Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G35680

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0099131: ATP hydrolysis coupled ion transmembrane transport0.00E+00
2GO:1901918: negative regulation of exoribonuclease activity0.00E+00
3GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
4GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
5GO:0042493: response to drug0.00E+00
6GO:0033494: ferulate metabolic process0.00E+00
7GO:2000121: regulation of removal of superoxide radicals0.00E+00
8GO:0061635: regulation of protein complex stability0.00E+00
9GO:0006399: tRNA metabolic process0.00E+00
10GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
11GO:0006642: triglyceride mobilization0.00E+00
12GO:0042821: pyridoxal biosynthetic process0.00E+00
13GO:0005996: monosaccharide metabolic process0.00E+00
14GO:0018160: peptidyl-pyrromethane cofactor linkage0.00E+00
15GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
16GO:1902458: positive regulation of stomatal opening0.00E+00
17GO:0034337: RNA folding0.00E+00
18GO:0018023: peptidyl-lysine trimethylation0.00E+00
19GO:0006223: uracil salvage0.00E+00
20GO:0016553: base conversion or substitution editing0.00E+00
21GO:2000505: regulation of energy homeostasis0.00E+00
22GO:0002184: cytoplasmic translational termination0.00E+00
23GO:0042820: vitamin B6 catabolic process0.00E+00
24GO:0015979: photosynthesis3.24E-22
25GO:0015995: chlorophyll biosynthetic process7.79E-21
26GO:0032544: plastid translation2.35E-17
27GO:0009658: chloroplast organization1.19E-12
28GO:0006412: translation1.46E-11
29GO:0009735: response to cytokinin3.98E-11
30GO:0006782: protoporphyrinogen IX biosynthetic process1.64E-09
31GO:0010207: photosystem II assembly1.75E-08
32GO:0010027: thylakoid membrane organization3.70E-08
33GO:0042254: ribosome biogenesis1.08E-07
34GO:0009773: photosynthetic electron transport in photosystem I1.43E-07
35GO:0006783: heme biosynthetic process1.12E-06
36GO:0006779: porphyrin-containing compound biosynthetic process1.89E-06
37GO:0090391: granum assembly2.03E-06
38GO:0009772: photosynthetic electron transport in photosystem II8.12E-06
39GO:0006633: fatty acid biosynthetic process1.63E-05
40GO:0010206: photosystem II repair3.34E-05
41GO:0045038: protein import into chloroplast thylakoid membrane4.91E-05
42GO:0018026: peptidyl-lysine monomethylation7.23E-05
43GO:1903426: regulation of reactive oxygen species biosynthetic process7.23E-05
44GO:0030388: fructose 1,6-bisphosphate metabolic process7.23E-05
45GO:0010275: NAD(P)H dehydrogenase complex assembly7.23E-05
46GO:0019253: reductive pentose-phosphate cycle1.86E-04
47GO:0055114: oxidation-reduction process1.93E-04
48GO:0010196: nonphotochemical quenching2.00E-04
49GO:0006000: fructose metabolic process2.15E-04
50GO:0006518: peptide metabolic process2.15E-04
51GO:0009409: response to cold2.76E-04
52GO:0042255: ribosome assembly2.78E-04
53GO:0032502: developmental process2.81E-04
54GO:0016556: mRNA modification4.17E-04
55GO:0042742: defense response to bacterium4.70E-04
56GO:0019464: glycine decarboxylation via glycine cleavage system6.75E-04
57GO:0006183: GTP biosynthetic process6.75E-04
58GO:0006546: glycine catabolic process6.75E-04
59GO:0018119: peptidyl-cysteine S-nitrosylation8.92E-04
60GO:0000413: protein peptidyl-prolyl isomerization8.96E-04
61GO:0032543: mitochondrial translation9.88E-04
62GO:0016123: xanthophyll biosynthetic process9.88E-04
63GO:0016024: CDP-diacylglycerol biosynthetic process1.06E-03
64GO:0006006: glucose metabolic process1.26E-03
65GO:0006094: gluconeogenesis1.26E-03
66GO:0009767: photosynthetic electron transport chain1.26E-03
67GO:0045454: cell redox homeostasis1.28E-03
68GO:0006655: phosphatidylglycerol biosynthetic process1.36E-03
