GO Enrichment Analysis of Co-expressed Genes with
AT1G35420
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 2 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 3 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 4 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 5 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 6 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.60E-05 |
| 7 | GO:0010480: microsporocyte differentiation | 2.00E-04 |
| 8 | GO:0031338: regulation of vesicle fusion | 2.00E-04 |
| 9 | GO:0000481: maturation of 5S rRNA | 2.00E-04 |
| 10 | GO:2000021: regulation of ion homeostasis | 2.00E-04 |
| 11 | GO:0010028: xanthophyll cycle | 2.00E-04 |
| 12 | GO:0034337: RNA folding | 2.00E-04 |
| 13 | GO:0000476: maturation of 4.5S rRNA | 2.00E-04 |
| 14 | GO:0000967: rRNA 5'-end processing | 2.00E-04 |
| 15 | GO:0015808: L-alanine transport | 2.00E-04 |
| 16 | GO:0043266: regulation of potassium ion transport | 2.00E-04 |
| 17 | GO:0048507: meristem development | 2.49E-04 |
| 18 | GO:0010206: photosystem II repair | 2.49E-04 |
| 19 | GO:0006535: cysteine biosynthetic process from serine | 3.48E-04 |
| 20 | GO:0009773: photosynthetic electron transport in photosystem I | 4.04E-04 |
| 21 | GO:0098712: L-glutamate import across plasma membrane | 4.48E-04 |
| 22 | GO:0016122: xanthophyll metabolic process | 4.48E-04 |
| 23 | GO:0010270: photosystem II oxygen evolving complex assembly | 4.48E-04 |
| 24 | GO:0015804: neutral amino acid transport | 4.48E-04 |
| 25 | GO:0034470: ncRNA processing | 4.48E-04 |
| 26 | GO:0055129: L-proline biosynthetic process | 4.48E-04 |
| 27 | GO:1900871: chloroplast mRNA modification | 4.48E-04 |
| 28 | GO:0090630: activation of GTPase activity | 7.29E-04 |
| 29 | GO:2001295: malonyl-CoA biosynthetic process | 7.29E-04 |
| 30 | GO:0006518: peptide metabolic process | 7.29E-04 |
| 31 | GO:0008152: metabolic process | 7.34E-04 |
| 32 | GO:0019344: cysteine biosynthetic process | 8.13E-04 |
| 33 | GO:0061077: chaperone-mediated protein folding | 9.79E-04 |
| 34 | GO:0046836: glycolipid transport | 1.04E-03 |
| 35 | GO:0051639: actin filament network formation | 1.04E-03 |
| 36 | GO:0009152: purine ribonucleotide biosynthetic process | 1.04E-03 |
| 37 | GO:0046653: tetrahydrofolate metabolic process | 1.04E-03 |
| 38 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 1.38E-03 |
| 39 | GO:0010021: amylopectin biosynthetic process | 1.38E-03 |
| 40 | GO:0051781: positive regulation of cell division | 1.38E-03 |
| 41 | GO:0051764: actin crosslink formation | 1.38E-03 |
| 42 | GO:0045727: positive regulation of translation | 1.38E-03 |
| 43 | GO:0015994: chlorophyll metabolic process | 1.38E-03 |
| 44 | GO:0031122: cytoplasmic microtubule organization | 1.38E-03 |
| 45 | GO:0048497: maintenance of floral organ identity | 1.76E-03 |
| 46 | GO:0016120: carotene biosynthetic process | 1.76E-03 |
| 47 | GO:0045454: cell redox homeostasis | 2.10E-03 |
| 48 | GO:0006561: proline biosynthetic process | 2.17E-03 |
| 49 | GO:0042549: photosystem II stabilization | 2.17E-03 |
| 50 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2.17E-03 |
| 51 | GO:0000470: maturation of LSU-rRNA | 2.17E-03 |
| 52 | GO:0006828: manganese ion transport | 2.17E-03 |
| 53 | GO:0009913: epidermal cell differentiation | 2.17E-03 |
| 54 | GO:0042026: protein refolding | 2.60E-03 |
| 55 | GO:0006458: 'de novo' protein folding | 2.60E-03 |
| 56 | GO:0009942: longitudinal axis specification | 2.60E-03 |
| 57 | GO:0043090: amino acid import | 3.06E-03 |
| 58 | GO:0048437: floral organ development | 3.06E-03 |
| 59 | GO:0010196: nonphotochemical quenching | 3.06E-03 |
| 60 | GO:0032508: DNA duplex unwinding | 3.55E-03 |
| 61 | GO:0010492: maintenance of shoot apical meristem identity | 3.55E-03 |
| 62 | GO:0008610: lipid biosynthetic process | 3.55E-03 |
| 63 | GO:0030091: protein repair | 3.55E-03 |
| 64 | GO:0032544: plastid translation | 4.06E-03 |
