GO Enrichment Analysis of Co-expressed Genes with
AT1G49410
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 2 | GO:0019918: peptidyl-arginine methylation, to symmetrical-dimethyl arginine | 0.00E+00 |
| 3 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 4 | GO:0006412: translation | 1.53E-68 |
| 5 | GO:0042254: ribosome biogenesis | 6.69E-24 |
| 6 | GO:0000027: ribosomal large subunit assembly | 4.43E-10 |
| 7 | GO:0009735: response to cytokinin | 8.54E-07 |
| 8 | GO:0002181: cytoplasmic translation | 1.27E-06 |
| 9 | GO:0016444: somatic cell DNA recombination | 2.12E-05 |
| 10 | GO:0009793: embryo development ending in seed dormancy | 1.31E-04 |
| 11 | GO:0006626: protein targeting to mitochondrion | 1.40E-04 |
| 12 | GO:0010220: positive regulation of vernalization response | 1.85E-04 |
| 13 | GO:0006334: nucleosome assembly | 2.78E-04 |
| 14 | GO:0007005: mitochondrion organization | 3.05E-04 |
| 15 | GO:1902626: assembly of large subunit precursor of preribosome | 3.11E-04 |
| 16 | GO:0070301: cellular response to hydrogen peroxide | 4.49E-04 |
| 17 | GO:0051085: chaperone mediated protein folding requiring cofactor | 4.49E-04 |
| 18 | GO:0006241: CTP biosynthetic process | 4.49E-04 |
| 19 | GO:0006165: nucleoside diphosphate phosphorylation | 4.49E-04 |
| 20 | GO:0006228: UTP biosynthetic process | 4.49E-04 |
| 21 | GO:0006986: response to unfolded protein | 4.49E-04 |
| 22 | GO:0006183: GTP biosynthetic process | 5.98E-04 |
| 23 | GO:0071493: cellular response to UV-B | 7.57E-04 |
| 24 | GO:0009955: adaxial/abaxial pattern specification | 1.10E-03 |
| 25 | GO:0000724: double-strand break repair via homologous recombination | 1.23E-03 |
| 26 | GO:0042255: ribosome assembly | 1.48E-03 |
| 27 | GO:0008283: cell proliferation | 1.65E-03 |
| 28 | GO:0001558: regulation of cell growth | 1.69E-03 |
| 29 | GO:0000387: spliceosomal snRNP assembly | 2.14E-03 |
| 30 | GO:0006364: rRNA processing | 2.21E-03 |
| 31 | GO:0006820: anion transport | 2.86E-03 |
| 32 | GO:0010102: lateral root morphogenesis | 3.12E-03 |
| 33 | GO:0010229: inflorescence development | 3.12E-03 |
| 34 | GO:0048467: gynoecium development | 3.38E-03 |
| 35 | GO:0030150: protein import into mitochondrial matrix | 4.23E-03 |
| 36 | GO:0051302: regulation of cell division | 4.52E-03 |
| 37 | GO:0046686: response to cadmium ion | 5.42E-03 |
| 38 | GO:0000413: protein peptidyl-prolyl isomerization | 6.44E-03 |
| 39 | GO:0009791: post-embryonic development | 7.49E-03 |
| 40 | GO:0032502: developmental process | 8.22E-03 |
| 41 | GO:0016049: cell growth | 1.18E-02 |
| 42 | GO:0010311: lateral root formation | 1.27E-02 |
| 43 | GO:0006811: ion transport | 1.31E-02 |
| 44 | GO:0048527: lateral root development | 1.36E-02 |
| 45 | GO:0010043: response to zinc ion | 1.36E-02 |
| 46 | GO:0009644: response to high light intensity | 1.83E-02 |
| 47 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 1.98E-02 |
| 48 | GO:0009734: auxin-activated signaling pathway | 2.15E-02 |
| 49 | GO:0009909: regulation of flower development | 2.30E-02 |
| 50 | GO:0009620: response to fungus | 2.58E-02 |
| 51 | GO:0000398: mRNA splicing, via spliceosome | 3.05E-02 |
| 52 | GO:0006457: protein folding | 3.50E-02 |
| 53 | GO:0006413: translational initiation | 3.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016018: cyclosporin A binding | 0.00E+00 |
| 2 | GO:0003735: structural constituent of ribosome | 9.32E-77 |
| 3 | GO:0003729: mRNA binding | 1.76E-20 |
| 4 | GO:0019843: rRNA binding | 3.66E-05 |
| 5 | GO:0003723: RNA binding | 3.74E-05 |
