Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G48330

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042493: response to drug0.00E+00
2GO:0002184: cytoplasmic translational termination0.00E+00
3GO:0071242: cellular response to ammonium ion0.00E+00
4GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process0.00E+00
5GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
6GO:0006114: glycerol biosynthetic process0.00E+00
7GO:0015805: S-adenosyl-L-methionine transport0.00E+00
8GO:0046322: negative regulation of fatty acid oxidation0.00E+00
9GO:0010411: xyloglucan metabolic process6.09E-06
10GO:0006633: fatty acid biosynthetic process3.80E-05
11GO:0010306: rhamnogalacturonan II biosynthetic process3.81E-05
12GO:0016123: xanthophyll biosynthetic process1.07E-04
13GO:0042546: cell wall biogenesis2.97E-04
14GO:0043266: regulation of potassium ion transport3.27E-04
15GO:0031338: regulation of vesicle fusion3.27E-04
16GO:2000021: regulation of ion homeostasis3.27E-04
17GO:0060627: regulation of vesicle-mediated transport3.27E-04
18GO:0005980: glycogen catabolic process3.27E-04
19GO:0019252: starch biosynthetic process4.19E-04
20GO:0032544: plastid translation4.21E-04
21GO:0045717: negative regulation of fatty acid biosynthetic process7.13E-04
22GO:0010289: homogalacturonan biosynthetic process7.13E-04
23GO:0010275: NAD(P)H dehydrogenase complex assembly7.13E-04
24GO:0046741: transport of virus in host, tissue to tissue7.13E-04
25GO:0019388: galactose catabolic process7.13E-04
26GO:0019684: photosynthesis, light reaction8.05E-04
27GO:0006415: translational termination8.05E-04
28GO:0015995: chlorophyll biosynthetic process8.99E-04
29GO:1901562: response to paraquat1.16E-03
30GO:0045493: xylan catabolic process1.16E-03
31GO:0090630: activation of GTPase activity1.16E-03
32GO:2001295: malonyl-CoA biosynthetic process1.16E-03
33GO:0090506: axillary shoot meristem initiation1.16E-03
34GO:0006518: peptide metabolic process1.16E-03
35GO:0010207: photosystem II assembly1.17E-03
36GO:0016051: carbohydrate biosynthetic process1.37E-03
37GO:0051017: actin filament bundle assembly1.61E-03
38GO:0009590: detection of gravity1.66E-03
39GO:0010371: regulation of gibberellin biosynthetic process1.66E-03
40GO:0051639: actin filament network formation1.66E-03
41GO:0009152: purine ribonucleotide biosynthetic process1.66E-03
42GO:0046653: tetrahydrofolate metabolic process1.66E-03
43GO:0009052: pentose-phosphate shunt, non-oxidative branch1.66E-03
44GO:0009650: UV protection1.66E-03
45GO:0009226: nucleotide-sugar biosynthetic process1.66E-03
46GO:0006424: glutamyl-tRNA aminoacylation1.66E-03
47GO:0007017: microtubule-based process1.78E-03
48GO:0016998: cell wall macromolecule catabolic process1.95E-03
49GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway2.23E-03
50GO:0051764: actin crosslink formation2.23E-03
51GO:0009765: photosynthesis, light harvesting2.23E-03
52GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.33E-03
53GO:0016117: carotenoid biosynthetic process2.74E-03
54GO:0032543: mitochondrial translation2.84E-03
55GO:0009107: lipoate biosynthetic process2.84E-03
56GO:0000304: response to singlet oxygen2.84E-03
57GO:0016120: carotene biosynthetic process2.84E-03
58GO:0045487: gibberellin catabolic process2.84E-03
59GO:0000413: protein peptidyl-prolyl isomerization2.96E-03
60GO:0048868: pollen tube development3.19E-03
61GO:0009658: chloroplast organization3.44E-03
62GO:0006014: D-ribose metabolic process3.51E-03
63GO:0010405: arabinogalactan protein metabolic process3.51E-03
64GO:0010304: PSII associated light-harvesting complex II catabolic process3.51E-03
65GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway3.51E-03
66GO:0006655: phosphatidylglycerol biosynthetic process3.51E-03
67GO:0018258: protein O-linked glycosylation via hydroxyproline3.51E-03
68GO:0006796: phosphate-containing compound metabolic process3.51E-03
