Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G49050

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
2GO:0010793: regulation of mRNA export from nucleus0.00E+00
3GO:0010499: proteasomal ubiquitin-independent protein catabolic process0.00E+00
4GO:0072660: maintenance of protein location in plasma membrane0.00E+00
5GO:0071327: cellular response to trehalose stimulus0.00E+00
6GO:0000169: activation of MAPK activity involved in osmosensory signaling pathway0.00E+00
7GO:0045792: negative regulation of cell size0.00E+00
8GO:1900367: positive regulation of defense response to insect0.00E+00
9GO:0006468: protein phosphorylation2.86E-13
10GO:0006952: defense response3.16E-08
11GO:0031348: negative regulation of defense response2.94E-07
12GO:0010200: response to chitin4.79E-07
13GO:0080142: regulation of salicylic acid biosynthetic process5.80E-07
14GO:0007166: cell surface receptor signaling pathway6.63E-07
15GO:0010942: positive regulation of cell death2.52E-06
16GO:0010618: aerenchyma formation5.13E-06
17GO:0009816: defense response to bacterium, incompatible interaction5.17E-06
18GO:0042742: defense response to bacterium8.65E-06
19GO:0009626: plant-type hypersensitive response8.79E-06
20GO:0048281: inflorescence morphogenesis1.82E-05
21GO:0048194: Golgi vesicle budding4.01E-05
22GO:2000038: regulation of stomatal complex development7.15E-05
23GO:0060548: negative regulation of cell death7.15E-05
24GO:0009617: response to bacterium8.51E-05
25GO:0009627: systemic acquired resistance9.72E-05
26GO:0070588: calcium ion transmembrane transport1.02E-04
27GO:2000037: regulation of stomatal complex patterning2.20E-04
28GO:0010310: regulation of hydrogen peroxide metabolic process2.20E-04
29GO:0070370: cellular heat acclimation2.86E-04
30GO:1901183: positive regulation of camalexin biosynthetic process3.37E-04
31GO:0071366: cellular response to indolebutyric acid stimulus3.37E-04
32GO:0080136: priming of cellular response to stress3.37E-04
33GO:0006680: glucosylceramide catabolic process3.37E-04
34GO:0060862: negative regulation of floral organ abscission3.37E-04
35GO:0006643: membrane lipid metabolic process3.37E-04
36GO:0006805: xenobiotic metabolic process3.37E-04
37GO:0051245: negative regulation of cellular defense response3.37E-04
38GO:0006886: intracellular protein transport4.04E-04
39GO:0010120: camalexin biosynthetic process4.41E-04
40GO:0043562: cellular response to nitrogen levels4.41E-04
41GO:2000031: regulation of salicylic acid mediated signaling pathway4.41E-04
42GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway6.25E-04
43GO:0006904: vesicle docking involved in exocytosis6.69E-04
44GO:0009620: response to fungus7.21E-04
45GO:0007584: response to nutrient7.34E-04
46GO:0019483: beta-alanine biosynthetic process7.34E-04
47GO:1902000: homogentisate catabolic process7.34E-04
48GO:0031349: positive regulation of defense response7.34E-04
49GO:0051252: regulation of RNA metabolic process7.34E-04
50GO:0051258: protein polymerization7.34E-04
51GO:0002221: pattern recognition receptor signaling pathway7.34E-04
52GO:0015914: phospholipid transport7.34E-04
53GO:0080151: positive regulation of salicylic acid mediated signaling pathway7.34E-04
54GO:0080185: effector dependent induction by symbiont of host immune response7.34E-04
55GO:0080181: lateral root branching7.34E-04
56GO:0050684: regulation of mRNA processing7.34E-04
57GO:0006212: uracil catabolic process7.34E-04
58GO:0052544: defense response by callose deposition in cell wall8.40E-04
59GO:0006970: response to osmotic stress9.27E-04
60GO:0000266: mitochondrial fission9.59E-04
61GO:0009817: defense response to fungus, incompatible interaction1.08E-03
62GO:0010102: lateral root morphogenesis1.08E-03
63GO:0010229: inflorescence development1.08E-03
64GO:0032784: regulation of DNA-templated transcription, elongation1.19E-03
65GO:1900140: regulation of seedling development1.19E-03
66GO:0061158: 3'-UTR-mediated mRNA destabilization1.19E-03
67GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.19E-03
68GO:0055074: calcium ion homeostasis1.19E-03
69GO:0051176: positive regulation of sulfur metabolic process1.19E-03
70GO:0072661: protein targeting to plasma membrane1.19E-03
71GO:0006517: protein deglycosylation1.19E-03
72GO:0009072: aromatic amino acid family metabolic process1.19E-03
73GO:0015695: organic cation transport1.19E-03
74GO:0042344: indole glucosinolate catabolic process1.19E-03
75GO:0034605: cellular response to heat1.22E-03
76GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.26E-03
77GO:0015031: protein transport1.29E-03
78GO:0046777: protein autophosphorylation1.33E-03
79GO:0009399: nitrogen fixation1.71E-03
80GO:0015696: ammonium transport1.71E-03
81GO:0072583: clathrin-dependent endocytosis1.71E-03
82GO:0071323: cellular response to chitin1.71E-03
83GO:0010148: transpiration1.71E-03
84GO:0001676: long-chain fatty acid metabolic process1.71E-03
85GO:0002679: respiratory burst involved in defense response1.71E-03
86GO:0000187: activation of MAPK activity1.71E-03
87GO:2001289: lipid X metabolic process1.71E-03
88GO:0070301: cellular response to hydrogen peroxide1.71E-03
89GO:0006612: protein targeting to membrane1.71E-03
90GO:0006887: exocytosis1.81E-03
91GO:2000022: regulation of jasmonic acid mediated signaling pathway2.23E-03
92GO:0009814: defense response, incompatible interaction2.23E-03
93GO:0010508: positive regulation of autophagy2.30E-03
94GO:0006542: glutamine biosynthetic process2.30E-03
95GO:0048830: adventitious root development2.30E-03
96GO:0010107: potassium ion import2.30E-03
97GO:0072488: ammonium transmembrane transport2.30E-03
98GO:0010363: regulation of plant-type hypersensitive response2.30E-03
99GO:0006979: response to oxidative stress2.38E-03
100GO:0010227: floral organ abscission2.43E-03
101GO:0030041: actin filament polymerization2.93E-03
102GO:0046283: anthocyanin-containing compound metabolic process2.93E-03
103GO:0031365: N-terminal protein amino acid modification2.93E-03
104GO:0009229: thiamine diphosphate biosynthetic process2.93E-03
105GO:0010225: response to UV-C2.93E-03
106GO:0000304: response to singlet oxygen2.93E-03
107GO:0009697: salicylic acid biosynthetic process2.93E-03
108GO:0061025: membrane fusion3.59E-03
109GO:1900425: negative regulation of defense response to bacterium3.63E-03
110GO:0009759: indole glucosinolate biosynthetic process3.63E-03
111GO:0009228: thiamine biosynthetic process3.63E-03
112GO:0015691: cadmium ion transport3.63E-03
113GO:0006751: glutathione catabolic process3.63E-03
114GO:0050832: defense response to fungus3.74E-03
115GO:0006623: protein targeting to vacuole3.85E-03
116GO:0010183: pollen tube guidance3.85E-03
117GO:0009612: response to mechanical stimulus4.37E-03
118GO:0010555: response to mannitol4.37E-03
119GO:2000067: regulation of root morphogenesis4.37E-03
120GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response4.37E-03
121GO:0000911: cytokinesis by cell plate formation4.37E-03
122GO:0009737: response to abscisic acid4.44E-03
123GO:0010044: response to aluminum ion5.15E-03
124GO:0046470: phosphatidylcholine metabolic process5.15E-03
125GO:0043090: amino acid import5.15E-03
126GO:0071446: cellular response to salicylic acid stimulus5.15E-03
127GO:0016192: vesicle-mediated transport5.52E-03
128GO:0001666: response to hypoxia5.96E-03
129GO:0009615: response to virus5.96E-03
130GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.99E-03
131GO:0009819: drought recovery5.99E-03
132GO:0030162: regulation of proteolysis5.99E-03
133GO:0006491: N-glycan processing5.99E-03
134GO:1900150: regulation of defense response to fungus5.99E-03
135GO:0016559: peroxisome fission5.99E-03
136GO:0007186: G-protein coupled receptor signaling pathway6.87E-03
137GO:0006367: transcription initiation from RNA polymerase II promoter6.87E-03
138GO:0010204: defense response signaling pathway, resistance gene-independent6.87E-03
139GO:0006002: fructose 6-phosphate metabolic process6.87E-03