| 65 | GO:0071482: cellular response to light stimulus | 4.06E-03 |
| 66 | GO:0055114: oxidation-reduction process | 5.11E-03 |
| 67 | GO:0006779: porphyrin-containing compound biosynthetic process | 5.15E-03 |
| 68 | GO:0045036: protein targeting to chloroplast | 5.74E-03 |
| 69 | GO:0006782: protoporphyrinogen IX biosynthetic process | 5.74E-03 |
| 70 | GO:0019538: protein metabolic process | 5.74E-03 |
| 71 | GO:1903507: negative regulation of nucleic acid-templated transcription | 6.34E-03 |
| 72 | GO:0018119: peptidyl-cysteine S-nitrosylation | 6.34E-03 |
| 73 | GO:0048229: gametophyte development | 6.34E-03 |
| 74 | GO:0046856: phosphatidylinositol dephosphorylation | 6.34E-03 |
| 75 | GO:0006816: calcium ion transport | 6.34E-03 |
| 76 | GO:0006855: drug transmembrane transport | 6.93E-03 |
| 77 | GO:0005983: starch catabolic process | 6.96E-03 |
| 78 | GO:0042538: hyperosmotic salinity response | 7.46E-03 |
| 79 | GO:0018107: peptidyl-threonine phosphorylation | 7.61E-03 |
| 80 | GO:0010075: regulation of meristem growth | 7.61E-03 |
| 81 | GO:0009767: photosynthetic electron transport chain | 7.61E-03 |
| 82 | GO:0010102: lateral root morphogenesis | 7.61E-03 |
| 83 | GO:0006364: rRNA processing | 8.01E-03 |
| 84 | GO:0009934: regulation of meristem structural organization | 8.28E-03 |
| 85 | GO:0010207: photosystem II assembly | 8.28E-03 |
| 86 | GO:0051017: actin filament bundle assembly | 1.04E-02 |
| 87 | GO:0008299: isoprenoid biosynthetic process | 1.12E-02 |
| 88 | GO:0016575: histone deacetylation | 1.12E-02 |
| 89 | GO:0018105: peptidyl-serine phosphorylation | 1.18E-02 |
| 90 | GO:0005975: carbohydrate metabolic process | 1.20E-02 |
| 91 | GO:0046686: response to cadmium ion | 1.25E-02 |
| 92 | GO:0080092: regulation of pollen tube growth | 1.27E-02 |
| 93 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.27E-02 |
| 94 | GO:0010051: xylem and phloem pattern formation | 1.60E-02 |
| 95 | GO:0048653: anther development | 1.60E-02 |
| 96 | GO:0006662: glycerol ether metabolic process | 1.69E-02 |
| 97 | GO:0010305: leaf vascular tissue pattern formation | 1.69E-02 |
| 98 | GO:0006633: fatty acid biosynthetic process | 1.80E-02 |
| 99 | GO:0019252: starch biosynthetic process | 1.87E-02 |
| 100 | GO:0009791: post-embryonic development | 1.87E-02 |
| 101 | GO:0048825: cotyledon development | 1.87E-02 |
| 102 | GO:1901657: glycosyl compound metabolic process | 2.16E-02 |
| 103 | GO:0030163: protein catabolic process | 2.16E-02 |
| 104 | GO:0010027: thylakoid membrane organization | 2.55E-02 |
| 105 | GO:0016126: sterol biosynthetic process | 2.55E-02 |
| 106 | GO:0009816: defense response to bacterium, incompatible interaction | 2.66E-02 |
| 107 | GO:0015995: chlorophyll biosynthetic process | 2.87E-02 |
| 108 | GO:0009817: defense response to fungus, incompatible interaction | 3.09E-02 |
| 109 | GO:0006810: transport | 3.53E-02 |
| 110 | GO:0009723: response to ethylene | 3.55E-02 |
| 111 | GO:0009853: photorespiration | 3.65E-02 |
| 112 | GO:0006457: protein folding | 3.74E-02 |
| 113 | GO:0034599: cellular response to oxidative stress | 3.77E-02 |
| 114 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.93E-02 |
| 115 | GO:0046777: protein autophosphorylation | 4.06E-02 |
| 116 | GO:0006631: fatty acid metabolic process | 4.13E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 2 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 3 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 4 | GO:0004561: alpha-N-acetylglucosaminidase activity | 0.00E+00 |
| 5 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 6 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 7 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 8 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 9 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 10 | GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity | 0.00E+00 |
| 11 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 12 | GO:0005528: FK506 binding | 1.10E-06 |
