GO Enrichment Analysis of Co-expressed Genes with
AT1G52140
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 2 | GO:2000505: regulation of energy homeostasis | 0.00E+00 |
| 3 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 4 | GO:0006810: transport | 2.79E-06 |
| 5 | GO:0034220: ion transmembrane transport | 6.01E-06 |
| 6 | GO:0009773: photosynthetic electron transport in photosystem I | 1.72E-05 |
| 7 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.90E-05 |
| 8 | GO:0080170: hydrogen peroxide transmembrane transport | 1.90E-05 |
| 9 | GO:0006546: glycine catabolic process | 3.46E-05 |
| 10 | GO:0015994: chlorophyll metabolic process | 3.46E-05 |
| 11 | GO:0006833: water transport | 4.76E-05 |
| 12 | GO:0009958: positive gravitropism | 1.59E-04 |
| 13 | GO:0071370: cellular response to gibberellin stimulus | 2.20E-04 |
| 14 | GO:0000481: maturation of 5S rRNA | 2.20E-04 |
| 15 | GO:0010028: xanthophyll cycle | 2.20E-04 |
| 16 | GO:0034337: RNA folding | 2.20E-04 |
| 17 | GO:0007165: signal transduction | 2.82E-04 |
| 18 | GO:0010206: photosystem II repair | 2.86E-04 |
| 19 | GO:0009638: phototropism | 3.41E-04 |
| 20 | GO:0010541: acropetal auxin transport | 4.90E-04 |
| 21 | GO:0001736: establishment of planar polarity | 4.90E-04 |
| 22 | GO:0016122: xanthophyll metabolic process | 4.90E-04 |
| 23 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 4.90E-04 |
| 24 | GO:0055129: L-proline biosynthetic process | 4.90E-04 |
| 25 | GO:0005985: sucrose metabolic process | 7.56E-04 |
| 26 | GO:0006518: peptide metabolic process | 7.98E-04 |
| 27 | GO:0045493: xylan catabolic process | 7.98E-04 |
| 28 | GO:2001295: malonyl-CoA biosynthetic process | 7.98E-04 |
| 29 | GO:0033591: response to L-ascorbic acid | 7.98E-04 |
| 30 | GO:0006000: fructose metabolic process | 7.98E-04 |
| 31 | GO:0010160: formation of animal organ boundary | 7.98E-04 |
| 32 | GO:0009926: auxin polar transport | 9.24E-04 |
| 33 | GO:1901332: negative regulation of lateral root development | 1.14E-03 |
| 34 | GO:0046836: glycolipid transport | 1.14E-03 |
| 35 | GO:0034059: response to anoxia | 1.14E-03 |
| 36 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 1.14E-03 |
| 37 | GO:0010023: proanthocyanidin biosynthetic process | 1.51E-03 |
| 38 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.51E-03 |
| 39 | GO:0045727: positive regulation of translation | 1.51E-03 |
| 40 | GO:0030104: water homeostasis | 1.51E-03 |
| 41 | GO:0009723: response to ethylene | 1.78E-03 |
| 42 | GO:2000762: regulation of phenylpropanoid metabolic process | 1.93E-03 |
| 43 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 2.38E-03 |
| 44 | GO:0006596: polyamine biosynthetic process | 2.38E-03 |
| 45 | GO:0006561: proline biosynthetic process | 2.38E-03 |
| 46 | GO:0048759: xylem vessel member cell differentiation | 2.38E-03 |
| 47 | GO:0006751: glutathione catabolic process | 2.38E-03 |
| 48 | GO:0042549: photosystem II stabilization | 2.38E-03 |
| 49 | GO:0010256: endomembrane system organization | 2.38E-03 |
| 50 | GO:0060918: auxin transport | 2.38E-03 |
| 51 | GO:1902456: regulation of stomatal opening | 2.38E-03 |
| 52 | GO:0015979: photosynthesis | 2.42E-03 |
| 53 | GO:1900056: negative regulation of leaf senescence | 3.36E-03 |
| 54 | GO:0010196: nonphotochemical quenching | 3.36E-03 |
| 55 | GO:0032508: DNA duplex unwinding | 3.90E-03 |
| 56 | GO:0008610: lipid biosynthetic process | 3.90E-03 |
| 57 | GO:0010311: lateral root formation | 4.40E-03 |
| 58 | GO:0032544: plastid translation | 4.47E-03 |
| 59 | GO:0006002: fructose 6-phosphate metabolic process | 4.47E-03 |
| 60 | GO:0010218: response to far red light | 4.61E-03 |
| 61 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 5.06E-03 |
| 62 | GO:0006779: porphyrin-containing compound biosynthetic process | 5.68E-03 |
| 63 | GO:1900865: chloroplast RNA modification | 5.68E-03 |
