	1.62E-04
25	GO:0006098: pentose-phosphate shunt	1.84E-04
26	GO:0009651: response to salt stress	3.12E-04
27	GO:1902000: homogentisate catabolic process	3.69E-04
28	GO:0019441: tryptophan catabolic process to kynurenine	3.69E-04
29	GO:0097054: L-glutamate biosynthetic process	3.69E-04
30	GO:0006597: spermine biosynthetic process	3.69E-04
31	GO:0031648: protein destabilization	3.69E-04
32	GO:0019521: D-gluconate metabolic process	3.69E-04
33	GO:0019374: galactolipid metabolic process	3.69E-04
34	GO:0007051: spindle organization	3.69E-04
35	GO:0019752: carboxylic acid metabolic process	3.69E-04
36	GO:0006511: ubiquitin-dependent protein catabolic process	4.04E-04
37	GO:0006099: tricarboxylic acid cycle	4.14E-04
38	GO:0090351: seedling development	5.00E-04
39	GO:0034976: response to endoplasmic reticulum stress	5.56E-04
40	GO:0010359: regulation of anion channel activity	6.04E-04
41	GO:0010476: gibberellin mediated signaling pathway	6.04E-04
42	GO:0010325: raffinose family oligosaccharide biosynthetic process	6.04E-04
43	GO:0009072: aromatic amino acid family metabolic process	6.04E-04
44	GO:0060968: regulation of gene silencing	6.04E-04
45	GO:0010498: proteasomal protein catabolic process	6.04E-04
46	GO:0009809: lignin biosynthetic process	7.87E-04
47	GO:0030433: ubiquitin-dependent ERAD pathway	8.11E-04
48	GO:2001289: lipid X metabolic process	8.63E-04
49	GO:0072334: UDP-galactose transmembrane transport	8.63E-04
50	GO:0006537: glutamate biosynthetic process	8.63E-04
51	GO:0010255: glucose mediated signaling pathway	8.63E-04
52	GO:0042823: pyridoxal phosphate biosynthetic process	8.63E-04
53	GO:0019676: ammonia assimilation cycle	1.14E-03
54	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	1.14E-03
55	GO:1902584: positive regulation of response to water deprivation	1.14E-03
56	GO:0010363: regulation of plant-type hypersensitive response	1.14E-03
57	GO:0006564: L-serine biosynthetic process	1.45E-03
58	GO:0009229: thiamine diphosphate biosynthetic process	1.45E-03
59	GO:0006405: RNA export from nucleus	1.45E-03
60	GO:0030308: negative regulation of cell growth	1.45E-03
61	GO:0045927: positive regulation of growth	1.45E-03
62	GO:0010193: response to ozone	1.47E-03
63	GO:0007264: small GTPase mediated signal transduction	1.56E-03
64	GO:0000060: protein import into nucleus, translocation	1.78E-03
65	GO:0006574: valine catabolic process	1.78E-03
66	GO:0006014: D-ribose metabolic process	1.78E-03
67	GO:0006751: glutathione catabolic process	1.78E-03
68	GO:0048827: phyllome development	1.78E-03
69	GO:0048232: male gamete generation	1.78E-03
70	GO:1902456: regulation of stomatal opening	1.78E-03
71	GO:0006596: polyamine biosynthetic process	1.78E-03
72	GO:0035435: phosphate ion transmembrane transport	1.78E-03
73	GO:0009408: response to heat	1.86E-03
74	GO:0009099: valine biosynthetic process	2.14E-03
75	GO:0048444: floral organ morphogenesis	2.14E-03
76	GO:0034389: lipid particle organization	2.14E-03
77	GO:0009082: branched-chain amino acid biosynthetic process	2.14E-03
78	GO:0000082: G1/S transition of mitotic cell cycle	2.52E-03
79	GO:0050790: regulation of catalytic activity	2.52E-03
80	GO:0048528: post-embryonic root development	2.52E-03
81	GO:0080186: developmental vegetative growth	2.52E-03
82	GO:0071669: plant-type cell wall organization or biogenesis	2.52E-03
83	GO:0008219: cell death	2.74E-03
84	GO:0048767: root hair elongation	2.87E-03
85	GO:0010078: maintenance of root meristem identity	2.91E-03
86	GO:0006644: phospholipid metabolic process	2.91E-03
87	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.91E-03
88	GO:0009097: isoleucine biosynthetic process	3.33E-03
89	GO:0009657: plastid organization	3.33E-03
90	GO:0010120: camalexin biosynthetic process	3.33E-03
91	GO:0006979: response to oxidative stress	3.52E-03
92	GO:0000373: Group II intron splicing	3.77E-03
93	GO:0009056: catabolic process	3.77E-03