140GO:0006075: (1->3)-beta-D-glucan biosynthetic process6.87E-03
141GO:0010112: regulation of systemic acquired resistance7.79E-03
142GO:0008219: cell death7.79E-03
143GO:0046685: response to arsenic-containing substance7.79E-03
144GO:0009821: alkaloid biosynthetic process7.79E-03
145GO:0051865: protein autoubiquitination7.79E-03
146GO:0010311: lateral root formation8.19E-03
147GO:0009407: toxin catabolic process8.59E-03
148GO:0048268: clathrin coat assembly8.75E-03
149GO:1900426: positive regulation of defense response to bacterium8.75E-03
150GO:0010119: regulation of stomatal movement9.01E-03
151GO:0009751: response to salicylic acid9.05E-03
152GO:0010150: leaf senescence9.23E-03
153GO:0006629: lipid metabolic process9.25E-03
154GO:0006995: cellular response to nitrogen starvation9.76E-03
155GO:0043069: negative regulation of programmed cell death9.76E-03
156GO:0009641: shade avoidance9.76E-03
157GO:0009682: induced systemic resistance1.08E-02
158GO:0009750: response to fructose1.08E-02
159GO:0030148: sphingolipid biosynthetic process1.08E-02
160GO:0009684: indoleacetic acid biosynthetic process1.08E-02
161GO:0010468: regulation of gene expression1.16E-02
162GO:0006897: endocytosis1.18E-02
163GO:0006631: fatty acid metabolic process1.18E-02
164GO:0002213: defense response to insect1.19E-02
165GO:0010105: negative regulation of ethylene-activated signaling pathway1.19E-02
166GO:0051707: response to other organism1.28E-02
167GO:0006807: nitrogen compound metabolic process1.30E-02
168GO:0006829: zinc II ion transport1.30E-02
169GO:0002237: response to molecule of bacterial origin1.42E-02
170GO:0009636: response to toxic substance1.44E-02
171GO:0010053: root epidermal cell differentiation1.54E-02
172GO:0042343: indole glucosinolate metabolic process1.54E-02
173GO:0000162: tryptophan biosynthetic process1.66E-02
174GO:0080147: root hair cell development1.79E-02
175GO:0009863: salicylic acid mediated signaling pathway1.79E-02
176GO:0016575: histone deacetylation1.92E-02
177GO:0006874: cellular calcium ion homeostasis1.92E-02
178GO:0048278: vesicle docking2.05E-02
179GO:0016998: cell wall macromolecule catabolic process2.05E-02
180GO:0098542: defense response to other organism2.05E-02
181GO:0048367: shoot system development2.11E-02
182GO:0080167: response to karrikin2.11E-02
183GO:0007005: mitochondrion organization2.19E-02
184GO:0071456: cellular response to hypoxia2.19E-02
185GO:0016226: iron-sulfur cluster assembly2.19E-02
186GO:0009625: response to insect2.33E-02
187GO:0009306: protein secretion2.47E-02
188GO:0010091: trichome branching2.47E-02
189GO:0009742: brassinosteroid mediated signaling pathway2.61E-02
190GO:0042147: retrograde transport, endosome to Golgi2.62E-02
191GO:0042391: regulation of membrane potential2.77E-02
192GO:0000413: protein peptidyl-prolyl isomerization2.77E-02
193GO:0010118: stomatal movement2.77E-02
194GO:0010197: polar nucleus fusion2.92E-02
195GO:0046323: glucose import2.92E-02
196GO:0008360: regulation of cell shape2.92E-02
197GO:0048544: recognition of pollen3.07E-02
198GO:0009749: response to glucose3.23E-02
199GO:0009058: biosynthetic process3.25E-02
200GO:0000302: response to reactive oxygen species3.39E-02
201GO:0006891: intra-Golgi vesicle-mediated transport3.39E-02
202GO:0010193: response to ozone3.39E-02
203GO:0009790: embryo development3.59E-02
204GO:0051607: defense response to virus4.23E-02
205GO:0000910: cytokinesis4.23E-02
206GO:0045490: pectin catabolic process4.24E-02
207GO:0009607: response to biotic stimulus4.58E-02
208GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.74E-02
209GO:0006906: vesicle fusion4.76E-02
210GO:0042128: nitrate assimilation4.76E-02
211GO:0006470: protein dephosphorylation4.84E-02
212GO:0048573: photoperiodism, flowering4.94E-02
RankGO TermAdjusted P value
1GO:0015591: D-ribose transmembrane transporter activity0.00E+00
2GO:0050334: thiaminase activity0.00E+00
3GO:0015148: D-xylose transmembrane transporter activity0.00E+00
4GO:0015575: mannitol transmembrane transporter activity0.00E+00