| 64 | GO:0048829: root cap development | 6.32E-03 |
| 65 | GO:0006782: protoporphyrinogen IX biosynthetic process | 6.32E-03 |
| 66 | GO:1903507: negative regulation of nucleic acid-templated transcription | 6.98E-03 |
| 67 | GO:0048765: root hair cell differentiation | 6.98E-03 |
| 68 | GO:0009684: indoleacetic acid biosynthetic process | 6.98E-03 |
| 69 | GO:0010015: root morphogenesis | 6.98E-03 |
| 70 | GO:0009807: lignan biosynthetic process | 6.98E-03 |
| 71 | GO:0008361: regulation of cell size | 7.68E-03 |
| 72 | GO:0006790: sulfur compound metabolic process | 7.68E-03 |
| 73 | GO:0016024: CDP-diacylglycerol biosynthetic process | 7.68E-03 |
| 74 | GO:0009718: anthocyanin-containing compound biosynthetic process | 8.39E-03 |
| 75 | GO:0006094: gluconeogenesis | 8.39E-03 |
| 76 | GO:0009767: photosynthetic electron transport chain | 8.39E-03 |
| 77 | GO:0005986: sucrose biosynthetic process | 8.39E-03 |
| 78 | GO:0010540: basipetal auxin transport | 9.13E-03 |
| 79 | GO:0010143: cutin biosynthetic process | 9.13E-03 |
| 80 | GO:0019253: reductive pentose-phosphate cycle | 9.13E-03 |
| 81 | GO:0009585: red, far-red light phototransduction | 9.22E-03 |
| 82 | GO:0010030: positive regulation of seed germination | 9.90E-03 |
| 83 | GO:0046854: phosphatidylinositol phosphorylation | 9.90E-03 |
| 84 | GO:0045454: cell redox homeostasis | 1.21E-02 |
| 85 | GO:0007017: microtubule-based process | 1.23E-02 |
| 86 | GO:0055085: transmembrane transport | 1.23E-02 |
| 87 | GO:0003333: amino acid transmembrane transport | 1.32E-02 |
| 88 | GO:0061077: chaperone-mediated protein folding | 1.32E-02 |
| 89 | GO:0009624: response to nematode | 1.32E-02 |
| 90 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.40E-02 |
| 91 | GO:0010017: red or far-red light signaling pathway | 1.40E-02 |
| 92 | GO:0035428: hexose transmembrane transport | 1.40E-02 |
| 93 | GO:0006012: galactose metabolic process | 1.49E-02 |
| 94 | GO:0009306: protein secretion | 1.58E-02 |
| 95 | GO:0048443: stamen development | 1.58E-02 |
| 96 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.68E-02 |
| 97 | GO:0080022: primary root development | 1.77E-02 |
| 98 | GO:0010087: phloem or xylem histogenesis | 1.77E-02 |
| 99 | GO:0042631: cellular response to water deprivation | 1.77E-02 |
| 100 | GO:0008152: metabolic process | 1.78E-02 |
| 101 | GO:0006662: glycerol ether metabolic process | 1.87E-02 |
| 102 | GO:0048868: pollen tube development | 1.87E-02 |
| 103 | GO:0046323: glucose import | 1.87E-02 |
| 104 | GO:0080156: mitochondrial mRNA modification | 2.17E-02 |
| 105 | GO:0010193: response to ozone | 2.17E-02 |
| 106 | GO:0007623: circadian rhythm | 2.28E-02 |
| 107 | GO:0030163: protein catabolic process | 2.38E-02 |
| 108 | GO:0071281: cellular response to iron ion | 2.38E-02 |
| 109 | GO:0009734: auxin-activated signaling pathway | 2.42E-02 |
| 110 | GO:0009639: response to red or far red light | 2.49E-02 |
| 111 | GO:0010027: thylakoid membrane organization | 2.82E-02 |
| 112 | GO:0010411: xyloglucan metabolic process | 3.17E-02 |
| 113 | GO:0015995: chlorophyll biosynthetic process | 3.17E-02 |
| 114 | GO:0018298: protein-chromophore linkage | 3.41E-02 |
| 115 | GO:0009817: defense response to fungus, incompatible interaction | 3.41E-02 |
| 116 | GO:0000160: phosphorelay signal transduction system | 3.53E-02 |
| 117 | GO:0048527: lateral root development | 3.78E-02 |
| 118 | GO:0009409: response to cold | 3.84E-02 |
| 119 | GO:0006865: amino acid transport | 3.91E-02 |
| 120 | GO:0009637: response to blue light | 4.03E-02 |
| 121 | GO:0009867: jasmonic acid mediated signaling pathway | 4.03E-02 |
| 122 | GO:0034599: cellular response to oxidative stress | 4.16E-02 |
| 123 | GO:0005975: carbohydrate metabolic process | 4.53E-02 |
| 124 | GO:0006631: fatty acid metabolic process | 4.56E-02 |
| 125 | GO:0010114: response to red light | 4.83E-02 |