69GO:0071554: cell wall organization or biogenesis3.94E-03
70GO:0010067: procambium histogenesis4.23E-03
71GO:2000033: regulation of seed dormancy process4.23E-03
72GO:0009612: response to mechanical stimulus4.23E-03
73GO:0009828: plant-type cell wall loosening4.77E-03
74GO:0009645: response to low light intensity stimulus4.99E-03
75GO:0005975: carbohydrate metabolic process5.25E-03
76GO:0010027: thylakoid membrane organization5.70E-03
77GO:0009704: de-etiolation5.80E-03
78GO:0016559: peroxisome fission5.80E-03
79GO:0005978: glycogen biosynthetic process5.80E-03
80GO:0010439: regulation of glucosinolate biosynthetic process5.80E-03
81GO:0015979: photosynthesis5.84E-03
82GO:0015996: chlorophyll catabolic process6.65E-03
83GO:0009657: plastid organization6.65E-03
84GO:0071555: cell wall organization6.66E-03
85GO:0009817: defense response to fungus, incompatible interaction7.44E-03
86GO:0006754: ATP biosynthetic process7.54E-03
87GO:0010206: photosystem II repair7.54E-03
88GO:0009407: toxin catabolic process8.21E-03
89GO:0005982: starch metabolic process8.48E-03
90GO:0006629: lipid metabolic process8.63E-03
91GO:0043069: negative regulation of programmed cell death9.45E-03
92GO:0006949: syncytium formation9.45E-03
93GO:0010162: seed dormancy process9.45E-03
94GO:0018119: peptidyl-cysteine S-nitrosylation1.05E-02
95GO:0009684: indoleacetic acid biosynthetic process1.05E-02
96GO:0046856: phosphatidylinositol dephosphorylation1.05E-02
97GO:0006820: anion transport1.15E-02
98GO:0016024: CDP-diacylglycerol biosynthetic process1.15E-02
99GO:0006006: glucose metabolic process1.26E-02
100GO:0009767: photosynthetic electron transport chain1.26E-02
101GO:0010223: secondary shoot formation1.37E-02
102GO:0009266: response to temperature stimulus1.37E-02
103GO:0009636: response to toxic substance1.37E-02
104GO:0010020: chloroplast fission1.37E-02
105GO:0009826: unidimensional cell growth1.45E-02
106GO:0071732: cellular response to nitric oxide1.49E-02
107GO:0010030: positive regulation of seed germination1.49E-02
108GO:0009664: plant-type cell wall organization1.54E-02
109GO:0042538: hyperosmotic salinity response1.54E-02
110GO:0010431: seed maturation1.99E-02
111GO:0031408: oxylipin biosynthetic process1.99E-02
112GO:0035428: hexose transmembrane transport2.12E-02
113GO:0009411: response to UV2.25E-02
114GO:0071369: cellular response to ethylene stimulus2.25E-02
115GO:0001944: vasculature development2.25E-02
116GO:0006012: galactose metabolic process2.25E-02
117GO:0009306: protein secretion2.39E-02
118GO:0010089: xylem development2.39E-02
119GO:0009742: brassinosteroid mediated signaling pathway2.49E-02
120GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.53E-02
121GO:0010087: phloem or xylem histogenesis2.68E-02
122GO:0042631: cellular response to water deprivation2.68E-02
123GO:0010182: sugar mediated signaling pathway2.82E-02
124GO:0046323: glucose import2.82E-02
125GO:0016042: lipid catabolic process3.14E-02
126GO:0000302: response to reactive oxygen species3.28E-02
127GO:0019761: glucosinolate biosynthetic process3.44E-02
128GO:1901657: glycosyl compound metabolic process3.60E-02
129GO:0071281: cellular response to iron ion3.60E-02
130GO:0016125: sterol metabolic process3.76E-02
131GO:0045490: pectin catabolic process4.05E-02
132GO:0051607: defense response to virus4.09E-02
133GO:0009615: response to virus4.26E-02
134GO:0016126: sterol biosynthetic process4.26E-02
135GO:0009739: response to gibberellin4.53E-02
136GO:0009627: systemic acquired resistance4.61E-02
137GO:0042128: nitrate assimilation4.61E-02
138GO:0016311: dephosphorylation4.96E-02
RankGO TermAdjusted P value
1GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
2GO:0052751: GDP-mannose hydrolase activity0.00E+00
3GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
4GO:0043136: glycerol-3-phosphatase activity0.00E+00
5GO:0000121: glycerol-1-phosphatase activity0.00E+00
6GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity0.00E+00
7GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
8GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity0.00E+00
9GO:0004496: mevalonate kinase activity0.00E+00
10GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
11GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
12GO:0045435: lycopene epsilon cyclase activity0.00E+00
13GO:0043864: indoleacetamide hydrolase activity0.00E+00
14GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity4.84E-06
15GO:0016762: xyloglucan:xyloglucosyl transferase activity3.56E-05
16GO:0016851: magnesium chelatase activity3.81E-05
17GO:0016149: translation release factor activity, codon specific3.81E-05
18GO:0016798: hydrolase activity, acting on glycosyl bonds9.89E-05
19GO:0051920: peroxiredoxin activity2.10E-04
20GO:0034256: chlorophyll(ide) b reductase activity3.27E-04
21GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity3.27E-04
22GO:0005227: calcium activated cation channel activity3.27E-04
23GO:0008252: nucleotidase activity3.27E-04
24GO:0008184: glycogen phosphorylase activity3.27E-04
25GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity3.27E-04
26GO:0080132: fatty acid alpha-hydroxylase activity3.27E-04
27GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity3.27E-04
28GO:0004645: phosphorylase activity3.27E-04
29GO:0016209: antioxidant activity3.44E-04
30GO:0003747: translation release factor activity5.07E-04
31GO:0033201: alpha-1,4-glucan synthase activity7.13E-04
32GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity7.13E-04
33GO:0030385: ferredoxin:thioredoxin reductase activity7.13E-04
34GO:0004614: phosphoglucomutase activity7.13E-04
35GO:0016788: hydrolase activity, acting on ester bonds7.78E-04
36GO:0004565: beta-galactosidase activity1.04E-03
37GO:0004075: biotin carboxylase activity1.16E-03
38GO:0004751: ribose-5-phosphate isomerase activity1.16E-03
39GO:0030267: glyoxylate reductase (NADP) activity1.16E-03
40GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.16E-03
41GO:0008864: formyltetrahydrofolate deformylase activity1.16E-03
42GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity1.16E-03
43GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity1.16E-03
44GO:0004373: glycogen (starch) synthase activity1.16E-03
45GO:0016992: lipoate synthase activity1.16E-03
46GO:0016491: oxidoreductase activity1.26E-03
47GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity1.66E-03
48GO:0043023: ribosomal large subunit binding1.66E-03
49GO:0004445: inositol-polyphosphate 5-phosphatase activity1.66E-03
50GO:0046556: alpha-L-arabinofuranosidase activity2.23E-03
51GO:0016836: hydro-lyase activity2.23E-03
52GO:0052793: pectin acetylesterase activity2.23E-03
53GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds2.23E-03
54GO:0009011: starch synthase activity2.23E-03
55GO:0009044: xylan 1,4-beta-xylosidase activity2.23E-03
56GO:0003989: acetyl-CoA carboxylase activity2.84E-03
57GO:0008381: mechanically-gated ion channel activity2.84E-03
58GO:0017137: Rab GTPase binding2.84E-03
59GO:0004040: amidase activity2.84E-03
60GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.87E-03
61GO:0008200: ion channel inhibitor activity3.51E-03
62GO:0080030: methyl indole-3-acetate esterase activity3.51E-03
63GO:1990714: hydroxyproline O-galactosyltransferase activity3.51E-03
64GO:0004130: cytochrome-c peroxidase activity3.51E-03
65GO:0004366: glycerol-3-phosphate O-acyltransferase activity3.51E-03
66GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity3.51E-03
67GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity4.23E-03
68GO:0015631: tubulin binding4.23E-03
69GO:0004747: ribokinase activity4.23E-03
70GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity4.23E-03
71GO:0051015: actin filament binding4.49E-03
72GO:0043295: glutathione binding4.99E-03
73GO:0004427: inorganic diphosphatase activity4.99E-03