| 13 | GO:0050017: L-3-cyanoalanine synthase activity | 1.89E-06 |
| 14 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 6.90E-06 |
| 15 | GO:0051861: glycolipid binding | 2.94E-05 |
| 16 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 2.94E-05 |
| 17 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 9.69E-05 |
| 18 | GO:0004124: cysteine synthase activity | 9.69E-05 |
| 19 | GO:0004163: diphosphomevalonate decarboxylase activity | 2.00E-04 |
| 20 | GO:0030941: chloroplast targeting sequence binding | 2.00E-04 |
| 21 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 2.00E-04 |
| 22 | GO:0015194: L-serine transmembrane transporter activity | 2.00E-04 |
| 23 | GO:0004349: glutamate 5-kinase activity | 2.00E-04 |
| 24 | GO:0050308: sugar-phosphatase activity | 2.00E-04 |
| 25 | GO:0004350: glutamate-5-semialdehyde dehydrogenase activity | 2.00E-04 |
| 26 | GO:0004856: xylulokinase activity | 2.00E-04 |
| 27 | GO:0008568: microtubule-severing ATPase activity | 2.00E-04 |
| 28 | GO:0019203: carbohydrate phosphatase activity | 2.00E-04 |
| 29 | GO:0015180: L-alanine transmembrane transporter activity | 4.48E-04 |
| 30 | GO:0016868: intramolecular transferase activity, phosphotransferases | 4.48E-04 |
| 31 | GO:0033201: alpha-1,4-glucan synthase activity | 4.48E-04 |
| 32 | GO:0004075: biotin carboxylase activity | 7.29E-04 |
| 33 | GO:0030267: glyoxylate reductase (NADP) activity | 7.29E-04 |
| 34 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 7.29E-04 |
| 35 | GO:0070402: NADPH binding | 7.29E-04 |
| 36 | GO:0008864: formyltetrahydrofolate deformylase activity | 7.29E-04 |
| 37 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 7.29E-04 |
| 38 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 7.29E-04 |
| 39 | GO:0004373: glycogen (starch) synthase activity | 7.29E-04 |
| 40 | GO:0004148: dihydrolipoyl dehydrogenase activity | 7.29E-04 |
| 41 | GO:0015193: L-proline transmembrane transporter activity | 7.29E-04 |
| 42 | GO:0017089: glycolipid transporter activity | 1.04E-03 |
| 43 | GO:0015186: L-glutamine transmembrane transporter activity | 1.04E-03 |
| 44 | GO:0019201: nucleotide kinase activity | 1.04E-03 |
| 45 | GO:0015175: neutral amino acid transmembrane transporter activity | 1.04E-03 |
| 46 | GO:0004445: inositol-polyphosphate 5-phosphatase activity | 1.04E-03 |
| 47 | GO:0048487: beta-tubulin binding | 1.04E-03 |
| 48 | GO:0005313: L-glutamate transmembrane transporter activity | 1.38E-03 |
| 49 | GO:0009011: starch synthase activity | 1.38E-03 |
| 50 | GO:0003989: acetyl-CoA carboxylase activity | 1.76E-03 |
| 51 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.76E-03 |
| 52 | GO:0017137: Rab GTPase binding | 1.76E-03 |
| 53 | GO:0048038: quinone binding | 1.95E-03 |
| 54 | GO:2001070: starch binding | 2.17E-03 |
| 55 | GO:0042578: phosphoric ester hydrolase activity | 2.17E-03 |
| 56 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 2.17E-03 |
| 57 | GO:0016787: hydrolase activity | 2.30E-03 |
| 58 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 2.60E-03 |
| 59 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.60E-03 |
| 60 | GO:0004017: adenylate kinase activity | 2.60E-03 |
| 61 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.60E-03 |
| 62 | GO:0008236: serine-type peptidase activity | 3.47E-03 |
| 63 | GO:0004033: aldo-keto reductase (NADP) activity | 3.55E-03 |
| 64 | GO:0043022: ribosome binding | 3.55E-03 |
| 65 | GO:0015238: drug transmembrane transporter activity | 3.83E-03 |
| 66 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 4.06E-03 |
| 67 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 4.60E-03 |
| 68 | GO:0042802: identical protein binding | 4.75E-03 |
| 69 | GO:0047617: acyl-CoA hydrolase activity | 5.15E-03 |
| 70 | GO:0005384: manganese ion transmembrane transporter activity | 5.15E-03 |
| 71 | GO:0016788: hydrolase activity, acting on ester bonds | 6.24E-03 |