94	GO:0046685: response to arsenic-containing substance	3.77E-03
95	GO:0006631: fatty acid metabolic process	4.10E-03
96	GO:0009098: leucine biosynthetic process	4.22E-03
97	GO:0043069: negative regulation of programmed cell death	4.69E-03
98	GO:0048829: root cap development	4.69E-03
99	GO:0006855: drug transmembrane transport	5.19E-03
100	GO:0010015: root morphogenesis	5.19E-03
101	GO:0015031: protein transport	5.28E-03
102	GO:0046777: protein autophosphorylation	6.03E-03
103	GO:0051603: proteolysis involved in cellular protein catabolic process	6.20E-03
104	GO:0009266: response to temperature stimulus	6.76E-03
105	GO:0009933: meristem structural organization	6.76E-03
106	GO:0007034: vacuolar transport	6.76E-03
107	GO:0006810: transport	6.79E-03
108	GO:0010053: root epidermal cell differentiation	7.32E-03
109	GO:0006508: proteolysis	8.17E-03
110	GO:0007010: cytoskeleton organization	8.48E-03
111	GO:0018105: peptidyl-serine phosphorylation	8.78E-03
112	GO:0031348: negative regulation of defense response	1.04E-02
113	GO:0006012: galactose metabolic process	1.10E-02
114	GO:0009845: seed germination	1.16E-02
115	GO:0016117: carotenoid biosynthetic process	1.24E-02
116	GO:0051028: mRNA transport	1.24E-02
117	GO:0034220: ion transmembrane transport	1.31E-02
118	GO:0010118: stomatal movement	1.31E-02
119	GO:0006520: cellular amino acid metabolic process	1.38E-02
120	GO:0019252: starch biosynthetic process	1.52E-02
121	GO:0009733: response to auxin	1.54E-02
122	GO:0006635: fatty acid beta-oxidation	1.60E-02
123	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.65E-02
124	GO:0010583: response to cyclopentenone	1.67E-02
125	GO:0030163: protein catabolic process	1.75E-02
126	GO:0010252: auxin homeostasis	1.83E-02
127	GO:0006464: cellular protein modification process	1.83E-02
128	GO:0009555: pollen development	1.88E-02
129	GO:0010286: heat acclimation	1.91E-02
130	GO:0009611: response to wounding	1.93E-02
131	GO:0009615: response to virus	2.07E-02
132	GO:0009607: response to biotic stimulus	2.16E-02
133	GO:0010029: regulation of seed germination	2.16E-02
134	GO:0009816: defense response to bacterium, incompatible interaction	2.16E-02
135	GO:0006974: cellular response to DNA damage stimulus	2.24E-02
136	GO:0009658: chloroplast organization	2.29E-02
137	GO:0006888: ER to Golgi vesicle-mediated transport	2.33E-02
138	GO:0006950: response to stress	2.33E-02
139	GO:0010311: lateral root formation	2.60E-02
140	GO:0006499: N-terminal protein myristoylation	2.69E-02
141	GO:0009407: toxin catabolic process	2.69E-02
142	GO:0010043: response to zinc ion	2.78E-02
143	GO:0009910: negative regulation of flower development	2.78E-02
144	GO:0010119: regulation of stomatal movement	2.78E-02
145	GO:0009853: photorespiration	2.97E-02
146	GO:0045087: innate immune response	2.97E-02
147	GO:0006839: mitochondrial transport	3.26E-02
148	GO:0045454: cell redox homeostasis	3.40E-02
149	GO:0009744: response to sucrose	3.55E-02
150	GO:0051707: response to other organism	3.55E-02
151	GO:0009644: response to high light intensity	3.76E-02
152	GO:0009636: response to toxic substance	3.86E-02
153	GO:0009965: leaf morphogenesis	3.86E-02
154	GO:0009737: response to abscisic acid	3.95E-02
155	GO:0032259: methylation	4.01E-02
156	GO:0009846: pollen germination	4.18E-02
157	GO:0048364: root development	4.36E-02
158	GO:0016310: phosphorylation	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0016508: long-chain-enoyl-CoA hydratase activity	0.00E+00
2	GO:0051723: protein methylesterase activity	0.00E+00
3	GO:0042030: ATPase inhibitor activity	0.00E+00
4	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
5	GO:0080007: S-nitrosoglutathione reductase activity	0.00E+00
6	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
7	GO:0051670: inulinase activity	0.00E+00
8	GO:0015930: glutamate synthase activity	0.00E+00