| 126 | GO:0009640: photomorphogenesis | 4.83E-02 |
| 127 | GO:0006508: proteolysis | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 2 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 3 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 4 | GO:0047513: 1,2-alpha-L-fucosidase activity | 0.00E+00 |
| 5 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 6 | GO:0010487: thermospermine synthase activity | 0.00E+00 |
| 7 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 8 | GO:0043864: indoleacetamide hydrolase activity | 0.00E+00 |
| 9 | GO:0015250: water channel activity | 2.42E-05 |
| 10 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 3.46E-05 |
| 11 | GO:0005528: FK506 binding | 5.63E-05 |
| 12 | GO:0016768: spermine synthase activity | 2.20E-04 |
| 13 | GO:0004349: glutamate 5-kinase activity | 2.20E-04 |
| 14 | GO:0004350: glutamate-5-semialdehyde dehydrogenase activity | 2.20E-04 |
| 15 | GO:0003867: 4-aminobutyrate transaminase activity | 2.20E-04 |
| 16 | GO:0004802: transketolase activity | 4.90E-04 |
| 17 | GO:0010283: pinoresinol reductase activity | 4.90E-04 |
| 18 | GO:0047746: chlorophyllase activity | 4.90E-04 |
| 19 | GO:0016868: intramolecular transferase activity, phosphotransferases | 4.90E-04 |
| 20 | GO:0003839: gamma-glutamylcyclotransferase activity | 4.90E-04 |
| 21 | GO:0004047: aminomethyltransferase activity | 4.90E-04 |
| 22 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 4.90E-04 |
| 23 | GO:0004075: biotin carboxylase activity | 7.98E-04 |
| 24 | GO:0030267: glyoxylate reductase (NADP) activity | 7.98E-04 |
| 25 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.12E-03 |
| 26 | GO:0017089: glycolipid transporter activity | 1.14E-03 |
| 27 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.14E-03 |
| 28 | GO:0009044: xylan 1,4-beta-xylosidase activity | 1.51E-03 |
| 29 | GO:0046556: alpha-L-arabinofuranosidase activity | 1.51E-03 |
| 30 | GO:0010011: auxin binding | 1.51E-03 |
| 31 | GO:0051861: glycolipid binding | 1.51E-03 |
| 32 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 1.51E-03 |
| 33 | GO:0010328: auxin influx transmembrane transporter activity | 1.51E-03 |
| 34 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 1.51E-03 |
| 35 | GO:0003989: acetyl-CoA carboxylase activity | 1.93E-03 |
| 36 | GO:0004040: amidase activity | 1.93E-03 |
| 37 | GO:0048038: quinone binding | 2.23E-03 |
| 38 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 2.38E-03 |
| 39 | GO:0008200: ion channel inhibitor activity | 2.38E-03 |
| 40 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.38E-03 |
| 41 | GO:0042578: phosphoric ester hydrolase activity | 2.38E-03 |
| 42 | GO:0016791: phosphatase activity | 2.70E-03 |
| 43 | GO:0051920: peroxiredoxin activity | 2.86E-03 |
| 44 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.86E-03 |
| 45 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.86E-03 |
| 46 | GO:0004017: adenylate kinase activity | 2.86E-03 |
| 47 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.86E-03 |
| 48 | GO:0004620: phospholipase activity | 3.36E-03 |
| 49 | GO:0009881: photoreceptor activity | 3.36E-03 |
| 50 | GO:0004564: beta-fructofuranosidase activity | 3.90E-03 |
| 51 | GO:0016209: antioxidant activity | 3.90E-03 |
| 52 | GO:0004034: aldose 1-epimerase activity | 3.90E-03 |
| 53 | GO:0005096: GTPase activator activity | 4.40E-03 |
| 54 | GO:0004575: sucrose alpha-glucosidase activity | 5.68E-03 |
| 55 | GO:0008378: galactosyltransferase activity | 7.68E-03 |
| 56 | GO:0031072: heat shock protein binding | 8.39E-03 |
| 57 | GO:0000155: phosphorelay sensor kinase activity | 8.39E-03 |
| 58 | GO:0019888: protein phosphatase regulator activity | 8.39E-03 |
| 59 | GO:0004565: beta-galactosidase activity | 8.39E-03 |
| 60 | GO:0010329: auxin efflux transmembrane transporter activity | 8.39E-03 |