| 72 | GO:0044183: protein binding involved in protein folding | 6.34E-03 |
| 73 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 6.34E-03 |
| 74 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 6.96E-03 |
| 75 | GO:0015095: magnesium ion transmembrane transporter activity | 7.61E-03 |
| 76 | GO:0004565: beta-galactosidase activity | 7.61E-03 |
| 77 | GO:0004022: alcohol dehydrogenase (NAD) activity | 7.61E-03 |
| 78 | GO:0008266: poly(U) RNA binding | 8.28E-03 |
| 79 | GO:0016491: oxidoreductase activity | 9.36E-03 |
| 80 | GO:0004407: histone deacetylase activity | 1.04E-02 |
| 81 | GO:0003714: transcription corepressor activity | 1.04E-02 |
| 82 | GO:0033612: receptor serine/threonine kinase binding | 1.19E-02 |
| 83 | GO:0019843: rRNA binding | 1.43E-02 |
| 84 | GO:0047134: protein-disulfide reductase activity | 1.52E-02 |
| 85 | GO:0004252: serine-type endopeptidase activity | 1.59E-02 |
| 86 | GO:0030170: pyridoxal phosphate binding | 1.59E-02 |
| 87 | GO:0004791: thioredoxin-disulfide reductase activity | 1.78E-02 |
| 88 | GO:0016853: isomerase activity | 1.78E-02 |
| 89 | GO:0005509: calcium ion binding | 1.78E-02 |
| 90 | GO:0050662: coenzyme binding | 1.78E-02 |
| 91 | GO:0015297: antiporter activity | 1.89E-02 |
| 92 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.16E-02 |
| 93 | GO:0051015: actin filament binding | 2.16E-02 |
| 94 | GO:0003743: translation initiation factor activity | 2.32E-02 |
| 95 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 2.76E-02 |
| 96 | GO:0004683: calmodulin-dependent protein kinase activity | 2.87E-02 |
| 97 | GO:0102483: scopolin beta-glucosidase activity | 2.87E-02 |
| 98 | GO:0004721: phosphoprotein phosphatase activity | 2.87E-02 |
| 99 | GO:0008168: methyltransferase activity | 2.95E-02 |
| 100 | GO:0005096: GTPase activator activity | 3.20E-02 |
| 101 | GO:0004222: metalloendopeptidase activity | 3.31E-02 |
| 102 | GO:0030145: manganese ion binding | 3.42E-02 |
| 103 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.42E-02 |
| 104 | GO:0050897: cobalt ion binding | 3.42E-02 |
| 105 | GO:0050660: flavin adenine dinucleotide binding | 3.55E-02 |
| 106 | GO:0003746: translation elongation factor activity | 3.65E-02 |
| 107 | GO:0005524: ATP binding | 3.79E-02 |
| 108 | GO:0016301: kinase activity | 3.88E-02 |
| 109 | GO:0008422: beta-glucosidase activity | 3.89E-02 |
| 110 | GO:0052689: carboxylic ester hydrolase activity | 4.19E-02 |
| 111 | GO:0043621: protein self-association | 4.62E-02 |
| 112 | GO:0015293: symporter activity | 4.75E-02 |
| 113 | GO:0004871: signal transducer activity | 4.75E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.02E-31 |
| 2 | GO:0009534: chloroplast thylakoid | 6.81E-16 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 9.75E-16 |
| 4 | GO:0009570: chloroplast stroma | 2.89E-15 |
| 5 | GO:0009941: chloroplast envelope | 9.97E-12 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 5.15E-09 |
| 7 | GO:0031977: thylakoid lumen | 3.76E-06 |
| 8 | GO:0009579: thylakoid | 1.78E-05 |
| 9 | GO:0010287: plastoglobule | 3.50E-05 |
| 10 | GO:0009344: nitrite reductase complex [NAD(P)H] | 2.00E-04 |
| 11 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.49E-04 |
| 12 | GO:0030095: chloroplast photosystem II | 5.92E-04 |
| 13 | GO:0042651: thylakoid membrane | 8.95E-04 |
| 14 | GO:0032432: actin filament bundle | 1.04E-03 |
| 15 | GO:0031359: integral component of chloroplast outer membrane | 3.06E-03 |
| 16 | GO:0009533: chloroplast stromal thylakoid | 3.06E-03 |
| 17 | GO:0009501: amyloplast | 3.55E-03 |
| 18 | GO:0005884: actin filament | 6.34E-03 |
| 19 | GO:0032040: small-subunit processome | 6.96E-03 |
| 20 | GO:0031969: chloroplast membrane | 8.02E-03 |
| 21 | GO:0009654: photosystem II oxygen evolving complex | 1.12E-02 |
| 22 | GO:0019898: extrinsic component of membrane | 1.87E-02 |
| 23 | GO:0009707: chloroplast outer membrane | 3.09E-02 |