69GO:0042549: photosystem II stabilization1.36E-03
70GO:0010190: cytochrome b6f complex assembly1.36E-03
71GO:1904966: positive regulation of vitamin E biosynthetic process1.38E-03
72GO:0071370: cellular response to gibberellin stimulus1.38E-03
73GO:0000481: maturation of 5S rRNA1.38E-03
74GO:1904964: positive regulation of phytol biosynthetic process1.38E-03
75GO:0042371: vitamin K biosynthetic process1.38E-03
76GO:0006438: valyl-tRNA aminoacylation1.38E-03
77GO:0046520: sphingoid biosynthetic process1.38E-03
78GO:0000476: maturation of 4.5S rRNA1.38E-03
79GO:0009443: pyridoxal 5'-phosphate salvage1.38E-03
80GO:0000967: rRNA 5'-end processing1.38E-03
81GO:0046166: glyceraldehyde-3-phosphate biosynthetic process1.38E-03
82GO:0071588: hydrogen peroxide mediated signaling pathway1.38E-03
83GO:0010729: positive regulation of hydrogen peroxide biosynthetic process1.38E-03
84GO:0043489: RNA stabilization1.38E-03
85GO:0006434: seryl-tRNA aminoacylation1.38E-03
86GO:0060627: regulation of vesicle-mediated transport1.38E-03
87GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process1.38E-03
88GO:0010019: chloroplast-nucleus signaling pathway1.81E-03
89GO:1901259: chloroplast rRNA processing1.81E-03
90GO:0042372: phylloquinone biosynthetic process1.81E-03
91GO:0006636: unsaturated fatty acid biosynthetic process1.98E-03
92GO:0009645: response to low light intensity stimulus2.33E-03
93GO:2000070: regulation of response to water deprivation2.91E-03
94GO:0006353: DNA-templated transcription, termination2.91E-03
95GO:0048564: photosystem I assembly2.91E-03
96GO:0046741: transport of virus in host, tissue to tissue3.06E-03
97GO:1902326: positive regulation of chlorophyll biosynthetic process3.06E-03
98GO:0080183: response to photooxidative stress3.06E-03
99GO:0006729: tetrahydrobiopterin biosynthetic process3.06E-03
100GO:0034755: iron ion transmembrane transport3.06E-03
101GO:0006521: regulation of cellular amino acid metabolic process3.06E-03
102GO:0019388: galactose catabolic process3.06E-03
103GO:0034470: ncRNA processing3.06E-03
104GO:0043039: tRNA aminoacylation3.06E-03
105GO:0010411: xyloglucan metabolic process3.21E-03
106GO:0009657: plastid organization3.58E-03
107GO:0006002: fructose 6-phosphate metabolic process3.58E-03
108GO:0009831: plant-type cell wall modification involved in multidimensional cell growth3.69E-03
109GO:0018298: protein-chromophore linkage3.77E-03
110GO:0009306: protein secretion4.11E-03
111GO:0009793: embryo development ending in seed dormancy4.80E-03
112GO:0080022: primary root development5.06E-03
113GO:0045493: xylan catabolic process5.11E-03
114GO:2001295: malonyl-CoA biosynthetic process5.11E-03
115GO:0032504: multicellular organism reproduction5.11E-03
116GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition5.11E-03
117GO:0015840: urea transport5.11E-03
118GO:0006954: inflammatory response5.11E-03
119GO:0019563: glycerol catabolic process5.11E-03
120GO:1900865: chloroplast RNA modification5.12E-03
121GO:0010205: photoinhibition5.12E-03
122GO:0019684: photosynthesis, light reaction6.98E-03
123GO:0009073: aromatic amino acid family biosynthetic process6.98E-03
124GO:0034059: response to anoxia7.50E-03
125GO:0009590: detection of gravity7.50E-03
126GO:0050482: arachidonic acid secretion7.50E-03
127GO:0006241: CTP biosynthetic process7.50E-03
128GO:0080170: hydrogen peroxide transmembrane transport7.50E-03
129GO:0055070: copper ion homeostasis7.50E-03
130GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis7.50E-03
131GO:2001141: regulation of RNA biosynthetic process7.50E-03
132GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity7.50E-03
133GO:0006165: nucleoside diphosphate phosphorylation7.50E-03