74GO:0005200: structural constituent of cytoskeleton5.07E-03
75GO:0016413: O-acetyltransferase activity5.38E-03
76GO:0052689: carboxylic ester hydrolase activity5.56E-03
77GO:0004034: aldose 1-epimerase activity5.80E-03
78GO:0004033: aldo-keto reductase (NADP) activity5.80E-03
79GO:0008865: fructokinase activity5.80E-03
80GO:0008236: serine-type peptidase activity7.07E-03
81GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism7.54E-03
82GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity7.54E-03
83GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors7.54E-03
84GO:0004222: metalloendopeptidase activity8.21E-03
85GO:0047617: acyl-CoA hydrolase activity8.48E-03
86GO:0003924: GTPase activity8.63E-03
87GO:0015020: glucuronosyltransferase activity9.45E-03
88GO:0030246: carbohydrate binding9.98E-03
89GO:0047372: acylglycerol lipase activity1.05E-02
90GO:0016787: hydrolase activity1.10E-02
91GO:0008378: galactosyltransferase activity1.15E-02
92GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity1.15E-02
93GO:0004364: glutathione transferase activity1.17E-02
94GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.43E-02
95GO:0004601: peroxidase activity1.52E-02
96GO:0043424: protein histidine kinase binding1.86E-02
97GO:0008324: cation transmembrane transporter activity1.86E-02
98GO:0033612: receptor serine/threonine kinase binding1.99E-02
99GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.12E-02
100GO:0030599: pectinesterase activity2.21E-02
101GO:0030570: pectate lyase activity2.25E-02
102GO:0005102: receptor binding2.53E-02
103GO:0016758: transferase activity, transferring hexosyl groups2.87E-02
104GO:0019843: rRNA binding2.94E-02
105GO:0016853: isomerase activity2.97E-02
106GO:0005355: glucose transmembrane transporter activity2.97E-02
107GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen3.02E-02
108GO:0019901: protein kinase binding3.12E-02
109GO:0016722: oxidoreductase activity, oxidizing metal ions3.92E-02
110GO:0008237: metallopeptidase activity3.92E-02
111GO:0005525: GTP binding4.24E-02
112GO:0008017: microtubule binding4.24E-02
113GO:0051213: dioxygenase activity4.26E-02
114GO:0008375: acetylglucosaminyltransferase activity4.61E-02
115GO:0102483: scopolin beta-glucosidase activity4.78E-02
RankGO TermAdjusted P value
1GO:0005835: fatty acid synthase complex0.00E+00
2GO:0009507: chloroplast6.28E-23
3GO:0009543: chloroplast thylakoid lumen1.99E-10
4GO:0009535: chloroplast thylakoid membrane7.70E-10
5GO:0031977: thylakoid lumen1.72E-09
6GO:0009534: chloroplast thylakoid6.32E-09
7GO:0009570: chloroplast stroma1.49E-08
8GO:0009941: chloroplast envelope3.46E-08
9GO:0005618: cell wall5.77E-08
10GO:0009579: thylakoid5.84E-07
11GO:0048046: apoplast1.06E-06
12GO:0010007: magnesium chelatase complex1.71E-05
13GO:0009505: plant-type cell wall1.89E-05
14GO:0031969: chloroplast membrane2.33E-04
15GO:0009533: chloroplast stromal thylakoid2.73E-04
16GO:0009344: nitrite reductase complex [NAD(P)H]3.27E-04
17GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex3.27E-04
18GO:0015630: microtubule cytoskeleton1.66E-03
19GO:0032432: actin filament bundle1.66E-03
20GO:0009536: plastid3.31E-03
21GO:0005874: microtubule4.53E-03
22GO:0010287: plastoglobule5.39E-03
23GO:0009501: amyloplast5.80E-03
24GO:0009707: chloroplast outer membrane7.44E-03
25GO:0045298: tubulin complex7.54E-03
26GO:0005884: actin filament1.05E-02
27GO:0000311: plastid large ribosomal subunit1.15E-02
28GO:0046658: anchored component of plasma membrane1.25E-02
29GO:0030095: chloroplast photosystem II1.37E-02
30GO:0005576: extracellular region1.54E-02
31GO:0043234: protein complex1.61E-02
32GO:0009654: photosystem II oxygen evolving complex1.86E-02
33GO:0016020: membrane2.02E-02
34GO:0015629: actin cytoskeleton2.25E-02
35GO:0019898: extrinsic component of membrane3.12E-02
36GO:0010319: stromule3.92E-02
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Gene type



Gene DE type