5GO:0016504: peptidase activator activity0.00E+00
6GO:0005365: myo-inositol transmembrane transporter activity0.00E+00
7GO:0016034: maleylacetoacetate isomerase activity0.00E+00
8GO:0015576: sorbitol transmembrane transporter activity0.00E+00
9GO:0015370: solute:sodium symporter activity0.00E+00
10GO:0003837: beta-ureidopropionase activity0.00E+00
11GO:0070577: lysine-acetylated histone binding0.00E+00
12GO:0016301: kinase activity9.36E-15
13GO:0005524: ATP binding7.88E-14
14GO:0004674: protein serine/threonine kinase activity1.95E-06
15GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.26E-06
16GO:0004012: phospholipid-translocating ATPase activity4.37E-06
17GO:0004714: transmembrane receptor protein tyrosine kinase activity1.05E-05
18GO:0005516: calmodulin binding1.51E-05
19GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism7.09E-05
20GO:0005388: calcium-transporting ATPase activity7.09E-05
21GO:0004806: triglyceride lipase activity1.07E-04
22GO:0004672: protein kinase activity1.81E-04
23GO:0102391: decanoate--CoA ligase activity2.20E-04
24GO:0005515: protein binding2.82E-04
25GO:0004467: long-chain fatty acid-CoA ligase activity2.86E-04
26GO:0004348: glucosylceramidase activity3.37E-04
27GO:0015168: glycerol transmembrane transporter activity3.37E-04
28GO:0032050: clathrin heavy chain binding3.37E-04
29GO:1901149: salicylic acid binding3.37E-04
30GO:0015085: calcium ion transmembrane transporter activity3.37E-04
31GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity3.37E-04
32GO:0005509: calcium ion binding6.02E-04
33GO:0004713: protein tyrosine kinase activity7.29E-04
34GO:0045140: inositol phosphoceramide synthase activity7.34E-04
35GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity7.34E-04
36GO:0008428: ribonuclease inhibitor activity7.34E-04
37GO:0003840: gamma-glutamyltransferase activity1.19E-03
38GO:0036374: glutathione hydrolase activity1.19E-03
39GO:0004557: alpha-galactosidase activity1.19E-03
40GO:0031683: G-protein beta/gamma-subunit complex binding1.19E-03
41GO:0052692: raffinose alpha-galactosidase activity1.19E-03
42GO:0001664: G-protein coupled receptor binding1.19E-03
43GO:0008061: chitin binding1.36E-03
44GO:0015086: cadmium ion transmembrane transporter activity1.71E-03
45GO:0005354: galactose transmembrane transporter activity1.71E-03
46GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity1.71E-03
47GO:0004707: MAP kinase activity2.04E-03
48GO:0033612: receptor serine/threonine kinase binding2.04E-03
49GO:0019199: transmembrane receptor protein kinase activity2.30E-03
50GO:0043495: protein anchor2.30E-03
51GO:0015204: urea transmembrane transporter activity2.30E-03
52GO:0070628: proteasome binding2.30E-03
53GO:0008948: oxaloacetate decarboxylase activity2.93E-03
54GO:0005546: phosphatidylinositol-4,5-bisphosphate binding2.93E-03
55GO:0004356: glutamate-ammonia ligase activity2.93E-03
56GO:0015145: monosaccharide transmembrane transporter activity2.93E-03
57GO:0016298: lipase activity3.06E-03
58GO:0008519: ammonium transmembrane transporter activity3.63E-03
59GO:0003950: NAD+ ADP-ribosyltransferase activity4.37E-03
60GO:0004656: procollagen-proline 4-dioxygenase activity4.37E-03
61GO:0003872: 6-phosphofructokinase activity5.15E-03
62GO:0008320: protein transmembrane transporter activity5.15E-03
63GO:0008235: metalloexopeptidase activity5.15E-03
64GO:0004708: MAP kinase kinase activity5.99E-03
65GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen6.33E-03
66GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity6.87E-03
67GO:0003843: 1,3-beta-D-glucan synthase activity6.87E-03
68GO:0004630: phospholipase D activity6.87E-03
69GO:0005267: potassium channel activity6.87E-03
70GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)6.87E-03
71GO:0005506: iron ion binding7.06E-03
72GO:0008565: protein transporter activity7.69E-03
73GO:0016844: strictosidine synthase activity8.75E-03
74GO:0005545: 1-phosphatidylinositol binding9.76E-03
