Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G52420

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0046292: formaldehyde metabolic process0.00E+00
2GO:0006983: ER overload response0.00E+00
3GO:0006069: ethanol oxidation0.00E+00
4GO:0006102: isocitrate metabolic process5.95E-06
5GO:0006099: tricarboxylic acid cycle9.71E-06
6GO:0006772: thiamine metabolic process2.41E-05
7GO:0035266: meristem growth2.41E-05
8GO:0007292: female gamete generation2.41E-05
9GO:0090351: seedling development3.35E-05
10GO:0000162: tryptophan biosynthetic process3.83E-05
11GO:0051262: protein tetramerization6.16E-05
12GO:0051788: response to misfolded protein6.16E-05
13GO:0006101: citrate metabolic process6.16E-05
14GO:0043066: negative regulation of apoptotic process6.16E-05
15GO:0046686: response to cadmium ion6.82E-05
16GO:0045793: positive regulation of cell size1.09E-04
17GO:0060968: regulation of gene silencing1.09E-04
18GO:0032877: positive regulation of DNA endoreduplication1.62E-04
19GO:0070534: protein K63-linked ubiquitination2.21E-04
20GO:0051781: positive regulation of cell division2.21E-04
21GO:1902584: positive regulation of response to water deprivation2.21E-04
22GO:0006499: N-terminal protein myristoylation2.65E-04
23GO:0006097: glyoxylate cycle2.84E-04
24GO:0009229: thiamine diphosphate biosynthetic process2.84E-04
25GO:0045927: positive regulation of growth2.84E-04
26GO:0006564: L-serine biosynthetic process2.84E-04
27GO:0006301: postreplication repair3.51E-04
28GO:0048827: phyllome development3.51E-04
29GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation3.51E-04
30GO:0048232: male gamete generation3.51E-04
31GO:0043248: proteasome assembly3.51E-04
32GO:0006014: D-ribose metabolic process3.51E-04
33GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly3.51E-04
34GO:0015977: carbon fixation4.20E-04
35GO:0034389: lipid particle organization4.20E-04
36GO:0098655: cation transmembrane transport4.20E-04
37GO:0050790: regulation of catalytic activity4.92E-04
38GO:0080186: developmental vegetative growth4.92E-04
39GO:0051603: proteolysis involved in cellular protein catabolic process5.42E-04
40GO:0010078: maintenance of root meristem identity5.68E-04
41GO:0009821: alkaloid biosynthetic process7.25E-04
42GO:0071577: zinc II ion transmembrane transport8.07E-04
43GO:0043069: negative regulation of programmed cell death8.92E-04
44GO:0048829: root cap development8.92E-04
45GO:0010015: root morphogenesis9.78E-04
46GO:0000038: very long-chain fatty acid metabolic process9.78E-04
47GO:0006511: ubiquitin-dependent protein catabolic process1.14E-03
48GO:0009933: meristem structural organization1.25E-03
49GO:0010053: root epidermal cell differentiation1.35E-03
50GO:0010039: response to iron ion1.35E-03
51GO:0006487: protein N-linked glycosylation1.55E-03
52GO:0030433: ubiquitin-dependent ERAD pathway1.87E-03
53GO:0000413: protein peptidyl-prolyl isomerization2.33E-03
54GO:0019252: starch biosynthetic process2.70E-03
55GO:0007264: small GTPase mediated signal transduction2.95E-03
56GO:0010286: heat acclimation3.35E-03
57GO:0000910: cytokinesis3.49E-03
58GO:0009615: response to virus3.63E-03
59GO:0001666: response to hypoxia3.63E-03
60GO:0008219: cell death4.34E-03
61GO:0010311: lateral root formation4.49E-03
62GO:0009407: toxin catabolic process4.64E-03
63GO:0010043: response to zinc ion4.80E-03
64GO:0045087: innate immune response5.11E-03
65GO:0009965: leaf morphogenesis6.59E-03
66GO:0006812: cation transport7.11E-03
67GO:0048367: shoot system development8.59E-03
68GO:0048316: seed development8.59E-03
69GO:0009620: response to fungus8.97E-03
70GO:0009058: biosynthetic process1.16E-02
71GO:0042742: defense response to bacterium1.22E-02
72GO:0016036: cellular response to phosphate starvation1.34E-02
73GO:0040008: regulation of growth1.36E-02
74GO:0010150: leaf senescence1.40E-02
75GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.52E-02
76GO:0010468: regulation of gene expression1.59E-02
77GO:0009826: unidimensional cell growth1.86E-02