134GO:0006228: UTP biosynthetic process7.50E-03
135GO:1902476: chloride transmembrane transport7.50E-03
136GO:0009052: pentose-phosphate shunt, non-oxidative branch7.50E-03
137GO:0009650: UV protection7.50E-03
138GO:0051513: regulation of monopolar cell growth7.50E-03
139GO:0009647: skotomorphogenesis7.50E-03
140GO:0009226: nucleotide-sugar biosynthetic process7.50E-03
141GO:0071484: cellular response to light intensity7.50E-03
142GO:0010731: protein glutathionylation7.50E-03
143GO:0006424: glutamyl-tRNA aminoacylation7.50E-03
144GO:0051085: chaperone mediated protein folding requiring cofactor7.50E-03
145GO:0009152: purine ribonucleotide biosynthetic process7.50E-03
146GO:0046739: transport of virus in multicellular host7.50E-03
147GO:0046653: tetrahydrofolate metabolic process7.50E-03
148GO:0045037: protein import into chloroplast stroma8.03E-03
149GO:0005986: sucrose biosynthetic process9.15E-03
150GO:0009828: plant-type cell wall loosening9.42E-03
151GO:0009416: response to light stimulus9.67E-03
152GO:0009765: photosynthesis, light harvesting1.02E-02
153GO:0045727: positive regulation of translation1.02E-02
154GO:0015994: chlorophyll metabolic process1.02E-02
155GO:0010037: response to carbon dioxide1.02E-02
156GO:0006808: regulation of nitrogen utilization1.02E-02
157GO:0044206: UMP salvage1.02E-02
158GO:2000122: negative regulation of stomatal complex development1.02E-02
159GO:0015976: carbon utilization1.02E-02
160GO:0030104: water homeostasis1.02E-02
161GO:0006021: inositol biosynthetic process1.02E-02
162GO:0010143: cutin biosynthetic process1.04E-02
163GO:0009664: plant-type cell wall organization1.15E-02
164GO:0010167: response to nitrate1.17E-02
165GO:0005985: sucrose metabolic process1.17E-02
166GO:0006833: water transport1.30E-02
167GO:0006564: L-serine biosynthetic process1.32E-02
168GO:0009247: glycolipid biosynthetic process1.32E-02
169GO:0010236: plastoquinone biosynthetic process1.32E-02
170GO:0034052: positive regulation of plant-type hypersensitive response1.32E-02
171GO:0031365: N-terminal protein amino acid modification1.32E-02
172GO:0035434: copper ion transmembrane transport1.32E-02
173GO:0016120: carotene biosynthetic process1.32E-02
174GO:0006508: proteolysis1.32E-02
175GO:0043097: pyrimidine nucleoside salvage1.32E-02
176GO:0009627: systemic acquired resistance1.37E-02
177GO:0042128: nitrate assimilation1.37E-02
178GO:0019344: cysteine biosynthetic process1.45E-02
179GO:0009768: photosynthesis, light harvesting in photosystem I1.61E-02
180GO:0006418: tRNA aminoacylation for protein translation1.61E-02
181GO:0007017: microtubule-based process1.61E-02
182GO:0009117: nucleotide metabolic process1.65E-02
183GO:0016554: cytidine to uridine editing1.65E-02
184GO:0010405: arabinogalactan protein metabolic process1.65E-02
185GO:0006206: pyrimidine nucleobase metabolic process1.65E-02
186GO:0032973: amino acid export1.65E-02
187GO:0018258: protein O-linked glycosylation via hydroxyproline1.65E-02
188GO:0046855: inositol phosphate dephosphorylation1.65E-02
189GO:0042793: transcription from plastid promoter1.65E-02
190GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1.65E-02
191GO:0009817: defense response to fungus, incompatible interaction1.67E-02
192GO:0006810: transport1.76E-02
193GO:0080167: response to karrikin1.89E-02
194GO:0007005: mitochondrion organization1.94E-02
195GO:0006694: steroid biosynthetic process2.00E-02
196GO:0010189: vitamin E biosynthetic process2.00E-02
197GO:0009854: oxidative photosynthetic carbon pathway2.00E-02
198GO:0042026: protein refolding2.00E-02
199GO:0010555: response to mannitol2.00E-02
200GO:0009612: response to mechanical stimulus2.00E-02
201GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2.00E-02
202GO:0009955: adaxial/abaxial pattern specification2.00E-02
203GO:0009411: response to UV2.12E-02
204GO:0008380: RNA splicing2.25E-02
205GO:0009853: photorespiration2.26E-02
206GO:0010444: guard mother cell differentiation2.38E-02
207GO:0006400: tRNA modification2.38E-02
208GO:0006614: SRP-dependent cotranslational protein targeting to membrane2.38E-02
209GO:0009610: response to symbiotic fungus2.38E-02
210GO:0050829: defense response to Gram-negative bacterium2.38E-02
211GO:0006821: chloride transport2.38E-02
212GO:0009395: phospholipid catabolic process2.38E-02
213GO:0043090: amino acid import2.38E-02
214GO:0034599: cellular response to oxidative stress2.39E-02
215GO:0016117: carotenoid biosynthetic process2.51E-02
216GO:0030001: metal ion transport2.67E-02
217GO:0042631: cellular response to water deprivation2.71E-02
218GO:0034220: ion transmembrane transport2.71E-02
219GO:0042335: cuticle development2.71E-02
220GO:0009690: cytokinin metabolic process2.78E-02
221GO:0006605: protein targeting2.78E-02
222GO:0019375: galactolipid biosynthetic process2.78E-02
223GO:0032508: DNA duplex unwinding2.78E-02
224GO:0005978: glycogen biosynthetic process2.78E-02
225GO:0009819: drought recovery2.78E-02
226GO:0009642: response to light intensity2.78E-02
227GO:0006644: phospholipid metabolic process2.78E-02
228GO:0043068: positive regulation of programmed cell death2.78E-02
229GO:0010114: response to red light3.11E-02
230GO:0015986: ATP synthesis coupled proton transport3.15E-02
231GO:0015996: chlorophyll catabolic process3.20E-02
232GO:0006526: arginine biosynthetic process3.20E-02
233GO:0007186: G-protein coupled receptor signaling pathway3.20E-02
234GO:0017004: cytochrome complex assembly3.20E-02
235GO:0009808: lignin metabolic process3.20E-02
236GO:0010497: plasmodesmata-mediated intercellular transport3.20E-02
237GO:0009932: cell tip growth3.20E-02
238GO:0071482: cellular response to light stimulus3.20E-02
239GO:0042546: cell wall biogenesis3.27E-02
240GO:0009826: unidimensional cell growth3.27E-02
241GO:0019252: starch biosynthetic process3.38E-02
242GO:0000302: response to reactive oxygen species3.62E-02
243GO:0009051: pentose-phosphate shunt, oxidative branch3.64E-02
244GO:0009245: lipid A biosynthetic process3.64E-02
245GO:0006754: ATP biosynthetic process3.64E-02
246GO:0000373: Group II intron splicing3.64E-02
247GO:0080144: amino acid homeostasis3.64E-02
248GO:0005975: carbohydrate metabolic process3.78E-02
249GO:0009790: embryo development3.82E-02
250GO:0010583: response to cyclopentenone3.86E-02
251GO:0006457: protein folding4.00E-02
252GO:0031425: chloroplast RNA processing4.10E-02
253GO:0006397: mRNA processing4.24E-02
254GO:0043069: negative regulation of programmed cell death4.58E-02
255GO:0006949: syncytium formation4.58E-02
256GO:0009870: defense response signaling pathway, resistance gene-dependent4.58E-02
257GO:0006535: cysteine biosynthetic process from serine4.58E-02
258GO:0045490: pectin catabolic process4.87E-02
259GO:0007623: circadian rhythm4.87E-02
RankGO TermAdjusted P value
1GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
2GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
3GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity0.00E+00
4GO:0050421: nitrite reductase (NO-forming) activity0.00E+00
5GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
6GO:0047513: 1,2-alpha-L-fucosidase activity0.00E+00
7GO:0004418: hydroxymethylbilane synthase activity0.00E+00
8GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity0.00E+00
9GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity0.00E+00
10GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
11GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
12GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
13GO:0015038: glutathione disulfide oxidoreductase activity0.00E+00
14GO:0046408: chlorophyll synthetase activity0.00E+00
15GO:0000979: RNA polymerase II core promoter sequence-specific DNA binding0.00E+00
16GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
17GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
18GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
19GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
20GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
21GO:0045435: lycopene epsilon cyclase activity0.00E+00
22GO:0004822: isoleucine-tRNA ligase activity0.00E+00
23GO:0004853: uroporphyrinogen decarboxylase activity0.00E+00
24GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
25GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
26GO:0005048: signal sequence binding0.00E+00
27GO:0008887: glycerate kinase activity0.00E+00
28GO:0047889: ferredoxin-nitrate reductase activity0.00E+00
29GO:0045550: geranylgeranyl reductase activity0.00E+00
30GO:0048307: ferredoxin-nitrite reductase activity0.00E+00
31GO:0050614: delta24-sterol reductase activity0.00E+00
32GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
33GO:0009974: zeinoxanthin epsilon hydroxylase activity0.00E+00
34GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
35GO:0019843: rRNA binding3.96E-25
36GO:0003735: structural constituent of ribosome3.70E-14
37GO:0003755: peptidyl-prolyl cis-trans isomerase activity7.21E-11
38GO:0005528: FK506 binding6.91E-08
39GO:0051920: peroxiredoxin activity4.32E-06
40GO:0016851: magnesium chelatase activity9.05E-06
41GO:0016209: antioxidant activity1.39E-05
42GO:0003959: NADPH dehydrogenase activity4.91E-05
43GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity7.23E-05
44GO:0016630: protochlorophyllide reductase activity7.23E-05
45GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity7.23E-05
46GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor2.15E-04
47GO:0004375: glycine dehydrogenase (decarboxylating) activity4.17E-04
48GO:0016168: chlorophyll binding5.57E-04
49GO:0004045: aminoacyl-tRNA hydrolase activity6.75E-04
50GO:0016279: protein-lysine N-methyltransferase activity6.75E-04
51GO:0003727: single-stranded RNA binding6.98E-04
52GO:0003989: acetyl-CoA carboxylase activity9.88E-04
53GO:0031072: heat shock protein binding1.26E-03
54GO:0008200: ion channel inhibitor activity1.36E-03
55GO:0004130: cytochrome-c peroxidase activity1.36E-03
56GO:0004366: glycerol-3-phosphate O-acyltransferase activity1.36E-03
57GO:0004560: alpha-L-fucosidase activity1.38E-03
58GO:0015200: methylammonium transmembrane transporter activity1.38E-03
59GO:0004807: triose-phosphate isomerase activity1.38E-03
60GO:0004832: valine-tRNA ligase activity1.38E-03
61GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity1.38E-03
62GO:0004828: serine-tRNA ligase activity1.38E-03
63GO:0080132: fatty acid alpha-hydroxylase activity1.38E-03
64GO:0004328: formamidase activity1.38E-03
65GO:0004655: porphobilinogen synthase activity1.38E-03
66GO:0010347: L-galactose-1-phosphate phosphatase activity1.38E-03
67GO:0009671: nitrate:proton symporter activity1.38E-03
68GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity1.38E-03
69GO:0045485: omega-6 fatty acid desaturase activity1.38E-03
70GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity1.38E-03
71GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity1.38E-03
72GO:0000170: sphingosine hydroxylase activity1.38E-03
73GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity1.38E-03
74GO:0009374: biotin binding1.38E-03
75GO:0030794: (S)-coclaurine-N-methyltransferase activity1.38E-03