75GO:0008047: enzyme activator activity9.76E-03
76GO:0004177: aminopeptidase activity1.08E-02
77GO:0019825: oxygen binding1.19E-02
78GO:0004364: glutathione transferase activity1.23E-02
79GO:0005484: SNAP receptor activity1.28E-02
80GO:0005262: calcium channel activity1.30E-02
81GO:0015293: symporter activity1.44E-02
82GO:0003712: transcription cofactor activity1.54E-02
83GO:0004970: ionotropic glutamate receptor activity1.54E-02
84GO:0005217: intracellular ligand-gated ion channel activity1.54E-02
85GO:0004190: aspartic-type endopeptidase activity1.54E-02
86GO:0030552: cAMP binding1.54E-02
87GO:0030553: cGMP binding1.54E-02
88GO:0000287: magnesium ion binding1.57E-02
89GO:0031418: L-ascorbic acid binding1.79E-02
90GO:0003954: NADH dehydrogenase activity1.79E-02
91GO:0004407: histone deacetylase activity1.79E-02
92GO:0031625: ubiquitin protein ligase binding1.91E-02
93GO:0008324: cation transmembrane transporter activity1.92E-02
94GO:0005216: ion channel activity1.92E-02
95GO:0003727: single-stranded RNA binding2.47E-02
96GO:0005249: voltage-gated potassium channel activity2.77E-02
97GO:0030551: cyclic nucleotide binding2.77E-02
98GO:0042803: protein homodimerization activity2.81E-02
99GO:0004871: signal transducer activity2.81E-02
100GO:0046873: metal ion transmembrane transporter activity2.92E-02
101GO:0030276: clathrin binding2.92E-02
102GO:0001085: RNA polymerase II transcription factor binding2.92E-02
103GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.92E-02
104GO:0005355: glucose transmembrane transporter activity3.07E-02
105GO:0030246: carbohydrate binding3.39E-02
106GO:0015144: carbohydrate transmembrane transporter activity3.68E-02
107GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity4.05E-02
108GO:0005351: sugar:proton symporter activity4.15E-02
109GO:0020037: heme binding4.63E-02
110GO:0009931: calcium-dependent protein serine/threonine kinase activity4.76E-02
111GO:0030247: polysaccharide binding4.94E-02
112GO:0004683: calmodulin-dependent protein kinase activity4.94E-02
113GO:0016798: hydrolase activity, acting on glycosyl bonds4.94E-02
RankGO TermAdjusted P value
1GO:0005674: transcription factor TFIIF complex0.00E+00
2GO:0005886: plasma membrane1.56E-25
3GO:0016021: integral component of membrane3.08E-10
4GO:0070062: extracellular exosome4.01E-05
5GO:0005887: integral component of plasma membrane5.05E-05
6GO:0031902: late endosome membrane2.62E-04
7GO:0005911: cell-cell junction3.37E-04
8GO:0005802: trans-Golgi network4.11E-04
9GO:0009504: cell plate4.44E-04
10GO:0005789: endoplasmic reticulum membrane6.75E-04
11GO:0017119: Golgi transport complex7.29E-04
12GO:0030125: clathrin vesicle coat7.29E-04
13GO:0031304: intrinsic component of mitochondrial inner membrane7.34E-04
14GO:0030658: transport vesicle membrane1.71E-03
15GO:0005905: clathrin-coated pit2.04E-03
16GO:0005945: 6-phosphofructokinase complex2.93E-03
17GO:0030904: retromer complex3.63E-03
18GO:0019898: extrinsic component of membrane3.85E-03
19GO:0009506: plasmodesma4.29E-03
20GO:0016363: nuclear matrix4.37E-03
21GO:0000145: exocyst4.40E-03
22GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane5.15E-03
23GO:0030131: clathrin adaptor complex5.99E-03
24GO:0005783: endoplasmic reticulum6.32E-03
25GO:0000148: 1,3-beta-D-glucan synthase complex6.87E-03
26GO:0016020: membrane7.83E-03
27GO:0030665: clathrin-coated vesicle membrane8.75E-03
28GO:0005794: Golgi apparatus1.16E-02
29GO:0005795: Golgi stack1.54E-02
30GO:0005773: vacuole1.60E-02
31GO:0005741: mitochondrial outer membrane2.05E-02
32GO:0005839: proteasome core complex2.05E-02
33GO:0030136: clathrin-coated vesicle2.62E-02
34GO:0009524: phragmoplast3.25E-02
35GO:0000139: Golgi membrane3.61E-02
36GO:0071944: cell periphery3.72E-02
37GO:0032580: Golgi cisterna membrane3.88E-02
38GO:0005778: peroxisomal membrane4.05E-02
39GO:0005788: endoplasmic reticulum lumen4.58E-02
40GO:0005667: transcription factor complex4.76E-02
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Gene type



Gene DE type