| 6 | GO:0008469: histone-arginine N-methyltransferase activity | 3.11E-04 |
| 7 | GO:0008276: protein methyltransferase activity | 4.49E-04 |
| 8 | GO:0004550: nucleoside diphosphate kinase activity | 4.49E-04 |
| 9 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.03E-03 |
| 10 | GO:0008235: metalloexopeptidase activity | 1.29E-03 |
| 11 | GO:0042393: histone binding | 1.46E-03 |
| 12 | GO:0015288: porin activity | 1.48E-03 |
| 13 | GO:0008308: voltage-gated anion channel activity | 1.69E-03 |
| 14 | GO:0001055: RNA polymerase II activity | 2.14E-03 |
| 15 | GO:0001054: RNA polymerase I activity | 2.61E-03 |
| 16 | GO:0001056: RNA polymerase III activity | 2.86E-03 |
| 17 | GO:0015266: protein channel activity | 3.12E-03 |
| 18 | GO:0051087: chaperone binding | 4.52E-03 |
| 19 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.93E-02 |
| 20 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.14E-02 |
| 21 | GO:0051082: unfolded protein binding | 2.75E-02 |
| 22 | GO:0008026: ATP-dependent helicase activity | 2.87E-02 |
| 23 | GO:0005507: copper ion binding | 3.85E-02 |
| 24 | GO:0003743: translation initiation factor activity | 4.53E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043186: P granule | 0.00E+00 |
| 2 | GO:0022625: cytosolic large ribosomal subunit | 1.95E-54 |
| 3 | GO:0005840: ribosome | 8.72E-49 |
| 4 | GO:0022626: cytosolic ribosome | 3.05E-46 |
| 5 | GO:0005730: nucleolus | 4.69E-31 |
| 6 | GO:0022627: cytosolic small ribosomal subunit | 1.65E-28 |
| 7 | GO:0005737: cytoplasm | 1.98E-21 |
| 8 | GO:0009506: plasmodesma | 9.90E-18 |
| 9 | GO:0005829: cytosol | 1.04E-16 |
| 10 | GO:0015934: large ribosomal subunit | 1.11E-15 |
| 11 | GO:0016020: membrane | 1.48E-10 |
| 12 | GO:0005773: vacuole | 1.13E-07 |
| 13 | GO:0005774: vacuolar membrane | 1.28E-07 |
| 14 | GO:0005618: cell wall | 1.08E-04 |
| 15 | GO:0015935: small ribosomal subunit | 2.78E-04 |
| 16 | GO:0005886: plasma membrane | 3.01E-04 |
| 17 | GO:0034719: SMN-Sm protein complex | 3.11E-04 |
| 18 | GO:0005682: U5 snRNP | 5.98E-04 |
| 19 | GO:0097526: spliceosomal tri-snRNP complex | 7.57E-04 |
| 20 | GO:0005687: U4 snRNP | 7.57E-04 |
| 21 | GO:0005689: U12-type spliceosomal complex | 1.10E-03 |
| 22 | GO:0071004: U2-type prespliceosome | 1.48E-03 |
| 23 | GO:0005742: mitochondrial outer membrane translocase complex | 1.69E-03 |
| 24 | GO:0046930: pore complex | 1.69E-03 |
| 25 | GO:0005736: DNA-directed RNA polymerase I complex | 1.91E-03 |
| 26 | GO:0005685: U1 snRNP | 1.91E-03 |
| 27 | GO:0005763: mitochondrial small ribosomal subunit | 1.91E-03 |
| 28 | GO:0005666: DNA-directed RNA polymerase III complex | 2.14E-03 |
| 29 | GO:0071011: precatalytic spliceosome | 2.14E-03 |
| 30 | GO:0005622: intracellular | 2.27E-03 |
| 31 | GO:0005686: U2 snRNP | 2.37E-03 |
| 32 | GO:0000418: DNA-directed RNA polymerase IV complex | 2.37E-03 |
| 33 | GO:0071013: catalytic step 2 spliceosome | 2.61E-03 |
| 34 | GO:0005665: DNA-directed RNA polymerase II, core complex | 2.86E-03 |
| 35 | GO:0019013: viral nucleocapsid | 3.12E-03 |
| 36 | GO:0005758: mitochondrial intermembrane space | 4.23E-03 |
| 37 | GO:0005741: mitochondrial outer membrane | 4.82E-03 |
| 38 | GO:0030529: intracellular ribonucleoprotein complex | 1.02E-02 |
| 39 | GO:0005743: mitochondrial inner membrane | 1.42E-02 |
| 40 | GO:0005681: spliceosomal complex | 2.41E-02 |
| 41 | GO:0005747: mitochondrial respiratory chain complex I | 2.47E-02 |
| 42 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.93E-02 |
| 43 | GO:0005759: mitochondrial matrix | 3.80E-02 |