76GO:0008266: poly(U) RNA binding1.47E-03
77GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity1.81E-03
78GO:0005509: calcium ion binding1.92E-03
79GO:0016597: amino acid binding2.28E-03
80GO:0051537: 2 iron, 2 sulfur cluster binding2.28E-03
81GO:0016491: oxidoreductase activity2.84E-03
82GO:0004033: aldo-keto reductase (NADP) activity2.91E-03
83GO:0008883: glutamyl-tRNA reductase activity3.06E-03
84GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity3.06E-03
85GO:0042284: sphingolipid delta-4 desaturase activity3.06E-03
86GO:0008934: inositol monophosphate 1-phosphatase activity3.06E-03
87GO:0047746: chlorophyllase activity3.06E-03
88GO:0042389: omega-3 fatty acid desaturase activity3.06E-03
89GO:0052833: inositol monophosphate 4-phosphatase activity3.06E-03
90GO:0010297: heteropolysaccharide binding3.06E-03
91GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity3.06E-03
92GO:0009977: proton motive force dependent protein transmembrane transporter activity3.06E-03
93GO:0004617: phosphoglycerate dehydrogenase activity3.06E-03
94GO:0008967: phosphoglycolate phosphatase activity3.06E-03
95GO:0003938: IMP dehydrogenase activity3.06E-03
96GO:0004047: aminomethyltransferase activity3.06E-03
97GO:0004614: phosphoglucomutase activity3.06E-03
98GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity3.06E-03
99GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase3.06E-03
100GO:0052832: inositol monophosphate 3-phosphatase activity3.06E-03
101GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water3.58E-03
102GO:0004601: peroxidase activity4.26E-03
103GO:0016788: hydrolase activity, acting on ester bonds4.44E-03
104GO:0010277: chlorophyllide a oxygenase [overall] activity5.11E-03
105GO:0004075: biotin carboxylase activity5.11E-03
106GO:0016531: copper chaperone activity5.11E-03
107GO:0004751: ribose-5-phosphate isomerase activity5.11E-03
108GO:0045174: glutathione dehydrogenase (ascorbate) activity5.11E-03
109GO:0070330: aromatase activity5.11E-03
110GO:0030267: glyoxylate reductase (NADP) activity5.11E-03
111GO:0019829: cation-transporting ATPase activity5.11E-03
112GO:0017150: tRNA dihydrouridine synthase activity5.11E-03
113GO:0050734: hydroxycinnamoyltransferase activity5.11E-03
114GO:0016742: hydroxymethyl-, formyl- and related transferase activity5.11E-03
115GO:0002161: aminoacyl-tRNA editing activity5.11E-03
116GO:0070402: NADPH binding5.11E-03
117GO:0004148: dihydrolipoyl dehydrogenase activity5.11E-03
118GO:0008864: formyltetrahydrofolate deformylase activity5.11E-03
119GO:0004324: ferredoxin-NADP+ reductase activity5.11E-03
120GO:0003993: acid phosphatase activity5.84E-03
121GO:0016762: xyloglucan:xyloglucosyl transferase activity7.34E-03
122GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity7.50E-03
123GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides7.50E-03
124GO:0004550: nucleoside diphosphate kinase activity7.50E-03
125GO:0043023: ribosomal large subunit binding7.50E-03
126GO:0008097: 5S rRNA binding7.50E-03
127GO:0035529: NADH pyrophosphatase activity7.50E-03
128GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor7.50E-03
129GO:0035250: UDP-galactosyltransferase activity7.50E-03
130GO:0016149: translation release factor activity, codon specific7.50E-03
131GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds8.44E-03
132GO:0052689: carboxylic ester hydrolase activity8.48E-03
133GO:0005253: anion channel activity1.02E-02
134GO:0016987: sigma factor activity1.02E-02
135GO:1990137: plant seed peroxidase activity1.02E-02
136GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity1.02E-02
137GO:0046556: alpha-L-arabinofuranosidase activity1.02E-02
138GO:0015204: urea transmembrane transporter activity1.02E-02