78GO:0009723: response to ethylene2.12E-02
79GO:0048366: leaf development2.15E-02
80GO:0015979: photosynthesis2.45E-02
81GO:0045454: cell redox homeostasis2.54E-02
82GO:0032259: methylation2.86E-02
83GO:0009751: response to salicylic acid2.92E-02
84GO:0009408: response to heat2.95E-02
85GO:0048364: root development3.04E-02
86GO:0009753: response to jasmonic acid3.10E-02
87GO:0009873: ethylene-activated signaling pathway3.54E-02
88GO:0009734: auxin-activated signaling pathway3.76E-02
89GO:0009651: response to salt stress4.10E-02
90GO:0009555: pollen development4.43E-02
91GO:0009611: response to wounding4.50E-02
RankGO TermAdjusted P value
1GO:0080007: S-nitrosoglutathione reductase activity0.00E+00
2GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity0.00E+00
3GO:0004425: indole-3-glycerol-phosphate synthase activity2.41E-05
4GO:0004112: cyclic-nucleotide phosphodiesterase activity2.41E-05
5GO:0004048: anthranilate phosphoribosyltransferase activity2.41E-05
6GO:0004788: thiamine diphosphokinase activity2.41E-05
7GO:0004617: phosphoglycerate dehydrogenase activity6.16E-05
8GO:0003994: aconitate hydratase activity6.16E-05
9GO:0018708: thiol S-methyltransferase activity6.16E-05
10GO:0008430: selenium binding1.09E-04
11GO:0008964: phosphoenolpyruvate carboxylase activity1.09E-04
12GO:0004449: isocitrate dehydrogenase (NAD+) activity1.62E-04
13GO:0010011: auxin binding2.21E-04
14GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity2.84E-04
15GO:0036402: proteasome-activating ATPase activity3.51E-04
16GO:0004747: ribokinase activity4.20E-04
17GO:0004602: glutathione peroxidase activity4.20E-04
18GO:0043295: glutathione binding4.92E-04
19GO:0008865: fructokinase activity5.68E-04
20GO:0016844: strictosidine synthase activity8.07E-04
21GO:0004022: alcohol dehydrogenase (NAD) activity1.16E-03
22GO:0005507: copper ion binding1.21E-03
23GO:0017025: TBP-class protein binding1.35E-03
24GO:0005385: zinc ion transmembrane transporter activity1.55E-03
25GO:0008324: cation transmembrane transporter activity1.65E-03
26GO:0004298: threonine-type endopeptidase activity1.76E-03
27GO:0046873: metal ion transmembrane transporter activity2.45E-03
28GO:0004872: receptor activity2.70E-03
29GO:0004197: cysteine-type endopeptidase activity2.95E-03
30GO:0016597: amino acid binding3.49E-03
31GO:0051539: 4 iron, 4 sulfur cluster binding5.59E-03
32GO:0004364: glutathione transferase activity5.91E-03
33GO:0003755: peptidyl-prolyl cis-trans isomerase activity6.76E-03
34GO:0051287: NAD binding6.94E-03
35GO:0031625: ubiquitin protein ligase binding8.02E-03
36GO:0008234: cysteine-type peptidase activity8.02E-03
37GO:0008168: methyltransferase activity1.86E-02
38GO:0016788: hydrolase activity, acting on ester bonds1.94E-02
39GO:0008233: peptidase activity2.20E-02
40GO:0061630: ubiquitin protein ligase activity2.31E-02
41GO:0016887: ATPase activity4.03E-02
RankGO TermAdjusted P value
1GO:0005829: cytosol3.18E-05
2GO:0005737: cytoplasm7.07E-05
3GO:0009570: chloroplast stroma2.12E-04
4GO:0031372: UBC13-MMS2 complex2.21E-04
5GO:0008250: oligosaccharyltransferase complex2.84E-04
6GO:0031597: cytosolic proteasome complex4.20E-04
7GO:0031595: nuclear proteasome complex4.92E-04
8GO:0000502: proteasome complex5.25E-04
9GO:0005811: lipid particle6.45E-04
10GO:0005773: vacuole7.29E-04
11GO:0008540: proteasome regulatory particle, base subcomplex8.07E-04
12GO:0005783: endoplasmic reticulum1.17E-03
13GO:0005764: lysosome1.25E-03
14GO:0005839: proteasome core complex1.76E-03
15GO:0009507: chloroplast3.76E-03
16GO:0005788: endoplasmic reticulum lumen3.76E-03
17GO:0005635: nuclear envelope7.84E-03
18GO:0048046: apoplast9.60E-03
19GO:0005623: cell1.14E-02
20GO:0005886: plasma membrane1.27E-02
21GO:0005615: extracellular space1.52E-02
22GO:0005789: endoplasmic reticulum membrane1.87E-02
23GO:0005794: Golgi apparatus2.16E-02
24GO:0005774: vacuolar membrane4.23E-02
25GO:0009506: plasmodesma4.84E-02
26GO:0005777: peroxisome4.89E-02
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Gene type



Gene DE type