| 61 | GO:0008266: poly(U) RNA binding | 9.13E-03 |
| 62 | GO:0003714: transcription corepressor activity | 1.15E-02 |
| 63 | GO:0004871: signal transducer activity | 1.28E-02 |
| 64 | GO:0004176: ATP-dependent peptidase activity | 1.32E-02 |
| 65 | GO:0003727: single-stranded RNA binding | 1.58E-02 |
| 66 | GO:0003756: protein disulfide isomerase activity | 1.58E-02 |
| 67 | GO:0047134: protein-disulfide reductase activity | 1.68E-02 |
| 68 | GO:0004252: serine-type endopeptidase activity | 1.83E-02 |
| 69 | GO:0050662: coenzyme binding | 1.97E-02 |
| 70 | GO:0004791: thioredoxin-disulfide reductase activity | 1.97E-02 |
| 71 | GO:0016853: isomerase activity | 1.97E-02 |
| 72 | GO:0005355: glucose transmembrane transporter activity | 1.97E-02 |
| 73 | GO:0004518: nuclease activity | 2.28E-02 |
| 74 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.38E-02 |
| 75 | GO:0005200: structural constituent of cytoskeleton | 2.60E-02 |
| 76 | GO:0008483: transaminase activity | 2.60E-02 |
| 77 | GO:0016787: hydrolase activity | 2.73E-02 |
| 78 | GO:0008236: serine-type peptidase activity | 3.29E-02 |
| 79 | GO:0008168: methyltransferase activity | 3.39E-02 |
| 80 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.41E-02 |
| 81 | GO:0015238: drug transmembrane transporter activity | 3.53E-02 |
| 82 | GO:0004601: peroxidase activity | 3.53E-02 |
| 83 | GO:0004222: metalloendopeptidase activity | 3.66E-02 |
| 84 | GO:0016491: oxidoreductase activity | 3.69E-02 |
| 85 | GO:0003993: acid phosphatase activity | 4.16E-02 |
| 86 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 4.54E-02 |
| 87 | GO:0004185: serine-type carboxypeptidase activity | 4.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 2 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 9.89E-19 |
| 4 | GO:0009534: chloroplast thylakoid | 1.07E-16 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 6.07E-13 |
| 6 | GO:0009570: chloroplast stroma | 8.07E-11 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 3.38E-10 |
| 8 | GO:0030095: chloroplast photosystem II | 8.83E-09 |
| 9 | GO:0009941: chloroplast envelope | 7.43E-07 |
| 10 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 7.45E-06 |
| 11 | GO:0009654: photosystem II oxygen evolving complex | 6.57E-05 |
| 12 | GO:0009579: thylakoid | 1.69E-04 |
| 13 | GO:0019898: extrinsic component of membrane | 1.95E-04 |
| 14 | GO:0009344: nitrite reductase complex [NAD(P)H] | 2.20E-04 |
| 15 | GO:0043674: columella | 2.20E-04 |
| 16 | GO:0031977: thylakoid lumen | 8.36E-04 |
| 17 | GO:0009505: plant-type cell wall | 9.71E-04 |
| 18 | GO:0042651: thylakoid membrane | 1.02E-03 |
| 19 | GO:0005960: glycine cleavage complex | 1.14E-03 |
| 20 | GO:0009531: secondary cell wall | 1.14E-03 |
| 21 | GO:0005775: vacuolar lumen | 1.14E-03 |
| 22 | GO:0010319: stromule | 2.87E-03 |
| 23 | GO:0042807: central vacuole | 3.36E-03 |
| 24 | GO:0009986: cell surface | 3.36E-03 |
| 25 | GO:0009533: chloroplast stromal thylakoid | 3.36E-03 |
| 26 | GO:0048046: apoplast | 3.54E-03 |
| 27 | GO:0009538: photosystem I reaction center | 3.90E-03 |
| 28 | GO:0042644: chloroplast nucleoid | 5.06E-03 |
| 29 | GO:0045298: tubulin complex | 5.06E-03 |
| 30 | GO:0005887: integral component of plasma membrane | 5.70E-03 |
| 31 | GO:0000159: protein phosphatase type 2A complex | 6.98E-03 |
| 32 | GO:0032040: small-subunit processome | 7.68E-03 |
| 33 | GO:0009508: plastid chromosome | 8.39E-03 |
| 34 | GO:0016020: membrane | 1.38E-02 |
| 35 | GO:0010287: plastoglobule | 1.56E-02 |
| 36 | GO:0009705: plant-type vacuole membrane | 2.28E-02 |
| 37 | GO:0009295: nucleoid | 2.60E-02 |
| 38 | GO:0046658: anchored component of plasma membrane | 3.02E-02 |
| 39 | GO:0005618: cell wall | 3.05E-02 |
| 40 | GO:0000325: plant-type vacuole | 3.78E-02 |
| 41 | GO:0031969: chloroplast membrane | 4.36E-02 |
| 42 | GO:0031902: late endosome membrane | 4.56E-02 |