139GO:0004659: prenyltransferase activity1.02E-02
140GO:0001053: plastid sigma factor activity1.02E-02
141GO:0043495: protein anchor1.02E-02
142GO:0004845: uracil phosphoribosyltransferase activity1.02E-02
143GO:0004345: glucose-6-phosphate dehydrogenase activity1.02E-02
144GO:0016836: hydro-lyase activity1.02E-02
145GO:0009044: xylan 1,4-beta-xylosidase activity1.02E-02
146GO:0051287: NAD binding1.08E-02
147GO:0015250: water channel activity1.18E-02
148GO:0031409: pigment binding1.30E-02
149GO:0018685: alkane 1-monooxygenase activity1.32E-02
150GO:0016773: phosphotransferase activity, alcohol group as acceptor1.32E-02
151GO:0004040: amidase activity1.32E-02
152GO:0008725: DNA-3-methyladenine glycosylase activity1.32E-02
153GO:0030414: peptidase inhibitor activity1.32E-02
154GO:0004623: phospholipase A2 activity1.32E-02
155GO:0003690: double-stranded DNA binding1.35E-02
156GO:0016798: hydrolase activity, acting on glycosyl bonds1.46E-02
157GO:0003723: RNA binding1.52E-02
158GO:0008236: serine-type peptidase activity1.56E-02
159GO:0043424: protein histidine kinase binding1.61E-02
160GO:0016462: pyrophosphatase activity1.65E-02
161GO:0016688: L-ascorbate peroxidase activity1.65E-02
162GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity1.65E-02
163GO:0008519: ammonium transmembrane transporter activity1.65E-02
164GO:0005247: voltage-gated chloride channel activity1.65E-02
165GO:0042578: phosphoric ester hydrolase activity1.65E-02
166GO:0080030: methyl indole-3-acetate esterase activity1.65E-02
167GO:0031177: phosphopantetheine binding1.65E-02
168GO:1990714: hydroxyproline O-galactosyltransferase activity1.65E-02
169GO:0016208: AMP binding1.65E-02
170GO:0004176: ATP-dependent peptidase activity1.77E-02
171GO:0004222: metalloendopeptidase activity1.89E-02
172GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.00E-02
173GO:0051753: mannan synthase activity2.00E-02
174GO:0004017: adenylate kinase activity2.00E-02
175GO:0004849: uridine kinase activity2.00E-02
176GO:0004124: cysteine synthase activity2.00E-02
177GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity2.00E-02
178GO:0000035: acyl binding2.00E-02
179GO:0022891: substrate-specific transmembrane transporter activity2.12E-02
180GO:0030570: pectate lyase activity2.12E-02
181GO:0051082: unfolded protein binding2.18E-02
182GO:0003756: protein disulfide isomerase activity2.31E-02
183GO:0043295: glutathione binding2.38E-02
184GO:0019899: enzyme binding2.38E-02
185GO:0008235: metalloexopeptidase activity2.38E-02
186GO:0004812: aminoacyl-tRNA ligase activity2.51E-02
187GO:0050661: NADP binding2.67E-02
188GO:0008312: 7S RNA binding2.78E-02
189GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process2.78E-02
190GO:0004034: aldose 1-epimerase activity2.78E-02
191GO:0004564: beta-fructofuranosidase activity2.78E-02
192GO:0046933: proton-transporting ATP synthase activity, rotational mechanism2.92E-02
193GO:0004364: glutathione transferase activity2.96E-02
194GO:0005375: copper ion transmembrane transporter activity3.20E-02
195GO:0004252: serine-type endopeptidase activity3.55E-02
196GO:0003747: translation release factor activity3.64E-02
197GO:0004575: sucrose alpha-glucosidase activity4.10E-02
198GO:0005381: iron ion transmembrane transporter activity4.10E-02
199GO:0015112: nitrate transmembrane transporter activity4.10E-02
200GO:0000156: phosphorelay response regulator activity4.12E-02
201GO:0009055: electron carrier activity4.46E-02
202GO:0004805: trehalose-phosphatase activity4.58E-02
203GO:0030234: enzyme regulator activity4.58E-02
204GO:0008047: enzyme activator activity4.58E-02
205GO:0005200: structural constituent of cytoskeleton4.65E-02
206GO:0008483: transaminase activity4.65E-02