9	GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity	0.00E+00
10	GO:0003994: aconitate hydratase activity	1.29E-06
11	GO:0005093: Rab GDP-dissociation inhibitor activity	4.78E-06
12	GO:0005524: ATP binding	2.64E-05
13	GO:0005496: steroid binding	3.35E-05
14	GO:0036402: proteasome-activating ATPase activity	4.99E-05
15	GO:0031593: polyubiquitin binding	4.99E-05
16	GO:0102391: decanoate--CoA ligase activity	6.99E-05
17	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	6.99E-05
18	GO:0016491: oxidoreductase activity	8.91E-05
19	GO:0004467: long-chain fatty acid-CoA ligase activity	9.33E-05
20	GO:0016831: carboxy-lyase activity	9.33E-05
21	GO:0052747: sinapyl alcohol dehydrogenase activity	1.20E-04
22	GO:0031219: levanase activity	1.62E-04
23	GO:0016768: spermine synthase activity	1.62E-04
24	GO:0016041: glutamate synthase (ferredoxin) activity	1.62E-04
25	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	1.62E-04
26	GO:0051669: fructan beta-fructosidase activity	1.62E-04
27	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	1.62E-04
28	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	1.62E-04
29	GO:0004788: thiamine diphosphokinase activity	1.62E-04
30	GO:0008171: O-methyltransferase activity	2.60E-04
31	GO:0005096: GTPase activator activity	3.05E-04
32	GO:0045551: cinnamyl-alcohol dehydrogenase activity	3.48E-04
33	GO:0015036: disulfide oxidoreductase activity	3.69E-04
34	GO:0008517: folic acid transporter activity	3.69E-04
35	GO:0004776: succinate-CoA ligase (GDP-forming) activity	3.69E-04
36	GO:0010331: gibberellin binding	3.69E-04
37	GO:0004617: phosphoglycerate dehydrogenase activity	3.69E-04
38	GO:0004766: spermidine synthase activity	3.69E-04
39	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	3.69E-04
40	GO:0004775: succinate-CoA ligase (ADP-forming) activity	3.69E-04
41	GO:0019172: glyoxalase III activity	3.69E-04
42	GO:0004061: arylformamidase activity	3.69E-04
43	GO:0004022: alcohol dehydrogenase (NAD) activity	3.96E-04
44	GO:0017025: TBP-class protein binding	5.00E-04
45	GO:0036374: glutathione hydrolase activity	6.04E-04
46	GO:0016805: dipeptidase activity	6.04E-04
47	GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity	6.04E-04
48	GO:0003840: gamma-glutamyltransferase activity	6.04E-04
49	GO:0016887: ATPase activity	7.98E-04
50	GO:0052656: L-isoleucine transaminase activity	8.63E-04
51	GO:0004165: dodecenoyl-CoA delta-isomerase activity	8.63E-04
52	GO:0052654: L-leucine transaminase activity	8.63E-04
53	GO:0004300: enoyl-CoA hydratase activity	8.63E-04
54	GO:0052655: L-valine transaminase activity	8.63E-04
55	GO:0008276: protein methyltransferase activity	8.63E-04
56	GO:0001653: peptide receptor activity	8.63E-04
57	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	8.63E-04
58	GO:0005215: transporter activity	1.10E-03
59	GO:0010279: indole-3-acetic acid amido synthetase activity	1.14E-03
60	GO:0009916: alternative oxidase activity	1.14E-03
61	GO:0004737: pyruvate decarboxylase activity	1.14E-03
62	GO:0004084: branched-chain-amino-acid transaminase activity	1.14E-03
63	GO:0051538: 3 iron, 4 sulfur cluster binding	1.45E-03
64	GO:0005459: UDP-galactose transmembrane transporter activity	1.45E-03
65	GO:0030976: thiamine pyrophosphate binding	1.78E-03
66	GO:0005507: copper ion binding	1.87E-03
67	GO:0003978: UDP-glucose 4-epimerase activity	2.14E-03
68	GO:0004656: procollagen-proline 4-dioxygenase activity	2.14E-03
69	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	2.14E-03
70	GO:0004747: ribokinase activity	2.14E-03
71	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.35E-03
72	GO:0004683: calmodulin-dependent protein kinase activity	2.47E-03
73	GO:0004620: phospholipase activity	2.52E-03
74	GO:0008235: metalloexopeptidase activity	2.52E-03
75	GO:0008865: fructokinase activity	2.91E-03
76	GO:0005515: protein binding	3.06E-03
77	GO:0071949: FAD binding	3.77E-03