207GO:0016722: oxidoreductase activity, oxidizing metal ions4.65E-02
208GO:0008237: metallopeptidase activity4.65E-02
RankGO TermAdjusted P value
1GO:0009515: granal stacked thylakoid0.00E+00
2GO:0005835: fatty acid synthase complex0.00E+00
3GO:0009344: nitrite reductase complex [NAD(P)H]0.00E+00
4GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex0.00E+00
5GO:0009575: chromoplast stroma0.00E+00
6GO:0005943: phosphatidylinositol 3-kinase complex, class IA0.00E+00
7GO:0044391: ribosomal subunit0.00E+00
8GO:0009507: chloroplast2.26E-152
9GO:0009570: chloroplast stroma3.02E-88
10GO:0009535: chloroplast thylakoid membrane7.12E-73
11GO:0009941: chloroplast envelope3.87E-71
12GO:0009579: thylakoid1.41E-59
13GO:0009534: chloroplast thylakoid7.44E-54
14GO:0009543: chloroplast thylakoid lumen5.42E-44
15GO:0031977: thylakoid lumen5.18E-28
16GO:0005840: ribosome1.74E-16
17GO:0009654: photosystem II oxygen evolving complex6.48E-16
18GO:0019898: extrinsic component of membrane5.65E-12
19GO:0030095: chloroplast photosystem II4.21E-10
20GO:0048046: apoplast5.99E-10
21GO:0031969: chloroplast membrane6.24E-09
22GO:0010319: stromule3.80E-07
23GO:0009505: plant-type cell wall1.64E-06
24GO:0010007: magnesium chelatase complex2.03E-06
25GO:0009706: chloroplast inner membrane2.25E-06
26GO:0009536: plastid5.48E-06
27GO:0000311: plastid large ribosomal subunit6.84E-06
28GO:0016020: membrane1.32E-05
29GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)3.34E-05
30GO:0042651: thylakoid membrane4.08E-05
31GO:0009295: nucleoid5.85E-05
32GO:0000427: plastid-encoded plastid RNA polymerase complex7.23E-05
33GO:0005618: cell wall7.58E-05
34GO:0009508: plastid chromosome1.49E-04
35GO:0009533: chloroplast stromal thylakoid2.00E-04
36GO:0005960: glycine cleavage complex4.17E-04
37GO:0015934: large ribosomal subunit1.06E-03
38GO:0009523: photosystem II1.25E-03
39GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)1.36E-03
40GO:0009782: photosystem I antenna complex1.38E-03
41GO:0043674: columella1.38E-03
42GO:0009547: plastid ribosome1.38E-03
43GO:0000312: plastid small ribosomal subunit1.47E-03
44GO:0042807: central vacuole2.33E-03
45GO:0010287: plastoglobule2.48E-03
46GO:0030529: intracellular ribonucleoprotein complex2.49E-03
47GO:0015935: small ribosomal subunit2.92E-03
48GO:0046658: anchored component of plasma membrane3.02E-03
49GO:0042170: plastid membrane3.06E-03
50GO:0080085: signal recognition particle, chloroplast targeting3.06E-03
51GO:0045298: tubulin complex4.31E-03
52GO:0009528: plastid inner membrane5.11E-03
53GO:0009509: chromoplast5.11E-03
54GO:0033281: TAT protein transport complex5.11E-03
55GO:0009317: acetyl-CoA carboxylase complex5.11E-03
56GO:0031225: anchored component of membrane5.84E-03
57GO:0009522: photosystem I6.13E-03
58GO:0042646: plastid nucleoid7.50E-03
59GO:0009531: secondary cell wall7.50E-03
60GO:0005775: vacuolar lumen7.50E-03
61GO:0032040: small-subunit processome8.03E-03
62GO:0009544: chloroplast ATP synthase complex1.02E-02
63GO:0009527: plastid outer membrane1.02E-02
64GO:0030076: light-harvesting complex1.17E-02
65GO:0034707: chloride channel complex1.65E-02
66GO:0009707: chloroplast outer membrane1.67E-02
67GO:0009532: plastid stroma1.77E-02
68GO:0016363: nuclear matrix2.00E-02
69GO:0022626: cytosolic ribosome2.06E-02
70GO:0009538: photosystem I reaction center2.78E-02
71GO:0005786: signal recognition particle, endoplasmic reticulum targeting3.20E-02
72GO:0005811: lipid particle3.20E-02
73GO:0000326: protein storage vacuole3.20E-02
74GO:0009539: photosystem II reaction center3.20E-02
75GO:0005763: mitochondrial small ribosomal subunit3.64E-02
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Gene type



Gene DE type