78	GO:0051539: 4 iron, 4 sulfur cluster binding	3.93E-03
79	GO:0047617: acyl-CoA hydrolase activity	4.22E-03
80	GO:0045309: protein phosphorylated amino acid binding	4.22E-03
81	GO:0004364: glutathione transferase activity	4.27E-03
82	GO:0004177: aminopeptidase activity	5.19E-03
83	GO:0008559: xenobiotic-transporting ATPase activity	5.19E-03
84	GO:0019904: protein domain specific binding	5.19E-03
85	GO:0008794: arsenate reductase (glutaredoxin) activity	5.19E-03
86	GO:0051287: NAD binding	5.38E-03
87	GO:0005315: inorganic phosphate transmembrane transporter activity	6.22E-03
88	GO:0015114: phosphate ion transmembrane transporter activity	6.22E-03
89	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	6.22E-03
90	GO:0008234: cysteine-type peptidase activity	6.63E-03
91	GO:0008131: primary amine oxidase activity	6.76E-03
92	GO:0005516: calmodulin binding	8.25E-03
93	GO:0031418: L-ascorbic acid binding	8.48E-03
94	GO:0043424: protein histidine kinase binding	9.09E-03
95	GO:0004298: threonine-type endopeptidase activity	9.72E-03
96	GO:0005509: calcium ion binding	1.14E-02
97	GO:0003756: protein disulfide isomerase activity	1.17E-02
98	GO:0016787: hydrolase activity	1.31E-02
99	GO:0008536: Ran GTPase binding	1.38E-02
100	GO:0010181: FMN binding	1.45E-02
101	GO:0048038: quinone binding	1.60E-02
102	GO:0004197: cysteine-type endopeptidase activity	1.67E-02
103	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.88E-02
104	GO:0005200: structural constituent of cytoskeleton	1.91E-02
105	GO:0016301: kinase activity	1.93E-02
106	GO:0016597: amino acid binding	1.99E-02
107	GO:0015250: water channel activity	2.07E-02
108	GO:0000287: magnesium ion binding	2.25E-02
109	GO:0008270: zinc ion binding	2.44E-02
110	GO:0015238: drug transmembrane transporter activity	2.60E-02
111	GO:0004222: metalloendopeptidase activity	2.69E-02
112	GO:0030145: manganese ion binding	2.78E-02
113	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.97E-02
114	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.16E-02
115	GO:0003924: GTPase activity	4.18E-02

Rank	GO Term	Adjusted P value
1	GO:0046862: chromoplast membrane	0.00E+00
2	GO:0019822: P4 peroxisome	0.00E+00
3	GO:0005829: cytosol	2.01E-10
4	GO:0000502: proteasome complex	4.80E-06
5	GO:0008540: proteasome regulatory particle, base subcomplex	4.86E-06
6	GO:0005777: peroxisome	4.68E-05
7	GO:0031597: cytosolic proteasome complex	6.99E-05
8	GO:0005783: endoplasmic reticulum	7.13E-05
9	GO:0031595: nuclear proteasome complex	9.33E-05
10	GO:0005773: vacuole	9.77E-05
11	GO:0009514: glyoxysome	1.50E-04
12	GO:0005737: cytoplasm	1.63E-04
13	GO:0005774: vacuolar membrane	3.42E-04
14	GO:0031314: extrinsic component of mitochondrial inner membrane	3.69E-04
15	GO:0005618: cell wall	4.94E-04
16	GO:0046861: glyoxysomal membrane	6.04E-04
17	GO:0030139: endocytic vesicle	6.04E-04
18	GO:0005794: Golgi apparatus	1.77E-03
19	GO:0030127: COPII vesicle coat	1.78E-03
20	GO:0030173: integral component of Golgi membrane	2.14E-03
21	GO:0005886: plasma membrane	2.87E-03
22	GO:0005811: lipid particle	3.33E-03
23	GO:0009570: chloroplast stroma	5.05E-03
24	GO:0005635: nuclear envelope	6.41E-03
25	GO:0005764: lysosome	6.76E-03
26	GO:0030176: integral component of endoplasmic reticulum membrane	7.32E-03
27	GO:0005730: nucleolus	8.68E-03
28	GO:0045271: respiratory chain complex I	9.09E-03
29	GO:0070469: respiratory chain	9.09E-03
30	GO:0005839: proteasome core complex	9.72E-03
31	GO:0005778: peroxisomal membrane	1.91E-02
32	GO:0005788: endoplasmic reticulum lumen	2.16E-02
33	GO:0016020: membrane	2.29E-02
34	GO:0005643: nuclear pore	2.51E-02
35	GO:0000325: plant-type vacuole	2.78E-02
36	GO:0005819: spindle	3.16E-02
37	GO:0031902: late endosome membrane	3.35E-02
38	GO:0005856: cytoskeleton	3.86E-02
39	GO:0005743: mitochondrial inner membrane	3.89E-02
40	GO:0005739: mitochondrion	4.00E-02
41	GO:0031966: mitochondrial membrane	4.18E-02